RNA–Protein interactions for RNA: ENST00000525074.5

TRIM3-203, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRIM3, Length 3,044 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-203ENST00000525074 TREM1Q9NP99 234 aa11.96□□□□□ -0.49
TRIM3-203ENST00000525074 COA4Q9NYJ1 87 aa11.96□□□□□ -0.49
TRIM3-203ENST00000525074 CTSFQ9UBX1 484 aa11.96□□□□□ -0.49
TRIM3-203ENST00000525074 MRPS2Q9Y399 296 aaKnown RBP11.96□□□□□ -0.49
TRIM3-203ENST00000525074 FREM2Q5SZK8 3169 aa11.96□□□□□ -0.5
TRIM3-203ENST00000525074 ARPC4-TTLL3A0A0A6YYG9 625 aa11.96□□□□□ -0.5
TRIM3-203ENST00000525074 A0A1B0GW55 424 aa11.96□□□□□ -0.5
TRIM3-203ENST00000525074 TMEM218A2RU14 115 aa11.96□□□□□ -0.5
TRIM3-203ENST00000525074 EEF1E1-BLOC1S5C9J1V9 151 aa11.96□□□□□ -0.5
TRIM3-203ENST00000525074 P2RX6O15547 441 aa11.96□□□□□ -0.5
TRIM3-203ENST00000525074 XRCC3O43542 346 aa11.96□□□□□ -0.5
TRIM3-203ENST00000525074 GPRIN2O60269 458 aa11.96□□□□□ -0.5
TRIM3-203ENST00000525074 ACTL6AO96019 429 aa11.96□□□□□ -0.5
TRIM3-203ENST00000525074 DUX4L2P0CJ85 424 aa11.96□□□□□ -0.5
TRIM3-203ENST00000525074 DUX4L3P0CJ86 424 aa11.96□□□□□ -0.5
TRIM3-203ENST00000525074 DUX4L4P0CJ87 422 aa11.96□□□□□ -0.5
TRIM3-203ENST00000525074 DUX4L5P0CJ88 424 aa11.96□□□□□ -0.5
TRIM3-203ENST00000525074 DUX4L6P0CJ89 424 aa11.96□□□□□ -0.5
TRIM3-203ENST00000525074 DUX4L7P0CJ90 424 aa11.96□□□□□ -0.5
TRIM3-203ENST00000525074 AKR1C3P42330 323 aa11.96□□□□□ -0.5
TRIM3-203ENST00000525074 DPTQ07507 201 aa11.96□□□□□ -0.5
TRIM3-203ENST00000525074 IRF4Q15306 451 aa11.96□□□□□ -0.5
TRIM3-203ENST00000525074 KCTD9Q7L273 389 aa11.96□□□□□ -0.5
TRIM3-203ENST00000525074 RAB11FIP2Q7L804 512 aa11.96□□□□□ -0.5
TRIM3-203ENST00000525074 SLC35F3Q8IY50 421 aa11.96□□□□□ -0.5
TRIM3-203ENST00000525074 EID2Q8N6I1 236 aa11.96□□□□□ -0.5
TRIM3-203ENST00000525074 OR10G6Q8NH81 332 aa11.96□□□□□ -0.5
TRIM3-203ENST00000525074 RNF166Q96A37 237 aaPredicted RBP11.96□□□□□ -0.5
TRIM3-203ENST00000525074 MYADMQ96S97 322 aa11.96□□□□□ -0.5
TRIM3-203ENST00000525074 UTP23Q9BRU9 249 aaKnown RBP11.96□□□□□ -0.5
TRIM3-203ENST00000525074 RXFP3Q9NSD7 469 aa11.96□□□□□ -0.5
TRIM3-203ENST00000525074 DUX4Q9UBX2 424 aa11.96□□□□□ -0.5
TRIM3-203ENST00000525074 MRM2Q9UI43 246 aaKnown RBP11.96□□□□□ -0.5
TRIM3-203ENST00000525074 ICAM5Q9UMF0 924 aa11.96□□□□□ -0.5
TRIM3-203ENST00000525074 FAM96BQ9Y3D0 163 aa11.96□□□□□ -0.5
TRIM3-203ENST00000525074 KLF2Q9Y5W3 355 aaPredicted RBP11.96□□□□□ -0.5
TRIM3-203ENST00000525074 ELOA3DA6NLF2 546 aaPredicted RBP11.95□□□□□ -0.5
TRIM3-203ENST00000525074 FGF17O60258 216 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 RAB3DO95716 219 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 ADH1CP00326 375 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 HLA-AP01891 365 aaKnown RBP11.95□□□□□ -0.5
TRIM3-203ENST00000525074 CRYBA1P05813 215 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 THBS1P07996 1170 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 ITGA5P08648 1049 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 AVPR2P30518 371 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 CCKBRP32239 447 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 PRSS3P35030 304 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 CDKN2AP42771 156 aaKnown RBP11.95□□□□□ -0.5
TRIM3-203ENST00000525074 TFF2Q03403 129 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 SCRN3Q0VDG4 424 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 SWI5Q1ZZU3 235 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 ELOA3BQ3SY89 546 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 FAM109BQ6ICB4 259 aaPredicted RBP11.95□□□□□ -0.5
TRIM3-203ENST00000525074 FAM220AQ7Z4H9 259 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 ZNF227Q86WZ6 799 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 ELOA3Q8NG57 546 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 OR5T2Q8NGG2 359 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 OR14C36Q8NHC7 312 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 SPPL3Q8TCT6 385 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 TSEN15Q8WW01 171 aaKnown RBP11.95□□□□□ -0.5
TRIM3-203ENST00000525074 COMMD9Q9P000 198 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 NDRG3Q9UGV2 375 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 ARHGEF17Q96PE2 2063 aaPredicted RBP11.95□□□□□ -0.5
TRIM3-203ENST00000525074 MPDZO75970 2070 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 CSF1P09603 554 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 CALCBP10092 127 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 RBM39Q14498 530 aaKnown RBP11.95□□□□□ -0.5
TRIM3-203ENST00000525074 RBMS3Q6XE24 437 aaKnown RBP11.95□□□□□ -0.5
TRIM3-203ENST00000525074 OR6N2Q8NGY6 317 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 COX14Q96I36 57 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 EDDM13A0A1B0GTR0 161 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 CPED1A4D0V7 1026 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 FITM1A5D6W6 292 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 OR14I1A6ND48 311 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 ZNF806P0C7X5 589 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 PVRP15151 417 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 CENPAP49450 140 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 MRPS10P82664 201 aaKnown RBP11.95□□□□□ -0.5
TRIM3-203ENST00000525074 DPY19L4Q7Z388 723 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 GABRG1Q8N1C3 465 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 SVBPQ8N300 66 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 PATE1Q8WXA2 126 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 RPP25Q9BUL9 199 aaKnown RBP11.95□□□□□ -0.5
TRIM3-203ENST00000525074 ZNF304Q9HCX3 659 aa11.95□□□□□ -0.5
TRIM3-203ENST00000525074 C13orf42A0A1B0GVH6 325 aa11.94□□□□□ -0.5
TRIM3-203ENST00000525074 VAMP1P23763 118 aa11.94□□□□□ -0.5
TRIM3-203ENST00000525074 CD34P28906 385 aa11.94□□□□□ -0.5
TRIM3-203ENST00000525074 MNDAP41218 407 aa11.94□□□□□ -0.5
TRIM3-203ENST00000525074 ARFIP1P53367 373 aa11.94□□□□□ -0.5
TRIM3-203ENST00000525074 ILF3Q12906 894 aaKnown RBP eCLIP11.94□□□□□ -0.5
TRIM3-203ENST00000525074 DHRS2Q13268 280 aa11.94□□□□□ -0.5
TRIM3-203ENST00000525074 ALKBH1Q13686 389 aaKnown RBP11.94□□□□□ -0.5
TRIM3-203ENST00000525074 GAB4Q2WGN9 574 aa11.94□□□□□ -0.5
TRIM3-203ENST00000525074 C2orf76Q3KRA6 126 aa11.94□□□□□ -0.5
TRIM3-203ENST00000525074 PRAMEF17Q5VTA0 474 aa11.94□□□□□ -0.5
TRIM3-203ENST00000525074 GLT8D1Q68CQ7 371 aa11.94□□□□□ -0.5
TRIM3-203ENST00000525074 TANGO2Q6ICL3 276 aa11.94□□□□□ -0.5
TRIM3-203ENST00000525074 C3orf33Q6P1S2 294 aa11.94□□□□□ -0.5
TRIM3-203ENST00000525074 VITQ6UXI7 678 aa11.94□□□□□ -0.5
TRIM3-203ENST00000525074 SLC35D2Q76EJ3 337 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms