RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 FBXW5Q969U6 566 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 MCHR2Q969V1 340 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 LRGUKQ96M69 825 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 TSPAN32Q96QS1 320 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 TNFRSF13CQ96RJ3 184 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 TRAF4Q9BUZ4 470 aaPredicted RBP8.25□□□□□ -1.09
CLK4-209ENST00000521621 SIAEQ9HAT2 523 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 ZNF224Q9NZL3 707 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 ATPIF1Q9UII2 106 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 ZNF346Q9UL40 294 aaKnown RBP8.25□□□□□ -1.09
CLK4-209ENST00000521621 AURKCQ9UQB9 309 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 FBN2P35556 2912 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 IGHV1-18A0A0C4DH31 117 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 SLC22A23A1A5C7 686 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 IGHV3-9P01782 118 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 SAGP10523 405 aaPredicted RBP8.24□□□□□ -1.09
CLK4-209ENST00000521621 FOSL1P15407 271 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 ZNF14P17017 642 aaPredicted RBP8.24□□□□□ -1.09
CLK4-209ENST00000521621 ZNF26P17031 533 aaPredicted RBP8.24□□□□□ -1.09
CLK4-209ENST00000521621 FUT4P22083 530 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 CBLP22681 906 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 TUBG1P23258 451 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 RRM2P31350 389 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 CLRN1P58418 232 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 SPIBQ01892 262 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 MICAQ29983 383 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 FAM27BQ5VT28 67 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 C11orf71Q6IPW1 123 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 PGBD2Q6P3X8 592 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 TBPL2Q6SJ96 375 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 RASSF6Q6ZTQ3 369 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 ASRGL1Q7L266 308 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 SLC22A24Q8N4F4 322 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 THTPAQ9BU02 230 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 CADM1Q9BY67 442 aaKnown RBP8.24□□□□□ -1.09
CLK4-209ENST00000521621 TUBG2Q9NRH3 451 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 CCM2LQ9NUG4 571 aaPredicted RBP8.24□□□□□ -1.09
CLK4-209ENST00000521621 IL20Q9NYY1 176 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 RHCGQ9UBD6 479 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 POMPQ9Y244 141 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 C11orf98E9PRG8 122 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 H3BSA7 217 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 M0R3G1 203 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 SNAP29O95721 258 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 CST2P09228 141 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 COX5BP10606 129 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 YAP1P46937 504 aaKnown RBP8.24□□□□□ -1.09
CLK4-209ENST00000521621 RPS6KA3P51812 740 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 FXYD6P3P58550 94 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 CTXN1P60606 82 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 IL1RL1Q01638 556 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 CAMK2DQ13557 499 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 HIKESHIQ53FT3 197 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.24□□□□□ -1.09
CLK4-209ENST00000521621 OR13C2Q8NGS9 318 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 AKAP1Q92667 903 aaKnown RBP eCLIP8.24□□□□□ -1.09
CLK4-209ENST00000521621 NABP1Q96AH0 204 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 ZC3HAV1LQ96H79 300 aaKnown RBP8.24□□□□□ -1.09
CLK4-209ENST00000521621 RBP7Q96R05 134 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 EMC6Q9BV81 110 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 ARMC1Q9NVT9 282 aa8.24□□□□□ -1.09
CLK4-209ENST00000521621 SETXQ7Z333 2677 aaKnown RBP8.24□□□□□ -1.09
CLK4-209ENST00000521621 SPTBN1Q01082 2364 aaKnown RBP8.24□□□□□ -1.09
CLK4-209ENST00000521621 PCNX1Q96RV3 2341 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 DHRS12A0PJE2 317 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 MCIDASD6RGH6 385 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 H7C417 338 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 FARS2O95363 451 aaKnown RBP8.23□□□□□ -1.09
CLK4-209ENST00000521621 QDPRP09417 244 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 PCSK6P29122 969 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 SLC6A6P31641 620 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 LGALS3BPQ08380 585 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 TMEM53Q6P2H8 277 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 FAM46AQ96IP4 442 aaKnown RBP8.23□□□□□ -1.09
CLK4-209ENST00000521621 OSBPL10Q9BXB5 764 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 CXorf56Q9H5V9 222 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 CDH10Q9Y6N8 788 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 APCP25054 2843 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 ANKHD1Q8IWZ3 2542 aaKnown RBP8.23□□□□□ -1.09
CLK4-209ENST00000521621 TNFRSF11BO00300 401 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 CCNB2O95067 398 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 F13BP05160 661 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 MMP7P09237 267 aaPredicted RBP8.23□□□□□ -1.09
CLK4-209ENST00000521621 ZNF35P13682 527 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 CENPAP49450 140 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 LSM6P62312 80 aaKnown RBP8.23□□□□□ -1.09
CLK4-209ENST00000521621 NKX6-1P78426 367 aaPredicted RBP8.23□□□□□ -1.09
CLK4-209ENST00000521621 LSM11P83369 360 aaKnown RBP eCLIP8.23□□□□□ -1.09
CLK4-209ENST00000521621 NAAAQ02083 359 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 LAPTM4AQ15012 233 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 GSG1Q2KHT4 349 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 SLC36A2Q495M3 483 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 FGD3Q5JSP0 725 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 AGAP6Q5VW22 663 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 FBXW10Q5XX13 1052 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 ZNF813Q6ZN06 617 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 ZNF620Q6ZNG0 422 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 OR1J2Q8NGS2 313 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 ZNF837Q96EG3 531 aaPredicted RBP8.23□□□□□ -1.09
CLK4-209ENST00000521621 REEP1Q9H902 201 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms