RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, human

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCBP-208	ENST00000520228	MFSD12	Q6NUT3	480 aa		6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	SLC30A6	Q6NXT4	461 aa		6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	ARHGAP11A	Q6P4F7	1023 aa		6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	ZCCHC12	Q6PEW1	402 aa		6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	BHLHB9	Q6PI77	547 aa		6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	ANGPTL8	Q6UXH0	198 aa		6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	OR8J2	Q8NGG1	315 aa		6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	PSMA8	Q8TAA3	256 aa		6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	FBXO30	Q8TB52	745 aa		6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	CKAP2	Q8WWK9	683 aa		6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	SMPDL3B	Q92485	455 aa		6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	TESC	Q96BS2	214 aa		6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	EFHD2	Q96C19	240 aa	Predicted RBP	6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	CHMP6	Q96FZ7	201 aa		6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	C16orf58	Q96GQ5	468 aa		6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	NODAL	Q96S42	347 aa		6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	ZBTB18	Q99592	522 aa		6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	MMP27	Q9H306	513 aa		6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	EXO5	Q9H790	373 aa		6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	SLCO1B3	Q9NPD5	702 aa		6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	ZCCHC3	Q9NUD5	404 aa	Known RBP	6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	AIG1	Q9NVV5	245 aa		6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	SH3BGRL2	Q9UJC5	107 aa		6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	FAF1	Q9UNN5	650 aa	Predicted RBP	6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	ZNF835	Q9Y2P0	537 aa		6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	USH1C	Q9Y6N9	552 aa		6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	ASH1L	Q9NR48	2969 aa	Known RBP	6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	DOCK7	Q96N67	2140 aa		6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	USP9Y	O00507	2555 aa	Predicted RBP	6.1	□□□□□ -1.43
SDCBP-208	ENST00000520228	POLE	Q07864	2286 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	UQCRHL	A0A096LP55	91 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	TRGV5	A0A0B4J1U4	118 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228		E9PBE3	544 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	NPIPA2	E9PIF3	369 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	NPIPA3	F8WFD2	350 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	C16orf97	H3BN30	126 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	ZNF195	O14628	629 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	UBD	O15205	165 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	SYNGR3	O43761	229 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	HCN1	O60741	890 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	SLC22A3	O75751	556 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	TGDS	O95455	350 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	LDLR	P01130	860 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	IGHG3	P01860	377 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	HMGN2	P05204	90 aa	Known RBP	6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	TPO	P07202	933 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	KRT16	P08779	473 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	ACP2	P11117	423 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	IDO1	P14902	403 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	ELAVL4	P26378	380 aa	Known RBP	6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	GDF1	P27539	372 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	SOAT1	P35610	550 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	PTGDS	P41222	190 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	MAP3K8	P41279	467 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	TRPC1	P48995	793 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	HBA1	P69905	142 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	LASP1	Q14847	261 aa	Known RBP	6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	DUSP5	Q16690	384 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	FAM174B	Q3ZCQ3	159 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	HSP90B2P	Q58FF3	399 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	IGSF11	Q5DX21	431 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	SPANXN4	Q5MJ08	99 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	DHRS7B	Q6IAN0	325 aa	Predicted RBP	6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	EPGN	Q6UW88	154 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228		Q6ZPB1	254 aa	Predicted RBP	6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	ANKRD46	Q86W74	232 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	DOLPP1	Q86YN1	238 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	CLECL1	Q8IZS7	167 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	CIART	Q8N365	385 aa	Predicted RBP	6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	OR4A15	Q8NGL6	344 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	OR1J4	Q8NGS1	313 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	FAM57A	Q8TBR7	257 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	SFXN5	Q8TD22	340 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	PIK3R3	Q92569	461 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	NTNG2	Q96CW9	530 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	GIMAP5	Q96F15	307 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	RMND5B	Q96G75	393 aa	Predicted RBP	6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	TEX37	Q96LM6	180 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	MAGEB18	Q96M61	343 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	OR52B2	Q96RD2	323 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	OSBPL11	Q9BXB4	747 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	SLA2	Q9H6Q3	261 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	ACKR4	Q9NPB9	350 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	QPCTL	Q9NXS2	382 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	ACAD8	Q9UKU7	415 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	ABCG2	Q9UNQ0	655 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	C15orf41	Q9Y2V0	281 aa		6.09	□□□□□ -1.43
SDCBP-208	ENST00000520228	DOCK10	Q96BY6	2186 aa		6.08	□□□□□ -1.44
SDCBP-208	ENST00000520228	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		6.08	□□□□□ -1.44
SDCBP-208	ENST00000520228	C15orf38-AP3S2	A0A0A6YYH1	394 aa		6.08	□□□□□ -1.44
SDCBP-208	ENST00000520228	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	6.08	□□□□□ -1.44
SDCBP-208	ENST00000520228	RNF103-CHMP3	A0A140T963	221 aa		6.08	□□□□□ -1.44
SDCBP-208	ENST00000520228	C15orf62	A8K5M9	175 aa		6.08	□□□□□ -1.44
SDCBP-208	ENST00000520228		C9JVG2	144 aa		6.08	□□□□□ -1.44
SDCBP-208	ENST00000520228	BMPR1B	O00238	502 aa		6.08	□□□□□ -1.44
SDCBP-208	ENST00000520228	BCKDK	O14874	412 aa		6.08	□□□□□ -1.44
SDCBP-208	ENST00000520228	POLR3G	O15318	223 aa	Predicted RBP	6.08	□□□□□ -1.44
SDCBP-208	ENST00000520228	SCO2	O43819	266 aa		6.08	□□□□□ -1.44

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