RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 GPR4P46093 362 aa13.67□□□□□ -0.22
SERF1B-208ENST00000515588 CLRN1P58418 232 aa13.67□□□□□ -0.22
SERF1B-208ENST00000515588 MXRA7P84157 204 aa13.67□□□□□ -0.22
SERF1B-208ENST00000515588 MYBPC1Q00872 1141 aa13.67□□□□□ -0.22
SERF1B-208ENST00000515588 HGFACQ04756 655 aa13.67□□□□□ -0.22
SERF1B-208ENST00000515588 PIGFQ07326 219 aa13.67□□□□□ -0.22
SERF1B-208ENST00000515588 NPRL3Q12980 569 aa13.67□□□□□ -0.22
SERF1B-208ENST00000515588 DGCR6Q14129 220 aa13.67□□□□□ -0.22
SERF1B-208ENST00000515588 RINLQ6ZS11 566 aa13.67□□□□□ -0.22
SERF1B-208ENST00000515588 IGFN1Q86VF2 1251 aa13.67□□□□□ -0.22
SERF1B-208ENST00000515588 SKA3Q8IX90 412 aa13.67□□□□□ -0.22
SERF1B-208ENST00000515588 FBXL14Q8N1E6 418 aa13.67□□□□□ -0.22
SERF1B-208ENST00000515588 NOXO1Q8NFA2 376 aa13.67□□□□□ -0.22
SERF1B-208ENST00000515588 OR13C2Q8NGS9 318 aa13.67□□□□□ -0.22
SERF1B-208ENST00000515588 HDAC2Q92769 488 aaKnown RBP13.67□□□□□ -0.22
SERF1B-208ENST00000515588 NMD3Q96D46 503 aaKnown RBP13.67□□□□□ -0.22
SERF1B-208ENST00000515588 MS4A3Q96HJ5 214 aa13.67□□□□□ -0.22
SERF1B-208ENST00000515588 NSMCE2Q96MF7 247 aa13.67□□□□□ -0.22
SERF1B-208ENST00000515588 FUZQ9BT04 418 aa13.67□□□□□ -0.22
SERF1B-208ENST00000515588 GSX1Q9H4S2 264 aaPredicted RBP13.67□□□□□ -0.22
SERF1B-208ENST00000515588 CBLN4Q9NTU7 201 aa13.67□□□□□ -0.22
SERF1B-208ENST00000515588 TMEM38BQ9NVV0 291 aa13.67□□□□□ -0.22
SERF1B-208ENST00000515588 NDE1Q9NXR1 346 aa13.67□□□□□ -0.22
SERF1B-208ENST00000515588 GDF2Q9UK05 429 aaPredicted RBP13.67□□□□□ -0.22
SERF1B-208ENST00000515588 FAM32AQ9Y421 112 aaKnown RBP13.67□□□□□ -0.22
SERF1B-208ENST00000515588 NIPBLQ6KC79 2804 aaeCLIP13.66□□□□□ -0.22
SERF1B-208ENST00000515588 IGKV1D-43A0A0B4J1Z2 117 aa13.66□□□□□ -0.22
SERF1B-208ENST00000515588 IGHV2OR16-5A0A0B4J2B6 119 aa13.66□□□□□ -0.22
SERF1B-208ENST00000515588 TRBV4-1A0A0J9YWV2 114 aa13.66□□□□□ -0.22
SERF1B-208ENST00000515588 NPIPB13A6NJU9 1138 aa13.66□□□□□ -0.22
SERF1B-208ENST00000515588 NPIPB4C9JG80 1138 aa13.66□□□□□ -0.22
SERF1B-208ENST00000515588 CRYAAP02489 173 aa13.66□□□□□ -0.22
SERF1B-208ENST00000515588 PATE4P0C8F1 98 aa13.66□□□□□ -0.22
SERF1B-208ENST00000515588 CD79AP11912 226 aa13.66□□□□□ -0.22
SERF1B-208ENST00000515588 FOSL1P15407 271 aa13.66□□□□□ -0.22
SERF1B-208ENST00000515588 APOBEC3AP31941 199 aaPredicted RBP13.66□□□□□ -0.22
SERF1B-208ENST00000515588 ARR3P36575 388 aa13.66□□□□□ -0.22
SERF1B-208ENST00000515588 MNAT1P51948 309 aa13.66□□□□□ -0.22
SERF1B-208ENST00000515588 ZNF133P52736 654 aaPredicted RBP13.66□□□□□ -0.22
SERF1B-208ENST00000515588 TOP3AQ13472 1001 aaPredicted RBP13.66□□□□□ -0.22
SERF1B-208ENST00000515588 SEC23BQ15437 767 aa13.66□□□□□ -0.22
SERF1B-208ENST00000515588 MST1LQ2TV78 715 aa13.66□□□□□ -0.22
SERF1B-208ENST00000515588 SPATS1Q496A3 300 aa13.66□□□□□ -0.22
SERF1B-208ENST00000515588 TMPRSS11FQ6ZWK6 438 aa13.66□□□□□ -0.22
SERF1B-208ENST00000515588 PIWIL3Q7Z3Z3 882 aaKnown RBP13.66□□□□□ -0.22
SERF1B-208ENST00000515588 OAFQ86UD1 273 aa13.66□□□□□ -0.22
SERF1B-208ENST00000515588 SLC22A24Q8N4F4 322 aa13.66□□□□□ -0.22
SERF1B-208ENST00000515588 DHRS1Q96LJ7 313 aa13.66□□□□□ -0.22
SERF1B-208ENST00000515588 SMR3AQ99954 134 aa13.66□□□□□ -0.22
SERF1B-208ENST00000515588 CACNG6Q9BXT2 260 aa13.66□□□□□ -0.22
SERF1B-208ENST00000515588 TXNIPQ9H3M7 391 aa13.66□□□□□ -0.22
SERF1B-208ENST00000515588 MOV10Q9HCE1 1003 aaKnown RBP13.66□□□□□ -0.22
SERF1B-208ENST00000515588 ZNF346Q9UL40 294 aaKnown RBP13.66□□□□□ -0.22
SERF1B-208ENST00000515588 CENPBD1B2RD01 187 aa13.65□□□□□ -0.22
SERF1B-208ENST00000515588 H7C1Q1 480 aa13.65□□□□□ -0.22
SERF1B-208ENST00000515588 IGHMP01871 453 aa13.65□□□□□ -0.22
SERF1B-208ENST00000515588 ZNF14P17017 642 aaPredicted RBP13.65□□□□□ -0.22
SERF1B-208ENST00000515588 GIPRP48546 466 aa13.65□□□□□ -0.22
SERF1B-208ENST00000515588 SLC9A3P48764 834 aa13.65□□□□□ -0.22
SERF1B-208ENST00000515588 CTXN1P60606 82 aa13.65□□□□□ -0.22
SERF1B-208ENST00000515588 GSG1Q2KHT4 349 aa13.65□□□□□ -0.22
SERF1B-208ENST00000515588 FGD3Q5JSP0 725 aa13.65□□□□□ -0.22
SERF1B-208ENST00000515588 CLDN22Q8N7P3 220 aa13.65□□□□□ -0.22
SERF1B-208ENST00000515588 OR52J3Q8NH60 311 aa13.65□□□□□ -0.22
SERF1B-208ENST00000515588 TRMT61AQ96FX7 289 aaKnown RBP13.65□□□□□ -0.22
SERF1B-208ENST00000515588 FAM46AQ96IP4 442 aaKnown RBP13.65□□□□□ -0.22
SERF1B-208ENST00000515588 C18orf12Q96KH6 178 aa13.65□□□□□ -0.22
SERF1B-208ENST00000515588 TSPAN32Q96QS1 320 aa13.65□□□□□ -0.22
SERF1B-208ENST00000515588 KCNK17Q96T54 332 aa13.65□□□□□ -0.22
SERF1B-208ENST00000515588 SH3GL3Q99963 347 aa13.65□□□□□ -0.22
SERF1B-208ENST00000515588 KCNS3Q9BQ31 491 aa13.65□□□□□ -0.22
SERF1B-208ENST00000515588 CA10Q9NS85 328 aa13.65□□□□□ -0.22
SERF1B-208ENST00000515588 CSPG4Q6UVK1 2322 aa13.64□□□□□ -0.23
SERF1B-208ENST00000515588 PTP4A3O75365 173 aa13.64□□□□□ -0.23
SERF1B-208ENST00000515588 SLC2A10O95528 541 aa13.64□□□□□ -0.23
SERF1B-208ENST00000515588 OR8G3PP0DMU2 310 aa13.64□□□□□ -0.23
SERF1B-208ENST00000515588 ATP6V1B2P21281 511 aa13.64□□□□□ -0.23
SERF1B-208ENST00000515588 CALB2P22676 271 aa13.64□□□□□ -0.23
SERF1B-208ENST00000515588 ACVR1BP36896 505 aa13.64□□□□□ -0.23
SERF1B-208ENST00000515588 OMPP47874 163 aa13.64□□□□□ -0.23
SERF1B-208ENST00000515588 LIMS1P48059 325 aa13.64□□□□□ -0.23
SERF1B-208ENST00000515588 PTDSS1P48651 473 aaKnown RBP13.64□□□□□ -0.23
SERF1B-208ENST00000515588 RPL27P61353 136 aaKnown RBP13.64□□□□□ -0.23
SERF1B-208ENST00000515588 RAB1AP62820 205 aa13.64□□□□□ -0.23
SERF1B-208ENST00000515588 FMODQ06828 376 aa13.64□□□□□ -0.23
SERF1B-208ENST00000515588 TAF11Q15544 211 aa13.64□□□□□ -0.23
SERF1B-208ENST00000515588 SWI5Q1ZZU3 235 aa13.64□□□□□ -0.23
SERF1B-208ENST00000515588 ANKDD1AQ495B1 522 aa13.64□□□□□ -0.23
SERF1B-208ENST00000515588 C10orf128Q5T292 105 aa13.64□□□□□ -0.23
SERF1B-208ENST00000515588 RRM2BQ7LG56 351 aa13.64□□□□□ -0.23
SERF1B-208ENST00000515588 HDDC2Q7Z4H3 204 aa13.64□□□□□ -0.23
SERF1B-208ENST00000515588 OR4K5Q8NGD3 323 aa13.64□□□□□ -0.23
SERF1B-208ENST00000515588 ZNF519Q8TB69 540 aa13.64□□□□□ -0.23
SERF1B-208ENST00000515588 COX4I2Q96KJ9 171 aa13.64□□□□□ -0.23
SERF1B-208ENST00000515588 GPA33Q99795 319 aa13.64□□□□□ -0.23
SERF1B-208ENST00000515588 STX18Q9P2W9 335 aaKnown RBP13.64□□□□□ -0.23
SERF1B-208ENST00000515588 UGT2A1Q9Y4X1 527 aa13.64□□□□□ -0.23
SERF1B-208ENST00000515588 TLN2Q9Y4G6 2542 aa13.64□□□□□ -0.23
SERF1B-208ENST00000515588 C2CD3Q4AC94 2353 aa13.64□□□□□ -0.23
SERF1B-208ENST00000515588 UBL3O95164 117 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms