RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 CANT1Q8WVQ1 401 aa9.72□□□□□ -0.85
SCARNA20-201ENST00000516768 HDAC2Q92769 488 aaKnown RBP9.72□□□□□ -0.85
SCARNA20-201ENST00000516768 NEUROG1Q92886 237 aa9.72□□□□□ -0.85
SCARNA20-201ENST00000516768 NMD3Q96D46 503 aaKnown RBP9.72□□□□□ -0.85
SCARNA20-201ENST00000516768 ZNF75AQ96N20 296 aa9.72□□□□□ -0.85
SCARNA20-201ENST00000516768 RBP7Q96R05 134 aa9.72□□□□□ -0.85
SCARNA20-201ENST00000516768 NRIP3Q9NQ35 241 aa9.72□□□□□ -0.85
SCARNA20-201ENST00000516768 BEX4Q9NWD9 120 aaPredicted RBP9.72□□□□□ -0.85
SCARNA20-201ENST00000516768 TMCC3Q9ULS5 477 aa9.72□□□□□ -0.85
SCARNA20-201ENST00000516768 AURKCQ9UQB9 309 aa9.72□□□□□ -0.85
SCARNA20-201ENST00000516768 POMPQ9Y244 141 aa9.72□□□□□ -0.85
SCARNA20-201ENST00000516768 LYVE1Q9Y5Y7 322 aa9.72□□□□□ -0.85
SCARNA20-201ENST00000516768 PRRC2AP48634 2157 aaKnown RBP9.72□□□□□ -0.85
SCARNA20-201ENST00000516768 ANKRD17O75179 2603 aaKnown RBP9.72□□□□□ -0.85
SCARNA20-201ENST00000516768 HEATR1Q9H583 2144 aaKnown RBP9.71□□□□□ -0.85
SCARNA20-201ENST00000516768 IGHV1-18A0A0C4DH31 117 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 ZNF503-AS2A6NEH8 195 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 UNC119BA6NIH7 251 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 A6NIZ1 184 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 TNFRSF11BO00300 401 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 OR10H3O60404 316 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 TMCC2O75069 709 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 SEC14L2O76054 403 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 NDUFB2O95178 105 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 DANCRP0C864 163 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 OR8G3PP0DMU2 310 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 HOXB6P17509 224 aaKnown RBP9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 RPL4P36578 427 aaKnown RBP9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 ACVR1BP36896 505 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 IFNGR2P38484 337 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 FXYD6P3P58550 94 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 RAP1BP61224 184 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 RAP1AP62834 184 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 ERVK-25P63136 954 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 TUBA1BP68363 451 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 TUBA4AP68366 448 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 MYBPC1Q00872 1141 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 PGGHGQ32M88 737 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 NRN1LQ496H8 165 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 C10orf128Q5T292 105 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 FAM205BPQ63HN1 556 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 OR2T5Q6IEZ7 315 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 SLC25A47Q6Q0C1 308 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 SLC22A25Q6T423 547 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 SPNS3Q6ZMD2 512 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 TUBA1AQ71U36 451 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 FAM122BQ7Z309 247 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 SKA3Q8IX90 412 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 SLC22A24Q8N4F4 322 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 LINC00471Q8N535 108 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 KBTBD8Q8NFY9 601 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 OR2T29Q8NH02 315 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 ZNF519Q8TB69 540 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 GNPDA2Q8TDQ7 276 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 SMAP2Q8WU79 429 aaPredicted RBP9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 FBXW5Q969U6 566 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 SLC38A2Q96QD8 506 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 TSPAN32Q96QS1 320 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 KATNB1Q9BVA0 655 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 CHID1Q9BWS9 393 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 GRIP2Q9C0E4 1043 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 MMADHCQ9H3L0 296 aaPredicted RBP9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 DENND2DQ9H6A0 471 aaPredicted RBP9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 SMURF2Q9HAU4 748 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 TMEM38BQ9NVV0 291 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 ZNF224Q9NZL3 707 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 GRHPRQ9UBQ7 328 aa9.71□□□□□ -0.86
SCARNA20-201ENST00000516768 OTOGQ6ZRI0 2925 aa9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 DSCAMO60469 2012 aa9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 E7EQL1 145 aa9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 ARHGEF9O43307 516 aa9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 AHCYL1O43865 530 aa9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 ENTPD5O75356 428 aa9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 GASTP01350 101 aa9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 CD8AP01732 235 aa9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 HLA-HP01893 362 aa9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 NR2C1P13056 603 aa9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 B4GALT1P15291 398 aa9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 FPR3P25089 353 aa9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 GSSP48637 474 aa9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 ZNF84P51523 738 aa9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 RAB1AP62820 205 aa9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 PIGFQ07326 219 aa9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 TSPAN31Q12999 210 aa9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 TOP3AQ13472 1001 aaPredicted RBP9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 RFX4Q33E94 735 aa9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 ZNF770Q6IQ21 691 aaPredicted RBP9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 SMARCD3Q6STE5 483 aa9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 THSD4Q6ZMP0 1018 aa9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 DPY19L2P2Q6ZN68 376 aa9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 MDP1Q86V88 176 aa9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 ADGRG5Q8IZF4 528 aa9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 NOXO1Q8NFA2 376 aa9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 IL17RDQ8NFM7 739 aa9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 OR4C15Q8NGM1 316 aa9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 RSRC1Q96IZ7 334 aaKnown RBP9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 Q96M85 177 aa9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 GPX7Q96SL4 187 aaPredicted RBP9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 CCL19Q99731 98 aa9.7□□□□□ -0.86
SCARNA20-201ENST00000516768 ALG12Q9BV10 488 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms