RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 CLDN15P56746 228 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 RPS3AP61247 264 aaKnown RBP13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 SOWAHCQ53LP3 525 aaPredicted RBP13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 FAM205BPQ63HN1 556 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 TRILQ7L0X0 811 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 ZBTB46Q86UZ6 589 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 ATCAYQ86WG3 371 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 OR2T27Q8NH04 317 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 OR10D3Q8NH80 312 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 ADGRG7Q96K78 797 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 C4orf36Q96KX1 117 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 CHCHD6Q9BRQ6 235 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 CCDC86Q9H6F5 360 aaKnown RBP13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 WDR76Q9H967 626 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 MSRB2Q9Y3D2 182 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 PCDHGB7Q9Y5F8 929 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 LIPGQ9Y5X9 500 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 SLC35F4A4IF30 521 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 J3QLW9 94 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 SMAD9O15198 467 aaKnown RBP13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 ZNF19P17023 458 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 CLDN17P56750 224 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 RAC3P60763 192 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 SRYQ05066 204 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 RNFT1Q5M7Z0 435 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 VASNQ6EMK4 673 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 SLC22A16Q86VW1 577 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 PHC2Q8IXK0 858 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 TIGD4Q8IY51 512 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 OR6N2Q8NGY6 317 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 ZHX1-C8orf76Q96EF9 292 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 TSC22D3Q99576 134 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 DEFB127Q9H1M4 99 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 COA3Q9Y2R0 106 aaPredicted RBP13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 LOC400499M0QZD8 3231 aa13.78□□□□□ -0.2
CTNNA1-236ENST00000522792 CFAP47Q6ZTR5 3102 aa13.77□□□□□ -0.2
CTNNA1-236ENST00000522792 SPTBN2O15020 2390 aa13.77□□□□□ -0.2
CTNNA1-236ENST00000522792 IGKV1D-43A0A0B4J1Z2 117 aa13.77□□□□□ -0.21
CTNNA1-236ENST00000522792 CPEP16870 476 aa13.77□□□□□ -0.21
CTNNA1-236ENST00000522792 OR12D2P58182 307 aa13.77□□□□□ -0.21
CTNNA1-236ENST00000522792 CLRN1P58418 232 aa13.77□□□□□ -0.21
CTNNA1-236ENST00000522792 NFATC3Q12968 1075 aa13.77□□□□□ -0.21
CTNNA1-236ENST00000522792 HYAL4Q2M3T9 481 aa13.77□□□□□ -0.21
CTNNA1-236ENST00000522792 TP53I3Q53FA7 332 aa13.77□□□□□ -0.21
CTNNA1-236ENST00000522792 SLC16A9Q7RTY1 509 aa13.77□□□□□ -0.21
CTNNA1-236ENST00000522792 FAM109AQ8N4B1 249 aa13.77□□□□□ -0.21
CTNNA1-236ENST00000522792 NDNFQ8TB73 568 aa13.77□□□□□ -0.21
CTNNA1-236ENST00000522792 ROBO4Q8WZ75 1007 aa13.77□□□□□ -0.21
CTNNA1-236ENST00000522792 NSMAFQ92636 917 aa13.77□□□□□ -0.21
CTNNA1-236ENST00000522792 UFD1Q92890 307 aa13.77□□□□□ -0.21
CTNNA1-236ENST00000522792 ZNF845Q96IR2 970 aaPredicted RBP13.77□□□□□ -0.21
CTNNA1-236ENST00000522792 RNF167Q9H6Y7 350 aa13.77□□□□□ -0.21
CTNNA1-236ENST00000522792 ZMIZ1Q9ULJ6 1067 aa13.77□□□□□ -0.21
CTNNA1-236ENST00000522792 KLHDC2Q9Y2U9 406 aa13.77□□□□□ -0.21
CTNNA1-236ENST00000522792 NPIPA2E9PIF3 369 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 NPIPA3F8WFD2 350 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 ACOT7O00154 380 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 PSMD9O00233 223 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 PSKH1P11801 424 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 CRABP1P29762 137 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 LHX2P50458 406 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 AGFG1P52594 562 aaKnown RBP13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 NOXO1Q8NFA2 376 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 TMEM203Q969S6 136 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 INTS14Q96SY0 518 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 NDUFB11Q9NX14 153 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 ING1Q9UK53 422 aaPredicted RBP13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 LOC102725191A0A1B0GVB3 256 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 ZNF726A6NNF4 738 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 E9PI62 339 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 LINC01387J3KSC0 135 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 AKAP8O43823 692 aaKnown RBP13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 MPZL1O95297 269 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 MT-ND5P03915 603 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 PGA4P0DJD7 388 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 PGA3P0DJD8 388 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 ZNF182P17025 639 aaPredicted RBP13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 SLC10A1Q14973 349 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 MEP1BQ16820 701 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 C19orf48Q6RUI8 117 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 CREB3L2Q70SY1 520 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 SPACA3Q8IXA5 215 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 OR9K2Q8NGE7 335 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 SNX33Q8WV41 574 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 ZNF775Q96BV0 537 aaPredicted RBP13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 SLC25A44Q96H78 314 aaPredicted RBP13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 ADAD1Q96M93 576 aaKnown RBP13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 ZNF385AQ96PM9 386 aaKnown RBP13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 SMAD5Q99717 465 aaKnown RBP13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 CENPOQ9BU64 300 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 MRPL13Q9BYD1 178 aaKnown RBP13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 EXOSC4Q9NPD3 245 aaKnown RBP13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 ISYNA1Q9NPH2 558 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 MRPL22Q9NWU5 206 aaKnown RBP13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 BABAM2Q9NXR7 383 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 ALPK2Q86TB3 2170 aa13.76□□□□□ -0.21
CTNNA1-236ENST00000522792 KIAA1549Q9HCM3 1950 aa13.75□□□□□ -0.21
CTNNA1-236ENST00000522792 TRIM64BA6NI03 449 aa13.75□□□□□ -0.21
CTNNA1-236ENST00000522792 PRR32B1ATL7 298 aa13.75□□□□□ -0.21
CTNNA1-236ENST00000522792 ZNF670-ZNF695F2Z2N8 137 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms