RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 CDK6Q00534 326 aa22.1■■□□□ 1.13
PVT1-219ENST00000523427 C10orf111Q8N326 155 aa22.1■■□□□ 1.13
PVT1-219ENST00000523427 C11orf40Q8WZ69 217 aa22.1■■□□□ 1.13
PVT1-219ENST00000523427 SPATA5L1Q9BVQ7 753 aa22.1■■□□□ 1.13
PVT1-219ENST00000523427 C7orf69Q9H7B7 122 aa22.1■■□□□ 1.13
PVT1-219ENST00000523427 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.1■■□□□ 1.13
PVT1-219ENST00000523427 WIPI2Q9Y4P8 454 aa22.1■■□□□ 1.13
PVT1-219ENST00000523427 V9GYY5 206 aaPredicted RBP22.1■■□□□ 1.13
PVT1-219ENST00000523427 ARAFP10398 606 aa22.09■■□□□ 1.13
PVT1-219ENST00000523427 CRYBB2P43320 205 aa22.09■■□□□ 1.13
PVT1-219ENST00000523427 WDR4P57081 412 aaKnown RBP22.09■■□□□ 1.13
PVT1-219ENST00000523427 MELKQ14680 651 aa22.09■■□□□ 1.13
PVT1-219ENST00000523427 PCGF3Q3KNV8 242 aa22.09■■□□□ 1.13
PVT1-219ENST00000523427 REEP3Q6NUK4 255 aa22.09■■□□□ 1.13
PVT1-219ENST00000523427 SLC35D2Q76EJ3 337 aa22.09■■□□□ 1.13
PVT1-219ENST00000523427 GOLGA6L1Q8N7Z2 621 aa22.09■■□□□ 1.13
PVT1-219ENST00000523427 ZDHHC22Q8N966 263 aa22.09■■□□□ 1.13
PVT1-219ENST00000523427 OR5J2Q8NH18 312 aa22.09■■□□□ 1.13
PVT1-219ENST00000523427 TMEM54Q969K7 222 aa22.09■■□□□ 1.13
PVT1-219ENST00000523427 TMEM38BQ9NVV0 291 aa22.09■■□□□ 1.13
PVT1-219ENST00000523427 SLC22A23A1A5C7 686 aa22.08■■□□□ 1.13
PVT1-219ENST00000523427 CLDN25C9JDP6 229 aa22.08■■□□□ 1.13
PVT1-219ENST00000523427 TPST2O60704 377 aa22.08■■□□□ 1.13
PVT1-219ENST00000523427 SNNO75324 88 aaPredicted RBP22.08■■□□□ 1.13
PVT1-219ENST00000523427 DEAF1O75398 565 aaPredicted RBP22.08■■□□□ 1.13
PVT1-219ENST00000523427 DRD4P21917 467 aa22.08■■□□□ 1.13
PVT1-219ENST00000523427 TEKQ02763 1124 aa22.08■■□□□ 1.13
PVT1-219ENST00000523427 TMEM53Q6P2H8 277 aa22.08■■□□□ 1.13
PVT1-219ENST00000523427 LRFN4Q6PJG9 635 aa22.08■■□□□ 1.13
PVT1-219ENST00000523427 MAVSQ7Z434 540 aa22.08■■□□□ 1.13
PVT1-219ENST00000523427 OR4K5Q8NGD3 323 aa22.08■■□□□ 1.13
PVT1-219ENST00000523427 ZNF519Q8TB69 540 aa22.08■■□□□ 1.13
PVT1-219ENST00000523427 MAELQ96JY0 434 aaKnown RBP22.08■■□□□ 1.13
PVT1-219ENST00000523427 DDX28Q9NUL7 540 aaKnown RBP22.08■■□□□ 1.13
PVT1-219ENST00000523427 SLCO1C1Q9NYB5 712 aa22.08■■□□□ 1.13
PVT1-219ENST00000523427 SLC25A37Q9NYZ2 338 aa22.08■■□□□ 1.13
PVT1-219ENST00000523427 SLAMF8Q9P0V8 285 aa22.08■■□□□ 1.13
PVT1-219ENST00000523427 PKD1L1Q8TDX9 2849 aa22.08■■□□□ 1.13
PVT1-219ENST00000523427 FARS2O95363 451 aaKnown RBP22.07■■□□□ 1.12
PVT1-219ENST00000523427 IGHV2-5P01817 119 aa22.07■■□□□ 1.12
PVT1-219ENST00000523427 ZP4Q12836 540 aa22.07■■□□□ 1.12
PVT1-219ENST00000523427 HFEQ30201 348 aa22.07■■□□□ 1.12
PVT1-219ENST00000523427 ZNF566Q969W8 418 aa22.07■■□□□ 1.12
PVT1-219ENST00000523427 TIMD4Q96H15 378 aa22.07■■□□□ 1.12
PVT1-219ENST00000523427 GAL3ST1Q99999 423 aa22.07■■□□□ 1.12
PVT1-219ENST00000523427 UBAP1Q9NZ09 502 aa22.07■■□□□ 1.12
PVT1-219ENST00000523427 ARHGAP32A7KAX9 2087 aa22.07■■□□□ 1.12
PVT1-219ENST00000523427 IGLV3-9A0A075B6K5 115 aa22.06■■□□□ 1.12
PVT1-219ENST00000523427 ISPDA4D126 451 aa22.06■■□□□ 1.12
PVT1-219ENST00000523427 DHHO43323 396 aa22.06■■□□□ 1.12
PVT1-219ENST00000523427 RNF13O43567 381 aa22.06■■□□□ 1.12
PVT1-219ENST00000523427 PRSS23O95084 383 aa22.06■■□□□ 1.12
PVT1-219ENST00000523427 CH25HO95992 272 aa22.06■■□□□ 1.12
PVT1-219ENST00000523427 ZNF250P15622 560 aa22.06■■□□□ 1.12
PVT1-219ENST00000523427 CCNOP22674 350 aa22.06■■□□□ 1.12
PVT1-219ENST00000523427 UCP2P55851 309 aa22.06■■□□□ 1.12
PVT1-219ENST00000523427 UBA52P62987 128 aaKnown RBP22.06■■□□□ 1.12
PVT1-219ENST00000523427 LCN2P80188 198 aa22.06■■□□□ 1.12
PVT1-219ENST00000523427 SCARB2Q14108 478 aa22.06■■□□□ 1.12
PVT1-219ENST00000523427 TBC1D28Q2M2D7 210 aa22.06■■□□□ 1.12
PVT1-219ENST00000523427 SLC16A14Q7RTX9 510 aa22.06■■□□□ 1.12
PVT1-219ENST00000523427 RANBP3LQ86VV4 465 aaPredicted RBP22.06■■□□□ 1.12
PVT1-219ENST00000523427 MSRB3Q8IXL7 192 aa22.06■■□□□ 1.12
PVT1-219ENST00000523427 SMYD1Q8NB12 490 aa22.06■■□□□ 1.12
PVT1-219ENST00000523427 OR6X1Q8NH79 312 aa22.06■■□□□ 1.12
PVT1-219ENST00000523427 CCL17Q92583 94 aa22.06■■□□□ 1.12
PVT1-219ENST00000523427 RAB1CQ92928 201 aa22.06■■□□□ 1.12
PVT1-219ENST00000523427 DUX5Q96PT3 197 aa22.06■■□□□ 1.12
PVT1-219ENST00000523427 TMEM43Q9BTV4 400 aa22.06■■□□□ 1.12
PVT1-219ENST00000523427 SAP30LQ9HAJ7 183 aa22.06■■□□□ 1.12
PVT1-219ENST00000523427 PRORSD1PA6NEY8 169 aa22.05■■□□□ 1.12
PVT1-219ENST00000523427 J3QLI3 93 aa22.05■■□□□ 1.12
PVT1-219ENST00000523427 M0R3H8 397 aa22.05■■□□□ 1.12
PVT1-219ENST00000523427 TMPRSS2O15393 492 aa22.05■■□□□ 1.12
PVT1-219ENST00000523427 SPRY3O43610 288 aa22.05■■□□□ 1.12
PVT1-219ENST00000523427 QDPRP09417 244 aa22.05■■□□□ 1.12
PVT1-219ENST00000523427 MAKP20794 623 aa22.05■■□□□ 1.12
PVT1-219ENST00000523427 FPR2P25090 351 aa22.05■■□□□ 1.12
PVT1-219ENST00000523427 ARMC8Q8IUR7 673 aa22.05■■□□□ 1.12
PVT1-219ENST00000523427 LRRC18Q8N456 261 aa22.05■■□□□ 1.12
PVT1-219ENST00000523427 MREGQ8N565 214 aa22.05■■□□□ 1.12
PVT1-219ENST00000523427 OR1J1Q8NGS3 322 aa22.05■■□□□ 1.12
PVT1-219ENST00000523427 MCHR1Q99705 422 aa22.05■■□□□ 1.12
PVT1-219ENST00000523427 C1QTNF5Q9BXJ0 243 aa22.05■■□□□ 1.12
PVT1-219ENST00000523427 NKIRAS2Q9NYR9 191 aa22.05■■□□□ 1.12
PVT1-219ENST00000523427 IQCMA0A1B0GVH7 501 aa22.04■■□□□ 1.12
PVT1-219ENST00000523427 TMEM120BA0PK00 339 aa22.04■■□□□ 1.12
PVT1-219ENST00000523427 KPNA4O00629 521 aaPredicted RBP22.04■■□□□ 1.12
PVT1-219ENST00000523427 ENTPD5O75356 428 aa22.04■■□□□ 1.12
PVT1-219ENST00000523427 MT-ATP6P00846 226 aa22.04■■□□□ 1.12
PVT1-219ENST00000523427 MT-ND5P03915 603 aa22.04■■□□□ 1.12
PVT1-219ENST00000523427 HOXB9P17482 250 aaPredicted RBP22.04■■□□□ 1.12
PVT1-219ENST00000523427 SLC6A2P23975 617 aa22.04■■□□□ 1.12
PVT1-219ENST00000523427 PLP2Q04941 152 aa22.04■■□□□ 1.12
PVT1-219ENST00000523427 SLC36A2Q495M3 483 aa22.04■■□□□ 1.12
PVT1-219ENST00000523427 MMEL1Q495T6 779 aa22.04■■□□□ 1.12
PVT1-219ENST00000523427 TREML1Q86YW5 311 aa22.04■■□□□ 1.12
PVT1-219ENST00000523427 LRRC17Q8N6Y2 441 aa22.04■■□□□ 1.12
PVT1-219ENST00000523427 RBM15BQ8NDT2 890 aaKnown RBP22.04■■□□□ 1.12
PVT1-219ENST00000523427 OR1J2Q8NGS2 313 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms