RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 HORMAD1Q86X24 394 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 DHFR2Q86XF0 187 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 CACUL1Q86Y37 369 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 NAXDQ8IW45 347 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 GCNT2Q8N0V5 402 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 MREGQ8N565 214 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 ZNF561Q8N587 486 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 ARRDC1Q8N5I2 433 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 CYB561A3Q8NBI2 242 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 TMEM35BQ8NCS4 154 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 STXBP6Q8NFX7 210 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 OR4K14Q8NGD5 310 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 RNASE11Q8TAA1 199 aaKnown RBP2.92□□□□□ -1.94
CD44-217ENST00000525348 C8orf46Q8TAG6 207 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 PCNPQ8WW12 178 aaKnown RBP2.92□□□□□ -1.94
CD44-217ENST00000525348 RLN3Q8WXF3 142 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 RAB1CQ92928 201 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 TMEM186Q96B77 213 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 SERPINB11Q96P15 392 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 CITED1Q99966 193 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 KLHDC3Q9BQ90 382 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 ZNF416Q9BWM5 594 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 VCX2Q9H322 139 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 MAGEF1Q9HAY2 307 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 LPAR2Q9HBW0 351 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 ZFP14Q9HCL3 533 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 ZCCHC3Q9NUD5 404 aaKnown RBP2.92□□□□□ -1.94
CD44-217ENST00000525348 MED17Q9NVC6 651 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 SDHAF2Q9NX18 166 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 TREM2Q9NZC2 230 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 GLTPQ9NZD2 209 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 ARMCX1Q9P291 453 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 MIOXQ9UGB7 285 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 BCAP29Q9UHQ4 241 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 FBXO7Q9Y3I1 522 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 UGT2A1Q9Y4X1 527 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 V9GYQ6 96 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 SHANK3Q9BYB0 1731 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 TMEM131LA2VDJ0 1609 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 MROH1Q8NDA8 1641 aa2.92□□□□□ -1.94
CD44-217ENST00000525348 AKAP11Q9UKA4 1901 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 TRAV25A0A0B4J276 109 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 A0A0U1RQS6 177 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 METTL21EPA6NDL7 271 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 A8MXQ7 604 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 E7ESA3 106 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 KLRC4-KLRK1H3BQV0 150 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 M0QZK8 103 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 M0R296 226 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 TLR4O00206 839 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 KPNA4O00629 521 aaPredicted RBP2.91□□□□□ -1.94
CD44-217ENST00000525348 CCSO14618 274 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 PRRG1O14668 218 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 CTDSPLO15194 276 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 KBTBD11O94819 623 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 PPBPP02775 128 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 SBK2P0C263 348 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 HSPD1P10809 573 aaKnown RBP2.91□□□□□ -1.94
CD44-217ENST00000525348 PSMC3P17980 439 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 OGNP20774 298 aaKnown RBP2.91□□□□□ -1.94
CD44-217ENST00000525348 DTYMKP23919 212 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 ACKR3P25106 362 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 DCKP27707 260 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 PPP2R1BP30154 601 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 CCND3P30281 292 aaPredicted RBP2.91□□□□□ -1.94
CD44-217ENST00000525348 SFNP31947 248 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 SPRP35270 261 aaPredicted RBP2.91□□□□□ -1.94
CD44-217ENST00000525348 SLC1A2P43004 574 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 RPL5P46777 297 aaKnown RBP2.91□□□□□ -1.94
CD44-217ENST00000525348 TGM4P49221 684 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 CSNK1EP49674 416 aaKnown RBP2.91□□□□□ -1.94
CD44-217ENST00000525348 CCR8P51685 355 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 KIAA1024LP59773 190 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 DEFA6Q01524 100 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 SLAMF1Q13291 335 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 SLC39A6Q13433 755 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 ASAH1Q13510 395 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 TSTA3Q13630 321 aaPredicted RBP2.91□□□□□ -1.94
CD44-217ENST00000525348 IL18Q14116 193 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 RCAN2Q14206 197 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 FASTKQ14296 549 aaKnown RBP2.91□□□□□ -1.94
CD44-217ENST00000525348 ITIH4Q14624 930 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 PDK3Q15120 406 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 GRK1Q15835 563 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 DEFB115Q30KQ5 88 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 ACSBG2Q5FVE4 666 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 UTF1Q5T230 341 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 PDZK1Q5T2W1 519 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 FHL5Q5TD97 284 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 HACD4Q5VWC8 232 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 CERS6Q6ZMG9 384 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 LRRC74BQ6ZQY2 392 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 SMIM15Q7Z3B0 74 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 ADGRD2Q7Z7M1 963 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 TRIM69Q86WT6 500 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 VRK2Q86Y07 508 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 ZNF573Q86YE8 665 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 PHF13Q86YI8 300 aaPredicted RBP2.91□□□□□ -1.94
CD44-217ENST00000525348 RAB43Q86YS6 212 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 TGIF2LXQ8IUE1 241 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms