RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, human

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3TC1-223	ENST00000513495	HOXC12	P31275	282 aa		13.89	□□□□□ -0.19
SH3TC1-223	ENST00000513495	PEX19	P40855	299 aa		13.89	□□□□□ -0.19
SH3TC1-223	ENST00000513495	PTGES3	Q15185	160 aa	Known RBP	13.89	□□□□□ -0.19
SH3TC1-223	ENST00000513495	STK11	Q15831	433 aa		13.89	□□□□□ -0.19
SH3TC1-223	ENST00000513495	MEST	Q5EB52	335 aa		13.89	□□□□□ -0.19
SH3TC1-223	ENST00000513495	LEG1	Q6P5S2	330 aa		13.89	□□□□□ -0.19
SH3TC1-223	ENST00000513495	ZNF474	Q6S9Z5	364 aa	Predicted RBP	13.89	□□□□□ -0.19
SH3TC1-223	ENST00000513495	IQCF1	Q8N6M8	205 aa		13.89	□□□□□ -0.19
SH3TC1-223	ENST00000513495	OR4Q3	Q8NH05	313 aa		13.89	□□□□□ -0.19
SH3TC1-223	ENST00000513495	OR4K13	Q8NH42	304 aa		13.89	□□□□□ -0.19
SH3TC1-223	ENST00000513495	HDAC2	Q92769	488 aa	Known RBP	13.89	□□□□□ -0.19
SH3TC1-223	ENST00000513495	KISS1R	Q969F8	398 aa	Predicted RBP	13.89	□□□□□ -0.19
SH3TC1-223	ENST00000513495	SLC29A1	Q99808	456 aa		13.89	□□□□□ -0.19
SH3TC1-223	ENST00000513495	MRPL13	Q9BYD1	178 aa	Known RBP	13.89	□□□□□ -0.19
SH3TC1-223	ENST00000513495	GPR35	Q9HC97	309 aa		13.89	□□□□□ -0.19
SH3TC1-223	ENST00000513495	GALNT8	Q9NY28	637 aa		13.89	□□□□□ -0.19
SH3TC1-223	ENST00000513495	SLC22A23	A1A5C7	686 aa		13.88	□□□□□ -0.19
SH3TC1-223	ENST00000513495	C16orf97	H3BN30	126 aa		13.88	□□□□□ -0.19
SH3TC1-223	ENST00000513495	RPL36A-HNRNPH2	H7BZ11	118 aa		13.88	□□□□□ -0.19
SH3TC1-223	ENST00000513495	CRABP1	P29762	137 aa		13.88	□□□□□ -0.19
SH3TC1-223	ENST00000513495	PCYT1A	P49585	367 aa		13.88	□□□□□ -0.19
SH3TC1-223	ENST00000513495	CDK5	Q00535	292 aa		13.88	□□□□□ -0.19
SH3TC1-223	ENST00000513495	SNAPC1	Q16533	368 aa		13.88	□□□□□ -0.19
SH3TC1-223	ENST00000513495	ZIK1	Q3SY52	487 aa	Predicted RBP	13.88	□□□□□ -0.19
SH3TC1-223	ENST00000513495	OR7E24	Q6IFN5	339 aa		13.88	□□□□□ -0.19
SH3TC1-223	ENST00000513495	GABRG1	Q8N1C3	465 aa		13.88	□□□□□ -0.19
SH3TC1-223	ENST00000513495	STEAP2	Q8NFT2	490 aa		13.88	□□□□□ -0.19
SH3TC1-223	ENST00000513495	NMNAT3	Q96T66	252 aa		13.88	□□□□□ -0.19
SH3TC1-223	ENST00000513495	SYT4	Q9H2B2	425 aa		13.88	□□□□□ -0.19
SH3TC1-223	ENST00000513495	TOR3A	Q9H497	397 aa		13.88	□□□□□ -0.19
SH3TC1-223	ENST00000513495	CMC2	Q9NRP2	79 aa		13.88	□□□□□ -0.19
SH3TC1-223	ENST00000513495	VSX1	Q9NZR4	365 aa	Predicted RBP	13.88	□□□□□ -0.19
SH3TC1-223	ENST00000513495	GPR52	Q9Y2T5	361 aa		13.88	□□□□□ -0.19
SH3TC1-223	ENST00000513495	UBR5	O95071	2799 aa	Predicted RBP	13.88	□□□□□ -0.19
SH3TC1-223	ENST00000513495	ZAR1L	A6NP61	321 aa		13.87	□□□□□ -0.19
SH3TC1-223	ENST00000513495		H7C1C5	153 aa		13.87	□□□□□ -0.19
SH3TC1-223	ENST00000513495	DHH	O43323	396 aa		13.87	□□□□□ -0.19
SH3TC1-223	ENST00000513495	EDNRA	P25101	427 aa		13.87	□□□□□ -0.19
SH3TC1-223	ENST00000513495	CDC42	P60953	191 aa		13.87	□□□□□ -0.19
SH3TC1-223	ENST00000513495	LCN6	P62502	163 aa		13.87	□□□□□ -0.19
SH3TC1-223	ENST00000513495	RUNX1T1	Q06455	604 aa		13.87	□□□□□ -0.19
SH3TC1-223	ENST00000513495	LGALS3BP	Q08380	585 aa		13.87	□□□□□ -0.19
SH3TC1-223	ENST00000513495	HIST3H3	Q16695	136 aa		13.87	□□□□□ -0.19
SH3TC1-223	ENST00000513495	CEACAM16	Q2WEN9	425 aa		13.87	□□□□□ -0.19
SH3TC1-223	ENST00000513495	SFRP5	Q5T4F7	317 aa		13.87	□□□□□ -0.19
SH3TC1-223	ENST00000513495	SLX4IP	Q5VYV7	408 aa		13.87	□□□□□ -0.19
SH3TC1-223	ENST00000513495	TMEM236	Q5W0B7	351 aa		13.87	□□□□□ -0.19
SH3TC1-223	ENST00000513495	KLHL24	Q6TFL4	600 aa		13.87	□□□□□ -0.19
SH3TC1-223	ENST00000513495	BHLHA15	Q7RTS1	189 aa	Predicted RBP	13.87	□□□□□ -0.19
SH3TC1-223	ENST00000513495	CXorf67	Q86X51	503 aa	Predicted RBP	13.87	□□□□□ -0.19
SH3TC1-223	ENST00000513495	C1orf162	Q8NEQ5	155 aa	Predicted RBP	13.87	□□□□□ -0.19
SH3TC1-223	ENST00000513495	SDR9C7	Q8NEX9	313 aa		13.87	□□□□□ -0.19
SH3TC1-223	ENST00000513495	OR2T4	Q8NH00	348 aa		13.87	□□□□□ -0.19
SH3TC1-223	ENST00000513495	MCHR2	Q969V1	340 aa		13.87	□□□□□ -0.19
SH3TC1-223	ENST00000513495	OTULIN	Q96BN8	352 aa		13.87	□□□□□ -0.19
SH3TC1-223	ENST00000513495	RASSF4	Q9H2L5	321 aa		13.87	□□□□□ -0.19
SH3TC1-223	ENST00000513495	RERGL	Q9H628	205 aa		13.87	□□□□□ -0.19
SH3TC1-223	ENST00000513495	IMPAD1	Q9NX62	359 aa		13.87	□□□□□ -0.19
SH3TC1-223	ENST00000513495	TVP23B	Q9NYZ1	205 aa		13.87	□□□□□ -0.19
SH3TC1-223	ENST00000513495	KLF2	Q9Y5W3	355 aa	Predicted RBP	13.87	□□□□□ -0.19
SH3TC1-223	ENST00000513495	CLEC18A	A5D8T8	446 aa		13.86	□□□□□ -0.19
SH3TC1-223	ENST00000513495	ZNF99	A8MXY4	864 aa	Predicted RBP	13.86	□□□□□ -0.19
SH3TC1-223	ENST00000513495	PRR23D1	E9PI22	279 aa	Predicted RBP	13.86	□□□□□ -0.19
SH3TC1-223	ENST00000513495	SLC16A7	O60669	478 aa		13.86	□□□□□ -0.19
SH3TC1-223	ENST00000513495	KHDRBS3	O75525	346 aa	Known RBP	13.86	□□□□□ -0.19
SH3TC1-223	ENST00000513495	LYZL6	O75951	148 aa		13.86	□□□□□ -0.19
SH3TC1-223	ENST00000513495	FARS2	O95363	451 aa	Known RBP	13.86	□□□□□ -0.19
SH3TC1-223	ENST00000513495	SNAP29	O95721	258 aa		13.86	□□□□□ -0.19
SH3TC1-223	ENST00000513495	PRR23D2	P0DMB1	279 aa	Predicted RBP	13.86	□□□□□ -0.19
SH3TC1-223	ENST00000513495	PPP3CB	P16298	524 aa		13.86	□□□□□ -0.19
SH3TC1-223	ENST00000513495	PSMB1	P20618	241 aa	Known RBP	13.86	□□□□□ -0.19
SH3TC1-223	ENST00000513495	COX5A	P20674	150 aa		13.86	□□□□□ -0.19
SH3TC1-223	ENST00000513495	IGHV1-2	P23083	117 aa		13.86	□□□□□ -0.19
SH3TC1-223	ENST00000513495	CDKN2A	P42771	156 aa	Known RBP	13.86	□□□□□ -0.19
SH3TC1-223	ENST00000513495	SORD	Q00796	357 aa		13.86	□□□□□ -0.19
SH3TC1-223	ENST00000513495	C10orf128	Q5T292	105 aa		13.86	□□□□□ -0.19
SH3TC1-223	ENST00000513495	C9orf135	Q5VTT2	229 aa		13.86	□□□□□ -0.19
SH3TC1-223	ENST00000513495	ANKRD16	Q6P6B7	361 aa		13.86	□□□□□ -0.19
SH3TC1-223	ENST00000513495	CLEC18B	Q6UXF7	455 aa		13.86	□□□□□ -0.19
SH3TC1-223	ENST00000513495	SSX8	Q7RTT4	187 aa		13.86	□□□□□ -0.19
SH3TC1-223	ENST00000513495	DEPDC4	Q8N2C3	294 aa		13.86	□□□□□ -0.19
SH3TC1-223	ENST00000513495	CLEC18C	Q8NCF0	446 aa		13.86	□□□□□ -0.19
SH3TC1-223	ENST00000513495	NSMAF	Q92636	917 aa		13.86	□□□□□ -0.19
SH3TC1-223	ENST00000513495	RPRD1B	Q9NQG5	326 aa	Known RBP	13.86	□□□□□ -0.19
SH3TC1-223	ENST00000513495	NDRG3	Q9UGV2	375 aa		13.86	□□□□□ -0.19
SH3TC1-223	ENST00000513495	GMPPB	Q9Y5P6	360 aa		13.86	□□□□□ -0.19
SH3TC1-223	ENST00000513495	FREM1	Q5H8C1	2179 aa		13.86	□□□□□ -0.19
SH3TC1-223	ENST00000513495		A0A1W2PPL8	197 aa		13.85	□□□□□ -0.19
SH3TC1-223	ENST00000513495	SURF4	O15260	269 aa		13.85	□□□□□ -0.19
SH3TC1-223	ENST00000513495	RAD51D	O75771	328 aa		13.85	□□□□□ -0.19
SH3TC1-223	ENST00000513495	SLC2A10	O95528	541 aa		13.85	□□□□□ -0.19
SH3TC1-223	ENST00000513495	NPR2	P20594	1047 aa		13.85	□□□□□ -0.19
SH3TC1-223	ENST00000513495	UGT2B10	P36537	528 aa		13.85	□□□□□ -0.19
SH3TC1-223	ENST00000513495	PTDSS1	P48651	473 aa	Known RBP	13.85	□□□□□ -0.19
SH3TC1-223	ENST00000513495	CENPA	P49450	140 aa		13.85	□□□□□ -0.19
SH3TC1-223	ENST00000513495	ARF1	P84077	181 aa	Known RBP	13.85	□□□□□ -0.19
SH3TC1-223	ENST00000513495	FMOD	Q06828	376 aa		13.85	□□□□□ -0.19
SH3TC1-223	ENST00000513495	FAM27E3	Q08E93	113 aa		13.85	□□□□□ -0.19
SH3TC1-223	ENST00000513495	CRMP1	Q14194	572 aa		13.85	□□□□□ -0.19
SH3TC1-223	ENST00000513495	PHYHD1	Q5SRE7	291 aa		13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms