RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 OR4C15Q8NGM1 316 aa8.89□□□□□ -0.99
VPS28-204ENST00000526054 OR6N1Q8NGY5 312 aa8.89□□□□□ -0.99
VPS28-204ENST00000526054 OR51A7Q8NH64 312 aa8.89□□□□□ -0.99
VPS28-204ENST00000526054 OR6X1Q8NH79 312 aa8.89□□□□□ -0.99
VPS28-204ENST00000526054 MOSPD2Q8NHP6 518 aa8.89□□□□□ -0.99
VPS28-204ENST00000526054 TRMT61AQ96FX7 289 aaKnown RBP8.89□□□□□ -0.99
VPS28-204ENST00000526054 TXNDC15Q96J42 360 aa8.89□□□□□ -0.99
VPS28-204ENST00000526054 ALKBH3Q96Q83 286 aaPredicted RBP8.89□□□□□ -0.99
VPS28-204ENST00000526054 EMC6Q9BV81 110 aa8.89□□□□□ -0.99
VPS28-204ENST00000526054 ALPK2Q86TB3 2170 aa8.89□□□□□ -0.99
VPS28-204ENST00000526054 SONP18583 2426 aaKnown RBP8.89□□□□□ -0.99
VPS28-204ENST00000526054 UNC119BA6NIH7 251 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 RNF223E7ERA6 249 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 PDLIM1O00151 329 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 CDC42EP2O14613 210 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 DEAF1O75398 565 aaPredicted RBP8.88□□□□□ -0.99
VPS28-204ENST00000526054 E2F6O75461 281 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 UPK3AO75631 287 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 RAD51DO75771 328 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 LYZL6O75951 148 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 NDUFB2O95178 105 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 IGHG1P01857 330 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 SOD3P08294 240 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 ITGA5P08648 1049 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 FPR3P25089 353 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 MPGP29372 298 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 RPL4P36578 427 aaKnown RBP8.88□□□□□ -0.99
VPS28-204ENST00000526054 CDKN1AP38936 164 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 CSNK1A1P48729 337 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 SH3BGRP55822 239 aaPredicted RBP8.88□□□□□ -0.99
VPS28-204ENST00000526054 BSPH1Q075Z2 132 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 KRTAP1-1Q07627 177 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 CAMK2DQ13557 499 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 MELKQ14680 651 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 STK11Q15831 433 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 CARD17Q5XLA6 110 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 FAM205BPQ63HN1 556 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 OR7E24Q6IFN5 339 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 C1orf94Q6P1W5 598 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 PGBD2Q6P3X8 592 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 NHLRC1Q6VVB1 395 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 ZER1Q7Z7L7 766 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 C20orf196Q8IYI0 205 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 TMEM123Q8N131 208 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 ZNF433Q8N7K0 673 aaPredicted RBP8.88□□□□□ -0.99
VPS28-204ENST00000526054 MAPK1IP1LQ8NDC0 245 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 PAPD5Q8NDF8 572 aaKnown RBP8.88□□□□□ -0.99
VPS28-204ENST00000526054 C1orf162Q8NEQ5 155 aaPredicted RBP8.88□□□□□ -0.99
VPS28-204ENST00000526054 LILRB1Q8NHL6 650 aaPredicted RBP8.88□□□□□ -0.99
VPS28-204ENST00000526054 FANK1Q8TC84 345 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 GNPDA2Q8TDQ7 276 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 SMAP2Q8WU79 429 aaPredicted RBP8.88□□□□□ -0.99
VPS28-204ENST00000526054 ASB10Q8WXI3 467 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 HSD17B8Q92506 261 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 NEUROG1Q92886 237 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 ZNF566Q969W8 418 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 SLC25A44Q96H78 314 aaPredicted RBP8.88□□□□□ -0.99
VPS28-204ENST00000526054 LRR1Q96L50 414 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 TNFRSF13CQ96RJ3 184 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 ULBP2Q9BZM5 246 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 TXNIPQ9H3M7 391 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 DNAJB9Q9UBS3 223 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 MAGED1Q9Y5V3 778 aaPredicted RBP8.88□□□□□ -0.99
VPS28-204ENST00000526054 U3KQV3 271 aa8.88□□□□□ -0.99
VPS28-204ENST00000526054 CENPBD1B2RD01 187 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 M0R3G1 203 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 OVOL3O00110 214 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 ENTPD5O75356 428 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 CRLF1O75462 422 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 IGHMP01871 453 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 TP53P04637 393 aaPredicted RBP8.87□□□□□ -0.99
VPS28-204ENST00000526054 DANCRP0C864 163 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 FCGR1AP12314 374 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 NR2C1P13056 603 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 GSSP48637 474 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 ARHGDIAP52565 204 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 CLRN1P58418 232 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 CTXN1P60606 82 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 ROR2Q01974 943 aaKnown RBP8.87□□□□□ -0.99
VPS28-204ENST00000526054 LGALS3BPQ08380 585 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 TSPAN31Q12999 210 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 TOP3AQ13472 1001 aaPredicted RBP8.87□□□□□ -0.99
VPS28-204ENST00000526054 CCNIQ14094 377 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 LAPTM4AQ15012 233 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 MICAQ29983 383 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 ZNF672Q499Z4 452 aaPredicted RBP8.87□□□□□ -0.99
VPS28-204ENST00000526054 C9orf135Q5VTT2 229 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 RPL13AP3Q6NVV1 102 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 KLHL24Q6TFL4 600 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 SEZ6L2Q6UXD5 910 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 CXXC5Q7LFL8 322 aaKnown RBP8.87□□□□□ -0.99
VPS28-204ENST00000526054 IGFN1Q86VF2 1251 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 P2RY8Q86VZ1 359 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 C17orf78Q8N4C9 275 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 LRRC75AQ8NAA5 344 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 NOXO1Q8NFA2 376 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 OR10G2Q8NGC3 310 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 OR9Q2Q8NGE9 314 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 GIPC3Q8TF64 312 aa8.87□□□□□ -0.99
VPS28-204ENST00000526054 SLCO4A1Q96BD0 722 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms