RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 POU3F1Q03052 451 aaPredicted RBP13.86□□□□□ -0.19
THUMPD3-210ENST00000515662 DDI2Q5TDH0 399 aa13.86□□□□□ -0.19
THUMPD3-210ENST00000515662 SLC35D2Q76EJ3 337 aa13.86□□□□□ -0.19
THUMPD3-210ENST00000515662 WDFY1Q8IWB7 410 aa13.86□□□□□ -0.19
THUMPD3-210ENST00000515662 TEX19Q8NA77 164 aa13.86□□□□□ -0.19
THUMPD3-210ENST00000515662 SLC25A43Q8WUT9 341 aaPredicted RBP13.86□□□□□ -0.19
THUMPD3-210ENST00000515662 GNRHR2Q96P88 292 aa13.86□□□□□ -0.19
THUMPD3-210ENST00000515662 ATF6BQ99941 703 aa13.86□□□□□ -0.19
THUMPD3-210ENST00000515662 GPR87Q9BY21 358 aa13.86□□□□□ -0.19
THUMPD3-210ENST00000515662 TSPAN10Q9H1Z9 355 aaPredicted RBP13.86□□□□□ -0.19
THUMPD3-210ENST00000515662 C14orf119Q9NWQ9 140 aa13.86□□□□□ -0.19
THUMPD3-210ENST00000515662 UGT2A1Q9Y4X1 527 aa13.86□□□□□ -0.19
THUMPD3-210ENST00000515662 TMEM14AQ9Y6G1 99 aa13.86□□□□□ -0.19
THUMPD3-210ENST00000515662 V9GYH0 126 aa13.86□□□□□ -0.19
THUMPD3-210ENST00000515662 SERPINA3P01011 423 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 TACSTD2P09758 323 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 DLSTP36957 453 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 RPS27P42677 84 aaKnown RBP13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 CENPAP49450 140 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 BLVRAP53004 296 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 TRIP6Q15654 476 aaKnown RBP13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 ETFDHQ16134 617 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 CSRP2Q16527 193 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 B3GNTL1Q67FW5 361 aaPredicted RBP13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 FAM220AQ7Z4H9 259 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 MDGA2Q7Z553 956 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 NR2C2APQ86WQ0 139 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 GTPBP8Q8N3Z3 284 aaPredicted RBP13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 SGCZQ96LD1 299 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 FOXN4Q96NZ1 517 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 OR5B2Q96R09 309 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 SDHCQ99643 169 aaPredicted RBP13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 PARD6AQ9NPB6 346 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 A0A1W2PNR3 127 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 C21orf140B9A014 251 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 GPRIN2O60269 458 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 UPK3AO75631 287 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 SNX4O95219 450 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 ABHD16AO95870 558 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 HLA-DQA2P01906 255 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 FKBP2P26885 142 aaKnown RBP13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 DPP4P27487 766 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 NANOS3P60323 173 aaKnown RBP13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 ZMAT1Q5H9K5 638 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 FAM205BPQ63HN1 556 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 NHLRC1Q6VVB1 395 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 PIP4P1Q86T03 277 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 CELF2-AS1Q8N7Q2 184 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 ADPRHL1Q8NDY3 354 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 OR1J4Q8NGS1 313 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 OTOSQ8NHW6 89 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 TXNDC15Q96J42 360 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 PDCD1LG2Q9BQ51 273 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 MRPL22Q9NWU5 206 aaKnown RBP13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 MED29Q9NX70 200 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 B3GAT1Q9P2W7 334 aa13.85□□□□□ -0.19
THUMPD3-210ENST00000515662 ISPDA4D126 451 aa13.84□□□□□ -0.19
THUMPD3-210ENST00000515662 ZNF593O00488 134 aaPredicted RBP13.84□□□□□ -0.19
THUMPD3-210ENST00000515662 KRT8P05787 483 aa13.84□□□□□ -0.19
THUMPD3-210ENST00000515662 CFL1P23528 166 aaKnown RBP13.84□□□□□ -0.19
THUMPD3-210ENST00000515662 MYL9P24844 172 aa13.84□□□□□ -0.19
THUMPD3-210ENST00000515662 CRABP1P29762 137 aa13.84□□□□□ -0.19
THUMPD3-210ENST00000515662 RCVRNP35243 200 aa13.84□□□□□ -0.19
THUMPD3-210ENST00000515662 P2RY4P51582 365 aa13.84□□□□□ -0.19
THUMPD3-210ENST00000515662 DSCR4P56555 118 aaPredicted RBP13.84□□□□□ -0.19
THUMPD3-210ENST00000515662 OR2B6P58173 313 aa13.84□□□□□ -0.19
THUMPD3-210ENST00000515662 EGR3Q06889 387 aa13.84□□□□□ -0.19
THUMPD3-210ENST00000515662 LIPNQ5VXI9 398 aa13.84□□□□□ -0.19
THUMPD3-210ENST00000515662 TIGD3Q6B0B8 471 aa13.84□□□□□ -0.19
THUMPD3-210ENST00000515662 PAMR1Q6UXH9 720 aa13.84□□□□□ -0.19
THUMPD3-210ENST00000515662 TPRA1Q86W33 373 aa13.84□□□□□ -0.19
THUMPD3-210ENST00000515662 YIPF7Q8N8F6 280 aa13.84□□□□□ -0.19
THUMPD3-210ENST00000515662 KCNK17Q96T54 332 aa13.84□□□□□ -0.19
THUMPD3-210ENST00000515662 ANKRD10Q9NXR5 420 aa13.84□□□□□ -0.19
THUMPD3-210ENST00000515662 COMMD3Q9UBI1 195 aa13.84□□□□□ -0.19
THUMPD3-210ENST00000515662 KCNG2Q9UJ96 466 aa13.84□□□□□ -0.19
THUMPD3-210ENST00000515662 TRAPPC4Q9Y296 219 aa13.84□□□□□ -0.19
THUMPD3-210ENST00000515662 RPH3AQ9Y2J0 694 aaPredicted RBP13.84□□□□□ -0.19
THUMPD3-210ENST00000515662 EML6Q6ZMW3 1958 aa13.84□□□□□ -0.19
THUMPD3-210ENST00000515662 PHYHO14832 338 aa13.83□□□□□ -0.19
THUMPD3-210ENST00000515662 SFTPDP35247 375 aa13.83□□□□□ -0.19
THUMPD3-210ENST00000515662 TMEM176BQ3YBM2 270 aaPredicted RBP13.83□□□□□ -0.19
THUMPD3-210ENST00000515662 ACER2Q5QJU3 275 aa13.83□□□□□ -0.19
THUMPD3-210ENST00000515662 OTPQ5XKR4 325 aa13.83□□□□□ -0.19
THUMPD3-210ENST00000515662 GDPD3Q7L5L3 318 aa13.83□□□□□ -0.19
THUMPD3-210ENST00000515662 THEM6Q8WUY1 208 aa13.83□□□□□ -0.19
THUMPD3-210ENST00000515662 TMEM41AQ96HV5 264 aa13.83□□□□□ -0.19
THUMPD3-210ENST00000515662 JSRP1Q96MG2 331 aaPredicted RBP13.83□□□□□ -0.19
THUMPD3-210ENST00000515662 ING1Q9UK53 422 aaPredicted RBP13.83□□□□□ -0.19
THUMPD3-210ENST00000515662 HDGFL3Q9Y3E1 203 aa13.83□□□□□ -0.19
THUMPD3-210ENST00000515662 ZIC3O60481 467 aa13.83□□□□□ -0.2
THUMPD3-210ENST00000515662 RPP14O95059 124 aaKnown RBP13.83□□□□□ -0.2
THUMPD3-210ENST00000515662 TNFSF15O95150 251 aa13.83□□□□□ -0.2
THUMPD3-210ENST00000515662 GSTT2P0CG29 244 aa13.83□□□□□ -0.2
THUMPD3-210ENST00000515662 GSTT2BP0CG30 244 aa13.83□□□□□ -0.2
THUMPD3-210ENST00000515662 NR4A2P43354 598 aa13.83□□□□□ -0.2
THUMPD3-210ENST00000515662 PPP3R1P63098 170 aa13.83□□□□□ -0.2
THUMPD3-210ENST00000515662 MRPL28Q13084 256 aaKnown RBP13.83□□□□□ -0.2
THUMPD3-210ENST00000515662 ZNF79Q15937 498 aa13.83□□□□□ -0.2
THUMPD3-210ENST00000515662 TMEM53Q6P2H8 277 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms