RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 GDF2Q9UK05 429 aaPredicted RBP11.79□□□□□ -0.52
SNF8-206ENST00000509989 POFUT2Q9Y2G5 429 aa11.79□□□□□ -0.52
SNF8-206ENST00000509989 UGT2A1Q9Y4X1 527 aa11.79□□□□□ -0.52
SNF8-206ENST00000509989 A0A1W2PRG6 482 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 SH3PXD2BA1X283 911 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 OVOL3O00110 214 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 ACOT8O14734 319 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 DHHO43323 396 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 SMPD2O60906 423 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 GMNNO75496 209 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 WNT11O96014 354 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 SCG5P05408 212 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 FABP3P05413 133 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 CD79AP11912 226 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 PTAFRP25105 342 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 ACVR1BP36896 505 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 CAPZA2P47755 286 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 SLC9A3P48764 834 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 PTH2RP49190 550 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 SH3BGRP55822 239 aaPredicted RBP11.78□□□□□ -0.52
SNF8-206ENST00000509989 CLRN1P58418 232 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 UBE2NP61088 152 aaKnown RBP11.78□□□□□ -0.52
SNF8-206ENST00000509989 NAAAQ02083 359 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 HGFACQ04756 655 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 TRIM25Q14258 630 aaKnown RBP11.78□□□□□ -0.52
SNF8-206ENST00000509989 ETFDHQ16134 617 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 LCN8Q6JVE9 175 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 SLC25A47Q6Q0C1 308 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 KLHL17Q6TDP4 642 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 ZNF627Q7L945 461 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 ZER1Q7Z7L7 766 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 OAFQ86UD1 273 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 CYP4Z1Q86W10 505 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 TGIF2LYQ8IUE0 185 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 RNF113BQ8IZP6 322 aaKnown RBP11.78□□□□□ -0.52
SNF8-206ENST00000509989 CIARTQ8N365 385 aaPredicted RBP11.78□□□□□ -0.52
SNF8-206ENST00000509989 NSMAFQ92636 917 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 Q96M85 177 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 FOXN4Q96NZ1 517 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 TRAF4Q9BUZ4 470 aaPredicted RBP11.78□□□□□ -0.52
SNF8-206ENST00000509989 KATNB1Q9BVA0 655 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 TXNIPQ9H3M7 391 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 IL1RAPQ9NPH3 570 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 TMEM38BQ9NVV0 291 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 NDE1Q9NXR1 346 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 SIGLEC7Q9Y286 467 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 FAM32AQ9Y421 112 aaKnown RBP11.78□□□□□ -0.52
SNF8-206ENST00000509989 ATP23Q9Y6H3 246 aa11.78□□□□□ -0.52
SNF8-206ENST00000509989 GADD45GO95257 159 aa11.77□□□□□ -0.53
SNF8-206ENST00000509989 IGKV3-15P01624 115 aa11.77□□□□□ -0.53
SNF8-206ENST00000509989 IGHMP01871 453 aa11.77□□□□□ -0.53
SNF8-206ENST00000509989 CBR1P16152 277 aa11.77□□□□□ -0.53
SNF8-206ENST00000509989 IFNA8P32881 189 aa11.77□□□□□ -0.53
SNF8-206ENST00000509989 GIPRP48546 466 aa11.77□□□□□ -0.53
SNF8-206ENST00000509989 MNAT1P51948 309 aa11.77□□□□□ -0.53
SNF8-206ENST00000509989 RPL27P61353 136 aaKnown RBP11.77□□□□□ -0.53
SNF8-206ENST00000509989 ZBED5Q49AG3 693 aa11.77□□□□□ -0.53
SNF8-206ENST00000509989 MESTQ5EB52 335 aa11.77□□□□□ -0.53
SNF8-206ENST00000509989 Q5PR19 223 aa11.77□□□□□ -0.53
SNF8-206ENST00000509989 C11orf71Q6IPW1 123 aa11.77□□□□□ -0.53
SNF8-206ENST00000509989 PGM2L1Q6PCE3 622 aa11.77□□□□□ -0.53
SNF8-206ENST00000509989 DHFR2Q86XF0 187 aa11.77□□□□□ -0.53
SNF8-206ENST00000509989 ZNF584Q8IVC4 421 aa11.77□□□□□ -0.53
SNF8-206ENST00000509989 TMEM171Q8WVE6 324 aa11.77□□□□□ -0.53
SNF8-206ENST00000509989 NABP1Q96AH0 204 aa11.77□□□□□ -0.53
SNF8-206ENST00000509989 RASD2Q96D21 266 aa11.77□□□□□ -0.53
SNF8-206ENST00000509989 RSRC1Q96IZ7 334 aaKnown RBP11.77□□□□□ -0.53
SNF8-206ENST00000509989 SMR3AQ99954 134 aa11.77□□□□□ -0.53
SNF8-206ENST00000509989 TMUB1Q9BVT8 246 aa11.77□□□□□ -0.53
SNF8-206ENST00000509989 ANKRD19PQ9H560 264 aa11.77□□□□□ -0.53
SNF8-206ENST00000509989 B3GAT2Q9NPZ5 323 aa11.77□□□□□ -0.53
SNF8-206ENST00000509989 POU2F3Q9UKI9 436 aa11.77□□□□□ -0.53
SNF8-206ENST00000509989 ZANQ9Y493 2812 aa11.76□□□□□ -0.53
SNF8-206ENST00000509989 TRIM64A6NGJ6 449 aa11.76□□□□□ -0.53
SNF8-206ENST00000509989 TRIM64BA6NI03 449 aa11.76□□□□□ -0.53
SNF8-206ENST00000509989 IGHG1P01857 330 aa11.76□□□□□ -0.53
SNF8-206ENST00000509989 IGFBP1P08833 259 aaPredicted RBP11.76□□□□□ -0.53
SNF8-206ENST00000509989 CCL2P13500 99 aa11.76□□□□□ -0.53
SNF8-206ENST00000509989 ZNF14P17017 642 aaPredicted RBP11.76□□□□□ -0.53
SNF8-206ENST00000509989 TTKP33981 857 aa11.76□□□□□ -0.53
SNF8-206ENST00000509989 MAGEA2P43356 314 aa11.76□□□□□ -0.53
SNF8-206ENST00000509989 PTDSS1P48651 473 aaKnown RBP11.76□□□□□ -0.53
SNF8-206ENST00000509989 ZNF133P52736 654 aaPredicted RBP11.76□□□□□ -0.53
SNF8-206ENST00000509989 RAB39AQ14964 217 aa11.76□□□□□ -0.53
SNF8-206ENST00000509989 MST1LQ2TV78 715 aa11.76□□□□□ -0.53
SNF8-206ENST00000509989 FAM122BQ7Z309 247 aa11.76□□□□□ -0.53
SNF8-206ENST00000509989 LRRC18Q8N456 261 aa11.76□□□□□ -0.53
SNF8-206ENST00000509989 SLC22A24Q8N4F4 322 aa11.76□□□□□ -0.53
SNF8-206ENST00000509989 PAQR4Q8N4S7 273 aaPredicted RBP11.76□□□□□ -0.53
SNF8-206ENST00000509989 OR9Q2Q8NGE9 314 aa11.76□□□□□ -0.53
SNF8-206ENST00000509989 OR4C15Q8NGM1 316 aa11.76□□□□□ -0.53
SNF8-206ENST00000509989 PIGTQ969N2 578 aa11.76□□□□□ -0.53
SNF8-206ENST00000509989 DHRS9Q9BPW9 319 aa11.76□□□□□ -0.53
SNF8-206ENST00000509989 CADM1Q9BY67 442 aaKnown RBP11.76□□□□□ -0.53
SNF8-206ENST00000509989 C1orf21Q9H246 121 aa11.76□□□□□ -0.53
SNF8-206ENST00000509989 GSX1Q9H4S2 264 aaPredicted RBP11.76□□□□□ -0.53
SNF8-206ENST00000509989 OBP2BQ9NPH6 170 aa11.76□□□□□ -0.53
SNF8-206ENST00000509989 ZNF701Q9NV72 531 aaPredicted RBP11.76□□□□□ -0.53
SNF8-206ENST00000509989 PRPF19Q9UMS4 504 aaKnown RBP11.76□□□□□ -0.53
SNF8-206ENST00000509989 LYVE1Q9Y5Y7 322 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms