RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 H3BNH8 94 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 DHHO43323 396 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 SEC14L2O76054 403 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 ANPEPP15144 967 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 ATP6V1C1P21283 382 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 ANP32AP39687 249 aaKnown RBP5.33□□□□□ -1.56
VPS13B-211ENST00000522802 MAGEA8P43361 318 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 GSTM5P46439 218 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 TMEM33P57088 247 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 OR2B6P58173 313 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 PROK1P58294 105 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 NANOS3P60323 173 aaKnown RBP5.33□□□□□ -1.56
VPS13B-211ENST00000522802 MRPS11P82912 194 aaKnown RBP5.33□□□□□ -1.56
VPS13B-211ENST00000522802 DR1Q01658 176 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 LASP1Q14847 261 aaKnown RBP5.33□□□□□ -1.56
VPS13B-211ENST00000522802 FAM189A2Q15884 450 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 DCST2Q5T1A1 773 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 PDZK1Q5T2W1 519 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 SAXO2Q658L1 398 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 OLFML2AQ68BL7 652 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 OLIG3Q7RTU3 272 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 AAED1Q7RTV5 226 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 KLHL7Q8IXQ5 586 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 SPC24Q8NBT2 197 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 OR9K2Q8NGE7 335 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 MRAPQ8TCY5 172 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 NTN5Q8WTR8 489 aaPredicted RBP5.33□□□□□ -1.56
VPS13B-211ENST00000522802 ST8SIA1Q92185 356 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 TMEM45BQ96B21 275 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 KTI12Q96EK9 354 aaPredicted RBP5.33□□□□□ -1.56
VPS13B-211ENST00000522802 DAZAP1Q96EP5 407 aaKnown RBP5.33□□□□□ -1.56
VPS13B-211ENST00000522802 CHMP6Q96FZ7 201 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 AURKBQ96GD4 344 aaPredicted RBP5.33□□□□□ -1.56
VPS13B-211ENST00000522802 CRLF2Q9HC73 371 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 SERINC1Q9NRX5 453 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 SIRT3Q9NTG7 399 aaPredicted RBP5.33□□□□□ -1.56
VPS13B-211ENST00000522802 TMEM45AQ9NWC5 275 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 ASIC5Q9NY37 505 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 PLEK2Q9NYT0 353 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 SH3BP4Q9P0V3 963 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 CMAHPQ9Y471 501 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 WIPI2Q9Y4P8 454 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 TIMM22Q9Y584 194 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 DYNC2H1Q8NCM8 4307 aaKnown RBP5.33□□□□□ -1.56
VPS13B-211ENST00000522802 ZNF587BE7ETH6 402 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 DNPH1O43598 174 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 EIF4E2O60573 245 aaKnown RBP5.32□□□□□ -1.56
VPS13B-211ENST00000522802 SMIM24O75264 130 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 UPK3AO75631 287 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 KRT33AO76009 404 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 RSL1D1O76021 490 aaKnown RBP5.32□□□□□ -1.56
VPS13B-211ENST00000522802 KRT6AP02538 564 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 KRT6BP04259 564 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 HMGN2P05204 90 aaKnown RBP5.32□□□□□ -1.56
VPS13B-211ENST00000522802 UBTFL6P0CB48 400 aaPredicted RBP5.32□□□□□ -1.56
VPS13B-211ENST00000522802 NHLRC4P0CG21 123 aaPredicted RBP5.32□□□□□ -1.56
VPS13B-211ENST00000522802 IGHV4-38-2P0DP08 117 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 SELEP16581 610 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 CCNA2P20248 432 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 HMOX2P30519 316 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 HSD17B3P37058 310 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 KRT6CP48668 564 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 SERPINB8P50452 374 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 ATP4BP51164 291 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 ATP12AP54707 1039 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 FOXA1P55317 472 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 CCL8P80075 99 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 MRPS25P82663 173 aaKnown RBP5.32□□□□□ -1.56
VPS13B-211ENST00000522802 RASA2Q15283 850 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 SUMO4Q6EEV6 95 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 C16orf87Q6PH81 154 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 C3orf62Q6ZUJ4 267 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 GPRIN3Q6ZVF9 776 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 MDP1Q86V88 176 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 POMGNT2Q8NAT1 580 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 OR4F5Q8NH21 305 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 GTF3AQ92664 365 aaKnown RBP5.32□□□□□ -1.56
VPS13B-211ENST00000522802 RAB8BQ92930 207 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 POP5Q969H6 163 aaKnown RBP5.32□□□□□ -1.56
VPS13B-211ENST00000522802 FAM120BQ96EK7 910 aaKnown RBP5.32□□□□□ -1.56
VPS13B-211ENST00000522802 ZNF382Q96SR6 550 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 GATA5Q9BWX5 397 aaPredicted RBP5.32□□□□□ -1.56
VPS13B-211ENST00000522802 BEX1Q9HBH7 125 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 MMP26Q9NRE1 261 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 TNFRSF19Q9NS68 423 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 ACER3Q9NUN7 267 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 C1RLQ9NZP8 487 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 LEF1Q9UJU2 399 aaPredicted RBP5.32□□□□□ -1.56
VPS13B-211ENST00000522802 PURGQ9UJV8 347 aaKnown RBP5.32□□□□□ -1.56
VPS13B-211ENST00000522802 NFU1Q9UMS0 254 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 LRCH1Q9Y2L9 728 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 SNX24Q9Y343 169 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 HDGFL3Q9Y3E1 203 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 NOTCH3Q9UM47 2321 aa5.32□□□□□ -1.56
VPS13B-211ENST00000522802 TET2Q6N021 2002 aaPredicted RBP5.31□□□□□ -1.56
VPS13B-211ENST00000522802 A0A1W2PPW3 197 aa5.31□□□□□ -1.56
VPS13B-211ENST00000522802 CCDC188H7C350 402 aa5.31□□□□□ -1.56
VPS13B-211ENST00000522802 AKR7A3O95154 331 aa5.31□□□□□ -1.56
VPS13B-211ENST00000522802 HSPA4LO95757 839 aa5.31□□□□□ -1.56
VPS13B-211ENST00000522802 CSTAP01040 98 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms