RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 SERPINA5P05154 406 aa12.15□□□□□ -0.46
CPSF1-201ENST00000526271 ERCC1P07992 297 aaPredicted RBP12.15□□□□□ -0.46
CPSF1-201ENST00000526271 FAM157BP0CG42 384 aa12.15□□□□□ -0.46
CPSF1-201ENST00000526271 ETS2P15036 469 aa12.15□□□□□ -0.46
CPSF1-201ENST00000526271 GTF2E2P29084 291 aaKnown RBP12.15□□□□□ -0.46
CPSF1-201ENST00000526271 ACTG1P63261 375 aa12.15□□□□□ -0.46
CPSF1-201ENST00000526271 CBX1P83916 185 aa12.15□□□□□ -0.46
CPSF1-201ENST00000526271 PUDPQ08623 228 aa12.15□□□□□ -0.46
CPSF1-201ENST00000526271 PAGE3Q5JUK9 113 aa12.15□□□□□ -0.46
CPSF1-201ENST00000526271 LRIF1Q5T3J3 769 aa12.15□□□□□ -0.46
CPSF1-201ENST00000526271 FAM91A1Q658Y4 838 aa12.15□□□□□ -0.46
CPSF1-201ENST00000526271 FAHD2BQ6P2I3 314 aaPredicted RBP12.15□□□□□ -0.46
CPSF1-201ENST00000526271 C1QL2Q7Z5L3 287 aa12.15□□□□□ -0.46
CPSF1-201ENST00000526271 NET1Q7Z628 596 aaPredicted RBP12.15□□□□□ -0.46
CPSF1-201ENST00000526271 RNF217Q8TC41 542 aa12.15□□□□□ -0.46
CPSF1-201ENST00000526271 DVL3Q92997 716 aaPredicted RBP12.15□□□□□ -0.46
CPSF1-201ENST00000526271 FAHD2AQ96GK7 314 aa12.15□□□□□ -0.46
CPSF1-201ENST00000526271 C1orf147Q96MC9 270 aaPredicted RBP12.15□□□□□ -0.46
CPSF1-201ENST00000526271 SH3GL3Q99963 347 aa12.15□□□□□ -0.46
CPSF1-201ENST00000526271 C1QTNF5Q9BXJ0 243 aa12.15□□□□□ -0.46
CPSF1-201ENST00000526271 ULBP2Q9BZM5 246 aa12.15□□□□□ -0.46
CPSF1-201ENST00000526271 OR51B6Q9H340 312 aa12.15□□□□□ -0.46
CPSF1-201ENST00000526271 TAS2R5Q9NYW4 299 aa12.15□□□□□ -0.46
CPSF1-201ENST00000526271 VAPAQ9P0L0 249 aa12.15□□□□□ -0.46
CPSF1-201ENST00000526271 DUSP13Q9UII6 198 aa12.15□□□□□ -0.46
CPSF1-201ENST00000526271 C17orf100A8MU93 164 aa12.14□□□□□ -0.47
CPSF1-201ENST00000526271 VSTM5A8MXK1 200 aa12.14□□□□□ -0.47
CPSF1-201ENST00000526271 SERPINI2O75830 405 aa12.14□□□□□ -0.47
CPSF1-201ENST00000526271 PNPP00491 289 aa12.14□□□□□ -0.47
CPSF1-201ENST00000526271 IGHV2-5P01817 119 aa12.14□□□□□ -0.47
CPSF1-201ENST00000526271 NQO1P15559 274 aaKnown RBP12.14□□□□□ -0.47
CPSF1-201ENST00000526271 ZNF250P15622 560 aa12.14□□□□□ -0.47
CPSF1-201ENST00000526271 BIDP55957 195 aa12.14□□□□□ -0.47
CPSF1-201ENST00000526271 CCL8P80075 99 aa12.14□□□□□ -0.47
CPSF1-201ENST00000526271 MVKQ03426 396 aa12.14□□□□□ -0.47
CPSF1-201ENST00000526271 FADDQ13158 208 aa12.14□□□□□ -0.47
CPSF1-201ENST00000526271 TRMT5Q32P41 509 aaKnown RBP12.14□□□□□ -0.47
CPSF1-201ENST00000526271 C6orf10Q5SRN2 563 aa12.14□□□□□ -0.47
CPSF1-201ENST00000526271 ULK3Q6PHR2 472 aa12.14□□□□□ -0.47
CPSF1-201ENST00000526271 UGT2A3Q6UWM9 527 aa12.14□□□□□ -0.47
CPSF1-201ENST00000526271 PXKQ7Z7A4 578 aa12.14□□□□□ -0.47
CPSF1-201ENST00000526271 LRRC17Q8N6Y2 441 aa12.14□□□□□ -0.47
CPSF1-201ENST00000526271 GPR32P1Q8NGA4 272 aa12.14□□□□□ -0.47
CPSF1-201ENST00000526271 DNAJA4Q8WW22 397 aaPredicted RBP12.14□□□□□ -0.47
CPSF1-201ENST00000526271 TAF15Q92804 592 aaKnown RBP eCLIP12.14□□□□□ -0.47
CPSF1-201ENST00000526271 SPDL1Q96EA4 605 aa12.14□□□□□ -0.47
CPSF1-201ENST00000526271 ZNF665Q9H7R5 613 aa12.14□□□□□ -0.47
CPSF1-201ENST00000526271 TMEM38BQ9NVV0 291 aa12.14□□□□□ -0.47
CPSF1-201ENST00000526271 DCAF16Q9NXF7 216 aa12.14□□□□□ -0.47
CPSF1-201ENST00000526271 TAAR3PQ9P1P4 343 aa12.14□□□□□ -0.47
CPSF1-201ENST00000526271 ARMCX1Q9P291 453 aa12.14□□□□□ -0.47
CPSF1-201ENST00000526271 POFUT2Q9Y2G5 429 aa12.14□□□□□ -0.47
CPSF1-201ENST00000526271 GRIP1Q9Y3R0 1128 aa12.14□□□□□ -0.47
CPSF1-201ENST00000526271 CORINQ9Y5Q5 1042 aa12.14□□□□□ -0.47
CPSF1-201ENST00000526271 WNK1Q9H4A3 2382 aa12.13□□□□□ -0.47
CPSF1-201ENST00000526271 TRAV20A0A0B4J274 112 aa12.13□□□□□ -0.47
CPSF1-201ENST00000526271 C11orf98E9PRG8 122 aa12.13□□□□□ -0.47
CPSF1-201ENST00000526271 MPZL1O95297 269 aa12.13□□□□□ -0.47
CPSF1-201ENST00000526271 ANP32DO95626 131 aa12.13□□□□□ -0.47
CPSF1-201ENST00000526271 MMP7P09237 267 aaPredicted RBP12.13□□□□□ -0.47
CPSF1-201ENST00000526271 PCMT1P22061 227 aa12.13□□□□□ -0.47
CPSF1-201ENST00000526271 MYBPC1Q00872 1141 aa12.13□□□□□ -0.47
CPSF1-201ENST00000526271 PMS2P3Q13401 168 aa12.13□□□□□ -0.47
CPSF1-201ENST00000526271 MELKQ14680 651 aa12.13□□□□□ -0.47
CPSF1-201ENST00000526271 C5orf46Q6UWT4 87 aa12.13□□□□□ -0.47
CPSF1-201ENST00000526271 TREML1Q86YW5 311 aa12.13□□□□□ -0.47
CPSF1-201ENST00000526271 RBM45Q8IUH3 476 aaKnown RBP12.13□□□□□ -0.47
CPSF1-201ENST00000526271 SLC22A24Q8N4F4 322 aa12.13□□□□□ -0.47
CPSF1-201ENST00000526271 FITM2Q8N6M3 262 aa12.13□□□□□ -0.47
CPSF1-201ENST00000526271 C3orf56Q8N813 242 aa12.13□□□□□ -0.47
CPSF1-201ENST00000526271 OR6N1Q8NGY5 312 aa12.13□□□□□ -0.47
CPSF1-201ENST00000526271 RP9Q8TA86 221 aaKnown RBP12.13□□□□□ -0.47
CPSF1-201ENST00000526271 ZNF418Q8TF45 676 aaPredicted RBP12.13□□□□□ -0.47
CPSF1-201ENST00000526271 C22orf15Q8WYQ4 148 aa12.13□□□□□ -0.47
CPSF1-201ENST00000526271 GCDHQ92947 438 aaPredicted RBP12.13□□□□□ -0.47
CPSF1-201ENST00000526271 GLTPQ9NZD2 209 aa12.13□□□□□ -0.47
CPSF1-201ENST00000526271 SLC7A8Q9UHI5 535 aa12.13□□□□□ -0.47
CPSF1-201ENST00000526271 WIPI2Q9Y4P8 454 aa12.13□□□□□ -0.47
CPSF1-201ENST00000526271 NOX1Q9Y5S8 564 aa12.13□□□□□ -0.47
CPSF1-201ENST00000526271 GMEB1Q9Y692 573 aa12.13□□□□□ -0.47
CPSF1-201ENST00000526271 CAPN7Q9Y6W3 813 aa12.13□□□□□ -0.47
CPSF1-201ENST00000526271 A0A1W2PPW3 197 aa12.12□□□□□ -0.47
CPSF1-201ENST00000526271 M0R3H8 397 aa12.12□□□□□ -0.47
CPSF1-201ENST00000526271 TMPRSS2O15393 492 aa12.12□□□□□ -0.47
CPSF1-201ENST00000526271 AKAP8O43823 692 aaKnown RBP12.12□□□□□ -0.47
CPSF1-201ENST00000526271 MFN2O95140 757 aa12.12□□□□□ -0.47
CPSF1-201ENST00000526271 UBL3O95164 117 aa12.12□□□□□ -0.47
CPSF1-201ENST00000526271 RAB36O95755 333 aa12.12□□□□□ -0.47
CPSF1-201ENST00000526271 PGA4P0DJD7 388 aa12.12□□□□□ -0.47
CPSF1-201ENST00000526271 PGA3P0DJD8 388 aa12.12□□□□□ -0.47
CPSF1-201ENST00000526271 MAKP20794 623 aa12.12□□□□□ -0.47
CPSF1-201ENST00000526271 ZFP36P26651 326 aaKnown RBP12.12□□□□□ -0.47
CPSF1-201ENST00000526271 AQP1P29972 269 aa12.12□□□□□ -0.47
CPSF1-201ENST00000526271 CRYBB2P43320 205 aa12.12□□□□□ -0.47
CPSF1-201ENST00000526271 CSNK1A1P48729 337 aa12.12□□□□□ -0.47
CPSF1-201ENST00000526271 CDK6Q00534 326 aa12.12□□□□□ -0.47
CPSF1-201ENST00000526271 MAPRE2Q15555 327 aa12.12□□□□□ -0.47
CPSF1-201ENST00000526271 PRR31Q5SQ13 230 aa12.12□□□□□ -0.47
CPSF1-201ENST00000526271 GCNT6Q5T4J0 391 aa12.12□□□□□ -0.47
CPSF1-201ENST00000526271 PTOV1Q86YD1 416 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms