RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 NANOGP8Q6NSW7 305 aa10.11□□□□□ -0.79
CTNNA1-237ENST00000523275 CCDC80Q76M96 950 aa10.11□□□□□ -0.79
CTNNA1-237ENST00000523275 HDXQ7Z353 690 aa10.11□□□□□ -0.79
CTNNA1-237ENST00000523275 DPPA2Q7Z7J5 298 aa10.11□□□□□ -0.79
CTNNA1-237ENST00000523275 TSPYL5Q86VY4 417 aaPredicted RBP10.11□□□□□ -0.79
CTNNA1-237ENST00000523275 LRP11Q86VZ4 500 aa10.11□□□□□ -0.79
CTNNA1-237ENST00000523275 ZNF584Q8IVC4 421 aa10.11□□□□□ -0.79
CTNNA1-237ENST00000523275 SH3GL1Q99961 368 aa10.11□□□□□ -0.79
CTNNA1-237ENST00000523275 SH3GL3Q99963 347 aa10.11□□□□□ -0.79
CTNNA1-237ENST00000523275 PRSS27Q9BQR3 290 aa10.11□□□□□ -0.79
CTNNA1-237ENST00000523275 ZNF426Q9BUY5 554 aa10.11□□□□□ -0.79
CTNNA1-237ENST00000523275 NANOGQ9H9S0 305 aa10.11□□□□□ -0.79
CTNNA1-237ENST00000523275 TMEM38BQ9NVV0 291 aa10.11□□□□□ -0.79
CTNNA1-237ENST00000523275 SLC7A8Q9UHI5 535 aa10.11□□□□□ -0.79
CTNNA1-237ENST00000523275 DUSP13Q9UII6 198 aa10.11□□□□□ -0.79
CTNNA1-237ENST00000523275 TMEFF2Q9UIK5 374 aaPredicted RBP10.11□□□□□ -0.79
CTNNA1-237ENST00000523275 CUBNO60494 3623 aa10.11□□□□□ -0.79
CTNNA1-237ENST00000523275 BLOC1S5-TXNDC5H3BN57 136 aa10.1□□□□□ -0.79
CTNNA1-237ENST00000523275 EDF1O60869 148 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-237ENST00000523275 IGHG1P01857 330 aa10.1□□□□□ -0.79
CTNNA1-237ENST00000523275 HPXP02790 462 aa10.1□□□□□ -0.79
CTNNA1-237ENST00000523275 PGA4P0DJD7 388 aa10.1□□□□□ -0.79
CTNNA1-237ENST00000523275 PGA3P0DJD8 388 aa10.1□□□□□ -0.79
CTNNA1-237ENST00000523275 TCN1P20061 433 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-237ENST00000523275 COL8A2P25067 703 aa10.1□□□□□ -0.79
CTNNA1-237ENST00000523275 SEC24CP53992 1094 aa10.1□□□□□ -0.79
CTNNA1-237ENST00000523275 CDH15P55291 814 aa10.1□□□□□ -0.79
CTNNA1-237ENST00000523275 MELKQ14680 651 aa10.1□□□□□ -0.79
CTNNA1-237ENST00000523275 TRIP10Q15642 601 aa10.1□□□□□ -0.79
CTNNA1-237ENST00000523275 ELFN2Q5R3F8 820 aa10.1□□□□□ -0.79
CTNNA1-237ENST00000523275 TMEM53Q6P2H8 277 aa10.1□□□□□ -0.79
CTNNA1-237ENST00000523275 NANOGNBQ7Z5D8 188 aa10.1□□□□□ -0.79
CTNNA1-237ENST00000523275 SLC30A7Q8NEW0 376 aa10.1□□□□□ -0.79
CTNNA1-237ENST00000523275 OR4K5Q8NGD3 323 aa10.1□□□□□ -0.79
CTNNA1-237ENST00000523275 RDH5Q92781 318 aa10.1□□□□□ -0.79
CTNNA1-237ENST00000523275 C1orf159Q96HA4 380 aa10.1□□□□□ -0.79
CTNNA1-237ENST00000523275 RNF121Q9H920 327 aa10.1□□□□□ -0.79
CTNNA1-237ENST00000523275 MEPEQ9NQ76 525 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-237ENST00000523275 MYEF2Q9P2K5 600 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-237ENST00000523275 BAG5Q9UL15 447 aa10.1□□□□□ -0.79
CTNNA1-237ENST00000523275 ZNF346Q9UL40 294 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-237ENST00000523275 FZR1Q9UM11 496 aa10.1□□□□□ -0.79
CTNNA1-237ENST00000523275 SH3GLB1Q9Y371 365 aa10.1□□□□□ -0.79
CTNNA1-237ENST00000523275 A0A1W2PPW3 197 aa10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 A0A1W2PRG6 482 aa10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 SLC22A23A1A5C7 686 aa10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 FBP2O00757 339 aa10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 MT-ND1P03886 318 aa10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 FUT1P19526 365 aa10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 GPR6P46095 362 aaPredicted RBP10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 ZNF84P51523 738 aa10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 CRYBA2P53672 197 aa10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 TMEM33P57088 247 aa10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 CLRN1P58418 232 aa10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 SELENOVP59797 346 aa10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 SRSF2Q01130 221 aaKnown RBP10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 CCNIQ14094 377 aa10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 MAD2L1BPQ15013 274 aaPredicted RBP10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 HIST3H3Q16695 136 aa10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 SLC36A2Q495M3 483 aa10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 NRN1LQ496H8 165 aa10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 RABL3Q5HYI8 236 aa10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 LIPNQ5VXI9 398 aa10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 SLC16A14Q7RTX9 510 aa10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 CARM1Q86X55 608 aa10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 CALHM3Q86XJ0 350 aa10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 MCHR2Q969V1 340 aa10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 ECSITQ9BQ95 431 aa10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 C19orf24Q9BVV8 132 aa10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 MRPL13Q9BYD1 178 aaKnown RBP10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 C1orf198Q9H425 327 aa10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 VIPAS39Q9H9C1 493 aa10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 CDH20Q9HBT6 801 aa10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 GPR160Q9UJ42 338 aa10.09□□□□□ -0.79
CTNNA1-237ENST00000523275 CENPBD1B2RD01 187 aa10.08□□□□□ -0.8
CTNNA1-237ENST00000523275 B4DSR2 109 aa10.08□□□□□ -0.8
CTNNA1-237ENST00000523275 MCIDASD6RGH6 385 aa10.08□□□□□ -0.8
CTNNA1-237ENST00000523275 MGRN1O60291 552 aa10.08□□□□□ -0.8
CTNNA1-237ENST00000523275 OR7A10O76100 309 aa10.08□□□□□ -0.8
CTNNA1-237ENST00000523275 NPPAP01160 153 aa10.08□□□□□ -0.8
CTNNA1-237ENST00000523275 PTHP01270 115 aa10.08□□□□□ -0.8
CTNNA1-237ENST00000523275 IFNA14P01570 189 aa10.08□□□□□ -0.8
CTNNA1-237ENST00000523275 F13BP05160 661 aa10.08□□□□□ -0.8
CTNNA1-237ENST00000523275 FAM157BP0CG42 384 aa10.08□□□□□ -0.8
CTNNA1-237ENST00000523275 NAT2P11245 290 aa10.08□□□□□ -0.8
CTNNA1-237ENST00000523275 CCL2P13500 99 aa10.08□□□□□ -0.8
CTNNA1-237ENST00000523275 PCMT1P22061 227 aa10.08□□□□□ -0.8
CTNNA1-237ENST00000523275 ACHEP22303 614 aa10.08□□□□□ -0.8
CTNNA1-237ENST00000523275 SRP14P37108 136 aaKnown RBP10.08□□□□□ -0.8
CTNNA1-237ENST00000523275 RBM34P42696 430 aaKnown RBP10.08□□□□□ -0.8
CTNNA1-237ENST00000523275 RAD52P43351 418 aa10.08□□□□□ -0.8
CTNNA1-237ENST00000523275 DAP3P51398 398 aaKnown RBP10.08□□□□□ -0.8
CTNNA1-237ENST00000523275 DVL1P1P54792 670 aaPredicted RBP10.08□□□□□ -0.8
CTNNA1-237ENST00000523275 UGT2B15P54855 530 aa10.08□□□□□ -0.8
CTNNA1-237ENST00000523275 TAS2R41P59536 307 aa10.08□□□□□ -0.8
CTNNA1-237ENST00000523275 MRPS11P82912 194 aaKnown RBP10.08□□□□□ -0.8
CTNNA1-237ENST00000523275 MYBPC1Q00872 1141 aa10.08□□□□□ -0.8
CTNNA1-237ENST00000523275 PLP2Q04941 152 aa10.08□□□□□ -0.8
CTNNA1-237ENST00000523275 RUNX1T1Q06455 604 aa10.08□□□□□ -0.8
CTNNA1-237ENST00000523275 RPL18Q07020 188 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms