RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 EFCAB9A8MZ26 197 aa18.17■□□□□ 0.5
TRAPPC9-215ENST00000524162 MCIDASD6RGH6 385 aa18.17■□□□□ 0.5
TRAPPC9-215ENST00000524162 PDE5AO76074 875 aa18.17■□□□□ 0.5
TRAPPC9-215ENST00000524162 CECR9P0C854 216 aa18.17■□□□□ 0.5
TRAPPC9-215ENST00000524162 T-ENOLP0DO92 83 aa18.17■□□□□ 0.5
TRAPPC9-215ENST00000524162 APOBEC3AP31941 199 aaPredicted RBP18.17■□□□□ 0.5
TRAPPC9-215ENST00000524162 LSM11P83369 360 aaKnown RBP eCLIP18.17■□□□□ 0.51e-6■■■■□ 22.6
TRAPPC9-215ENST00000524162 LAPTM4AQ15012 233 aa18.17■□□□□ 0.5
TRAPPC9-215ENST00000524162 C11orf71Q6IPW1 123 aa18.17■□□□□ 0.5
TRAPPC9-215ENST00000524162 FBXL14Q8N1E6 418 aa18.17■□□□□ 0.5
TRAPPC9-215ENST00000524162 MUC15Q8N387 334 aa18.17■□□□□ 0.5
TRAPPC9-215ENST00000524162 NUP37Q8NFH4 326 aa18.17■□□□□ 0.5
TRAPPC9-215ENST00000524162 MOSPD2Q8NHP6 518 aa18.17■□□□□ 0.5
TRAPPC9-215ENST00000524162 NMD3Q96D46 503 aaKnown RBP18.17■□□□□ 0.5
TRAPPC9-215ENST00000524162 ZNF347Q96SE7 839 aa18.17■□□□□ 0.5
TRAPPC9-215ENST00000524162 FUZQ9BT04 418 aa18.17■□□□□ 0.5
TRAPPC9-215ENST00000524162 ALG12Q9BV10 488 aa18.17■□□□□ 0.5
TRAPPC9-215ENST00000524162 NDEL1Q9GZM8 345 aa18.17■□□□□ 0.5
TRAPPC9-215ENST00000524162 KRCC1Q9NPI7 259 aaPredicted RBP18.17■□□□□ 0.5
TRAPPC9-215ENST00000524162 TMEM38BQ9NVV0 291 aa18.17■□□□□ 0.5
TRAPPC9-215ENST00000524162 FBXO9Q9UK97 447 aaPredicted RBP18.17■□□□□ 0.5
TRAPPC9-215ENST00000524162 NIPBLQ6KC79 2804 aaeCLIP18.17■□□□□ 0.5
TRAPPC9-215ENST00000524162 AHCYL1O43865 530 aa18.16■□□□□ 0.5
TRAPPC9-215ENST00000524162 TRMUO75648 421 aaKnown RBP18.16■□□□□ 0.5
TRAPPC9-215ENST00000524162 UBL3O95164 117 aa18.16■□□□□ 0.5
TRAPPC9-215ENST00000524162 QDPRP09417 244 aa18.16■□□□□ 0.5
TRAPPC9-215ENST00000524162 OR8G3PP0DMU2 310 aa18.16■□□□□ 0.5
TRAPPC9-215ENST00000524162 BMP4P12644 408 aa18.16■□□□□ 0.5
TRAPPC9-215ENST00000524162 LIMS1P48059 325 aa18.16■□□□□ 0.5
TRAPPC9-215ENST00000524162 CLRN1P58418 232 aa18.16■□□□□ 0.5
TRAPPC9-215ENST00000524162 RPL27P61353 136 aaKnown RBP18.16■□□□□ 0.5
TRAPPC9-215ENST00000524162 MELKQ14680 651 aa18.16■□□□□ 0.5
TRAPPC9-215ENST00000524162 GSG1Q2KHT4 349 aa18.16■□□□□ 0.5
TRAPPC9-215ENST00000524162 PODNL1Q6PEZ8 512 aa18.16■□□□□ 0.5
TRAPPC9-215ENST00000524162 B3GLCTQ6Y288 498 aa18.16■□□□□ 0.5
TRAPPC9-215ENST00000524162 MCHR2Q969V1 340 aa18.16■□□□□ 0.5
TRAPPC9-215ENST00000524162 MCUR1Q96AQ8 359 aa18.16■□□□□ 0.5
TRAPPC9-215ENST00000524162 PERPQ96FX8 193 aa18.16■□□□□ 0.5
TRAPPC9-215ENST00000524162 ZNF75AQ96N20 296 aa18.16■□□□□ 0.5
TRAPPC9-215ENST00000524162 KCNK17Q96T54 332 aa18.16■□□□□ 0.5
TRAPPC9-215ENST00000524162 ZNF224Q9NZL3 707 aa18.16■□□□□ 0.5
TRAPPC9-215ENST00000524162 MOKQ9UQ07 419 aa18.16■□□□□ 0.5
TRAPPC9-215ENST00000524162 NSD1Q96L73 2696 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC9-215ENST00000524162 A6NIZ1 184 aa18.15■□□□□ 0.5
TRAPPC9-215ENST00000524162 ATP6V1G2-DDX39BF2Z307 99 aa18.15■□□□□ 0.5
TRAPPC9-215ENST00000524162 FARS2O95363 451 aaKnown RBP18.15■□□□□ 0.5
TRAPPC9-215ENST00000524162 B4GALT1P15291 398 aa18.15■□□□□ 0.5
TRAPPC9-215ENST00000524162 ZNF84P51523 738 aa18.15■□□□□ 0.5
TRAPPC9-215ENST00000524162 ATP5J2P56134 94 aa18.15■□□□□ 0.5
TRAPPC9-215ENST00000524162 RAP1BP61224 184 aa18.15■□□□□ 0.5
TRAPPC9-215ENST00000524162 RAP1AP62834 184 aa18.15■□□□□ 0.5
TRAPPC9-215ENST00000524162 TRIM25Q14258 630 aaKnown RBP18.15■□□□□ 0.5
TRAPPC9-215ENST00000524162 ZBED5Q49AG3 693 aa18.15■□□□□ 0.5
TRAPPC9-215ENST00000524162 THEM4Q5T1C6 240 aa18.15■□□□□ 0.5
TRAPPC9-215ENST00000524162 YTHDF3Q7Z739 585 aaKnown RBP18.15■□□□□ 0.5
TRAPPC9-215ENST00000524162 MDP1Q86V88 176 aa18.15■□□□□ 0.5
TRAPPC9-215ENST00000524162 SLC22A24Q8N4F4 322 aa18.15■□□□□ 0.5
TRAPPC9-215ENST00000524162 BCAS4Q8TDM0 211 aa18.15■□□□□ 0.5
TRAPPC9-215ENST00000524162 ZNF442Q9H7R0 627 aa18.15■□□□□ 0.5
TRAPPC9-215ENST00000524162 BARX1Q9HBU1 254 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC9-215ENST00000524162 ATP23Q9Y6H3 246 aa18.15■□□□□ 0.5
TRAPPC9-215ENST00000524162 CSPG4Q6UVK1 2322 aa18.14■□□□□ 0.49
TRAPPC9-215ENST00000524162 ZNF503-AS2A6NEH8 195 aa18.14■□□□□ 0.49
TRAPPC9-215ENST00000524162 H7C417 338 aa18.14■□□□□ 0.49
TRAPPC9-215ENST00000524162 CDC42EP2O14613 210 aa18.14■□□□□ 0.49
TRAPPC9-215ENST00000524162 FABP3P05413 133 aa18.14■□□□□ 0.49
TRAPPC9-215ENST00000524162 ZNF14P17017 642 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC9-215ENST00000524162 MSX2P35548 267 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC9-215ENST00000524162 OMPP47874 163 aa18.14■□□□□ 0.49
TRAPPC9-215ENST00000524162 FABP6P51161 128 aa18.14■□□□□ 0.49
TRAPPC9-215ENST00000524162 MRPS34P82930 218 aaKnown RBP18.14■□□□□ 0.49
TRAPPC9-215ENST00000524162 CHRNB3Q05901 458 aa18.14■□□□□ 0.49
TRAPPC9-215ENST00000524162 RUNX1T1Q06455 604 aa18.14■□□□□ 0.49
TRAPPC9-215ENST00000524162 LCN8Q6JVE9 175 aa18.14■□□□□ 0.49
TRAPPC9-215ENST00000524162 TBPL2Q6SJ96 375 aa18.14■□□□□ 0.49
TRAPPC9-215ENST00000524162 TRPM8Q7Z2W7 1104 aa18.14■□□□□ 0.49
TRAPPC9-215ENST00000524162 OR51A7Q8NH64 312 aa18.14■□□□□ 0.49
TRAPPC9-215ENST00000524162 ZNF519Q8TB69 540 aa18.14■□□□□ 0.49
TRAPPC9-215ENST00000524162 TNFRSF13CQ96RJ3 184 aa18.14■□□□□ 0.49
TRAPPC9-215ENST00000524162 GPX7Q96SL4 187 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC9-215ENST00000524162 BDH2Q9BUT1 245 aa18.14■□□□□ 0.49
TRAPPC9-215ENST00000524162 SH3PXD2BA1X283 911 aa18.13■□□□□ 0.49
TRAPPC9-215ENST00000524162 hCG_2039718K7EN88 272 aa18.13■□□□□ 0.49
TRAPPC9-215ENST00000524162 PTP4A3O75365 173 aa18.13■□□□□ 0.49
TRAPPC9-215ENST00000524162 KRT36O76013 467 aa18.13■□□□□ 0.49
TRAPPC9-215ENST00000524162 HLA-HP01893 362 aa18.13■□□□□ 0.49
TRAPPC9-215ENST00000524162 CD14P08571 375 aa18.13■□□□□ 0.49
TRAPPC9-215ENST00000524162 NPR2P20594 1047 aa18.13■□□□□ 0.49
TRAPPC9-215ENST00000524162 MAGEA2P43356 314 aa18.13■□□□□ 0.49
TRAPPC9-215ENST00000524162 IDH3GP51553 393 aaPredicted RBP18.13■□□□□ 0.49
TRAPPC9-215ENST00000524162 HMGA2P52926 109 aa18.13■□□□□ 0.49
TRAPPC9-215ENST00000524162 CTXN1P60606 82 aa18.13■□□□□ 0.49
TRAPPC9-215ENST00000524162 RAB1AP62820 205 aa18.13■□□□□ 0.49
TRAPPC9-215ENST00000524162 TUBA1BP68363 451 aa18.13■□□□□ 0.49
TRAPPC9-215ENST00000524162 TUBA4AP68366 448 aa18.13■□□□□ 0.49
TRAPPC9-215ENST00000524162 FGD3Q5JSP0 725 aa18.13■□□□□ 0.49
TRAPPC9-215ENST00000524162 TUBA1AQ71U36 451 aa18.13■□□□□ 0.49
TRAPPC9-215ENST00000524162 ARIH2OSQ8N7S6 290 aa18.13■□□□□ 0.49
TRAPPC9-215ENST00000524162 OR4K5Q8NGD3 323 aa18.13■□□□□ 0.49
TRAPPC9-215ENST00000524162 OR13C2Q8NGS9 318 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms