RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 SERPINA5P05154 406 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 F13BP05160 661 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 ADRA2AP08913 450 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 PATE4P0C8F1 98 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 PGA4P0DJD7 388 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 PGA3P0DJD8 388 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 ZNF35P13682 527 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 GLRXP35754 106 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 RPL18Q07020 188 aaKnown RBP11.8□□□□□ -0.52
TCOF1-215ENST00000515516 ST3GAL3Q11203 375 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 SLC36A2Q495M3 483 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 CGB2Q6NT52 195 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 LRFN4Q6PJG9 635 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 SLC16A14Q7RTX9 510 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 ARPINQ7Z6K5 226 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 MICU2Q8IYU8 434 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 CDK20Q8IZL9 346 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 RP9Q8TA86 221 aaKnown RBP11.8□□□□□ -0.52
TCOF1-215ENST00000515516 MRPL24Q96A35 216 aaKnown RBP11.8□□□□□ -0.52
TCOF1-215ENST00000515516 RCN3Q96D15 328 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 SH3GL3Q99963 347 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 SHARPINQ9H0F6 387 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 LRMDAQ9H2I8 198 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 MS4A5Q9H3V2 200 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 C1orf198Q9H425 327 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 TMEM38BQ9NVV0 291 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 TMEM160Q9NX00 188 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 REV1Q9UBZ9 1251 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 SLC7A8Q9UHI5 535 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 KCNS2Q9ULS6 477 aa11.8□□□□□ -0.52
TCOF1-215ENST00000515516 LOC100289279A0A1B0GTE1 492 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 TMEM129A0AVI4 362 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 HTR3EA5X5Y0 456 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 CENPBD1B2RD01 187 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 M0R233 179 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 GSTA4O15217 222 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 SYNGR3O43761 229 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 MGRN1O60291 552 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 LMX1BO60663 402 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 CCDC22O60826 627 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 STAMBPO95630 424 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 NR2C1P13056 603 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 ACADSP16219 412 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 ZNF16P17020 682 aaPredicted RBP11.79□□□□□ -0.52
TCOF1-215ENST00000515516 AQP2P41181 271 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 UGT2B15P54855 530 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 SELENOVP59797 346 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 SELENOWP63302 87 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 PLP2Q04941 152 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 FAM166AQ6J272 317 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 ZCCHC24Q8N2G6 241 aaKnown RBP11.79□□□□□ -0.52
TCOF1-215ENST00000515516 SYT14Q8NB59 555 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 SLC30A7Q8NEW0 376 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 NOXO1Q8NFA2 376 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 OR4K5Q8NGD3 323 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 OR1J2Q8NGS2 313 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 UBASH3BQ8TF42 649 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 MCHR2Q969V1 340 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 ZNF75AQ96N20 296 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 MDFIQ99750 246 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 MRPL37Q9BZE1 423 aaKnown RBP11.79□□□□□ -0.52
TCOF1-215ENST00000515516 TPK1Q9H3S4 243 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 CCDC134Q9H6E4 229 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 CDH20Q9HBT6 801 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 ZNF224Q9NZL3 707 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 ARMCX1Q9P291 453 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 DUSP13Q9UII6 198 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 GPR160Q9UJ42 338 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 TLN2Q9Y4G6 2542 aa11.79□□□□□ -0.52
TCOF1-215ENST00000515516 JMJD1CQ15652 2540 aa11.78□□□□□ -0.52
TCOF1-215ENST00000515516 IQCMA0A1B0GVH7 501 aa11.78□□□□□ -0.52
TCOF1-215ENST00000515516 A0A1W2PPW3 197 aa11.78□□□□□ -0.52
TCOF1-215ENST00000515516 TRMUO75648 421 aaKnown RBP11.78□□□□□ -0.52
TCOF1-215ENST00000515516 FAM157CP0CG43 387 aa11.78□□□□□ -0.52
TCOF1-215ENST00000515516 ZNF23P17027 643 aa11.78□□□□□ -0.52
TCOF1-215ENST00000515516 MYBPC1Q00872 1141 aa11.78□□□□□ -0.52
TCOF1-215ENST00000515516 NRN1LQ496H8 165 aa11.78□□□□□ -0.52
TCOF1-215ENST00000515516 ZNF786Q8N393 782 aa11.78□□□□□ -0.52
TCOF1-215ENST00000515516 POU5F2Q8N7G0 328 aa11.78□□□□□ -0.52
TCOF1-215ENST00000515516 ASB10Q8WXI3 467 aa11.78□□□□□ -0.52
TCOF1-215ENST00000515516 PRRC1Q96M27 445 aa11.78□□□□□ -0.52
TCOF1-215ENST00000515516 ZNF347Q96SE7 839 aa11.78□□□□□ -0.52
TCOF1-215ENST00000515516 HOPXQ9BPY8 73 aaPredicted RBP11.78□□□□□ -0.52
TCOF1-215ENST00000515516 SYT3Q9BQG1 590 aa11.78□□□□□ -0.52
TCOF1-215ENST00000515516 FNDC11Q9BVV2 318 aa11.78□□□□□ -0.52
TCOF1-215ENST00000515516 BPESC1Q9GZL8 116 aa11.78□□□□□ -0.52
TCOF1-215ENST00000515516 EFCAB1Q9HAE3 211 aa11.78□□□□□ -0.52
TCOF1-215ENST00000515516 MED4Q9NPJ6 270 aa11.78□□□□□ -0.52
TCOF1-215ENST00000515516 C20orf141Q9NUB4 165 aa11.78□□□□□ -0.52
TCOF1-215ENST00000515516 ZNF446Q9NWS9 450 aa11.78□□□□□ -0.52
TCOF1-215ENST00000515516 IGHV4-61A0A0C4DH41 118 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 GMNCA6NCL1 334 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 NDUFAB1O14561 156 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 ZNF682O95780 498 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 IFNW1P05000 195 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 SAGP10523 405 aaPredicted RBP11.77□□□□□ -0.53
TCOF1-215ENST00000515516 COX4I1P13073 169 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 IFI30P13284 250 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 HNF1AP20823 631 aa11.77□□□□□ -0.53
TCOF1-215ENST00000515516 GIFP27352 417 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms