RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 NUDT2P50583 147 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 MAP2K6P52564 334 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 MVDP53602 400 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 CRISP3P54108 245 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 SH3BGRP55822 239 aaPredicted RBP5.63□□□□□ -1.51
CD44-221ENST00000526000 TMEM33P57088 247 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 CBX1P83916 185 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 GALK2Q01415 458 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 PMS2P3Q13401 168 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 RGNQ15493 299 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 NKPD1Q17RQ9 610 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 GSG1Q2KHT4 349 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 C3orf36Q3SXR2 165 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 DNAL1Q4LDG9 190 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 AWAT1Q58HT5 328 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 INTS11Q5TA45 600 aaKnown RBP5.63□□□□□ -1.51
CD44-221ENST00000526000 NANOGP8Q6NSW7 305 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 ACSM5Q6NUN0 579 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 C8orf82Q6P1X6 216 aaPredicted RBP5.63□□□□□ -1.51
CD44-221ENST00000526000 C6orf89Q6UWU4 347 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 CCDC121Q6ZUS5 278 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 NET1Q7Z628 596 aaPredicted RBP5.63□□□□□ -1.51
CD44-221ENST00000526000 COMTD1Q86VU5 262 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 UEVLDQ8IX04 471 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 SKA3Q8IX90 412 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 PGAM4Q8N0Y7 254 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 FAM169BQ8N8A8 192 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 BHLHE22Q8NFJ8 381 aaPredicted RBP5.63□□□□□ -1.51
CD44-221ENST00000526000 IL17RDQ8NFM7 739 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 OR51F2Q8NH61 342 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 SGMS2Q8NHU3 365 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 SH3GL3Q99963 347 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 ECSITQ9BQ95 431 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 WFDC6Q9BQY6 131 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 CPPED1Q9BRF8 314 aaPredicted RBP5.63□□□□□ -1.51
CD44-221ENST00000526000 ULBP2Q9BZM5 246 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 RACGAP1Q9H0H5 632 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 MMADHCQ9H3L0 296 aaPredicted RBP5.63□□□□□ -1.51
CD44-221ENST00000526000 KAT8Q9H7Z6 458 aaKnown RBP5.63□□□□□ -1.51
CD44-221ENST00000526000 NANOGQ9H9S0 305 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 BCL2L10Q9HD36 194 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 A4GALTQ9NPC4 353 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 SPAG4Q9NPE6 437 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 ESM1Q9NQ30 184 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 ARL8BQ9NVJ2 186 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 SLC25A37Q9NYZ2 338 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 UBAP1Q9NZ09 502 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 VAPAQ9P0L0 249 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 ABCD2Q9UBJ2 740 aa5.63□□□□□ -1.51
CD44-221ENST00000526000 ARHGAP32A7KAX9 2087 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 TRAV36DV7A0A075B6V5 113 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 A0A087WUJ7 227 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 A0A0A6YYJ9 748 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 A0A0G2JPF8 293 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 B2RBV5 119 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 HNRNPCL2B2RXH8 293 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 HNRNPCL3B7ZW38 293 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 C5orf58C9J3I9 102 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 FXYD1O00168 92 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 SPRY3O43610 288 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 TRAF3IP2O43734 574 aaPredicted RBP5.62□□□□□ -1.51
CD44-221ENST00000526000 RAB36O95755 333 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 PNPP00491 289 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 IFNA14P01570 189 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 HNRNPCL4P0DMR1 293 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 ARAFP10398 606 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 HSD17B1P14061 328 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 ETS2P15036 469 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 ZNF14P17017 642 aaPredicted RBP5.62□□□□□ -1.51
CD44-221ENST00000526000 HOXB6P17509 224 aaKnown RBP5.62□□□□□ -1.51
CD44-221ENST00000526000 ACHEP22303 614 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 CCNOP22674 350 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 PAX7P23759 505 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 SLC6A2P23975 617 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 HTR2AP28223 471 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 RAD52P43351 418 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 BIDP55957 195 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 HILS1P60008 231 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 PSME3P61289 254 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 LCN2P80188 198 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 MXRA7P84157 204 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 DEFA6Q01524 100 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 POU3F1Q03052 451 aaPredicted RBP5.62□□□□□ -1.51
CD44-221ENST00000526000 BNIP1Q12981 228 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 SAMD4BQ5PRF9 694 aaKnown RBP5.62□□□□□ -1.51
CD44-221ENST00000526000 GCNT6Q5T4J0 391 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 C1QTNF12Q5T7M4 302 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 RGS7BPQ6MZT1 257 aaPredicted RBP5.62□□□□□ -1.51
CD44-221ENST00000526000 TMEM154Q6P9G4 183 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 UGT2A3Q6UWM9 527 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 WDR88Q6ZMY6 472 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 USP51Q70EK9 711 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 JAZF1Q86VZ6 243 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 MSRB3Q8IXL7 192 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 TMEM123Q8N131 208 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 BCL6BQ8N143 479 aaPredicted RBP5.62□□□□□ -1.51
CD44-221ENST00000526000 BPIFB2Q8N4F0 458 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 PAQR4Q8N4S7 273 aaPredicted RBP5.62□□□□□ -1.51
CD44-221ENST00000526000 POU5F2Q8N7G0 328 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 ZDHHC22Q8N966 263 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms