RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 PIGFQ07326 219 aa14.01□□□□□ -0.17
PDLIM5-212ENST00000509333 DGCR6Q14129 220 aa14.01□□□□□ -0.17
PDLIM5-212ENST00000509333 ZNF730Q6ZMV8 503 aa14.01□□□□□ -0.17
PDLIM5-212ENST00000509333 MYPOPQ86VE0 399 aaPredicted RBP14.01□□□□□ -0.17
PDLIM5-212ENST00000509333 CDK20Q8IZL9 346 aa14.01□□□□□ -0.17
PDLIM5-212ENST00000509333 CIARTQ8N365 385 aaPredicted RBP14.01□□□□□ -0.17
PDLIM5-212ENST00000509333 SYT14Q8NB59 555 aa14.01□□□□□ -0.17
PDLIM5-212ENST00000509333 IL17RDQ8NFM7 739 aa14.01□□□□□ -0.17
PDLIM5-212ENST00000509333 FGFBP3Q8TAT2 258 aa14.01□□□□□ -0.17
PDLIM5-212ENST00000509333 GTPBP3Q969Y2 492 aaKnown RBP14.01□□□□□ -0.17
PDLIM5-212ENST00000509333 C18orf12Q96KH6 178 aa14.01□□□□□ -0.17
PDLIM5-212ENST00000509333 ZNF347Q96SE7 839 aa14.01□□□□□ -0.17
PDLIM5-212ENST00000509333 FUZQ9BT04 418 aa14.01□□□□□ -0.17
PDLIM5-212ENST00000509333 GSX1Q9H4S2 264 aaPredicted RBP14.01□□□□□ -0.17
PDLIM5-212ENST00000509333 NOX3Q9HBY0 568 aa14.01□□□□□ -0.17
PDLIM5-212ENST00000509333 NDE1Q9NXR1 346 aa14.01□□□□□ -0.17
PDLIM5-212ENST00000509333 ZFHX3Q15911 3703 aa14□□□□□ -0.17
PDLIM5-212ENST00000509333 DIRAS1O95057 198 aa14□□□□□ -0.17
PDLIM5-212ENST00000509333 PATE4P0C8F1 98 aa14□□□□□ -0.17
PDLIM5-212ENST00000509333 B4GALT1P15291 398 aa14□□□□□ -0.17
PDLIM5-212ENST00000509333 ZNF26P17031 533 aaPredicted RBP14□□□□□ -0.17
PDLIM5-212ENST00000509333 SLC9A3P48764 834 aa14□□□□□ -0.17
PDLIM5-212ENST00000509333 IDH3GP51553 393 aaPredicted RBP14□□□□□ -0.17
PDLIM5-212ENST00000509333 CTXN1P60606 82 aa14□□□□□ -0.17
PDLIM5-212ENST00000509333 RAB1AP62820 205 aa14□□□□□ -0.17
PDLIM5-212ENST00000509333 MXRA7P84157 204 aa14□□□□□ -0.17
PDLIM5-212ENST00000509333 TAF11Q15544 211 aa14□□□□□ -0.17
PDLIM5-212ENST00000509333 SWI5Q1ZZU3 235 aa14□□□□□ -0.17
PDLIM5-212ENST00000509333 ALG10Q5BKT4 473 aa14□□□□□ -0.17
PDLIM5-212ENST00000509333 RRM2BQ7LG56 351 aa14□□□□□ -0.17
PDLIM5-212ENST00000509333 OAFQ86UD1 273 aa14□□□□□ -0.17
PDLIM5-212ENST00000509333 SLC22A24Q8N4F4 322 aa14□□□□□ -0.17
PDLIM5-212ENST00000509333 OR4F15Q8NGB8 312 aa14□□□□□ -0.17
PDLIM5-212ENST00000509333 HDAC2Q92769 488 aaKnown RBP14□□□□□ -0.17
PDLIM5-212ENST00000509333 DHRS1Q96LJ7 313 aa14□□□□□ -0.17
PDLIM5-212ENST00000509333 NSMCE2Q96MF7 247 aa14□□□□□ -0.17
PDLIM5-212ENST00000509333 BDH2Q9BUT1 245 aa14□□□□□ -0.17
PDLIM5-212ENST00000509333 DENND2DQ9H6A0 471 aaPredicted RBP14□□□□□ -0.17
PDLIM5-212ENST00000509333 TMEM38BQ9NVV0 291 aa14□□□□□ -0.17
PDLIM5-212ENST00000509333 MAGEL2Q9UJ55 1249 aa14□□□□□ -0.17
PDLIM5-212ENST00000509333 GDF2Q9UK05 429 aaPredicted RBP14□□□□□ -0.17
PDLIM5-212ENST00000509333 hCG_2039718K7EN88 272 aa13.99□□□□□ -0.17
PDLIM5-212ENST00000509333 CDC42EP2O14613 210 aa13.99□□□□□ -0.17
PDLIM5-212ENST00000509333 ARPC2O15144 300 aa13.99□□□□□ -0.17
PDLIM5-212ENST00000509333 IGHV4-39P01824 125 aa13.99□□□□□ -0.17
PDLIM5-212ENST00000509333 OR8G3PP0DMU2 310 aa13.99□□□□□ -0.17
PDLIM5-212ENST00000509333 SAGP10523 405 aaPredicted RBP13.99□□□□□ -0.17
PDLIM5-212ENST00000509333 CD79AP11912 226 aa13.99□□□□□ -0.17
PDLIM5-212ENST00000509333 ZNF35P13682 527 aa13.99□□□□□ -0.17
PDLIM5-212ENST00000509333 CAPZA2P47755 286 aa13.99□□□□□ -0.17
PDLIM5-212ENST00000509333 DAP3P51398 398 aaKnown RBP13.99□□□□□ -0.17
PDLIM5-212ENST00000509333 CLRN1P58418 232 aa13.99□□□□□ -0.17
PDLIM5-212ENST00000509333 RPL27P61353 136 aaKnown RBP13.99□□□□□ -0.17
PDLIM5-212ENST00000509333 MYBPC1Q00872 1141 aa13.99□□□□□ -0.17
PDLIM5-212ENST00000509333 SEC23BQ15437 767 aa13.99□□□□□ -0.17
PDLIM5-212ENST00000509333 DNM1P46Q6ZS02 220 aa13.99□□□□□ -0.17
PDLIM5-212ENST00000509333 RINLQ6ZS11 566 aa13.99□□□□□ -0.17
PDLIM5-212ENST00000509333 KCNK17Q96T54 332 aa13.99□□□□□ -0.17
PDLIM5-212ENST00000509333 STX18Q9P2W9 335 aaKnown RBP13.99□□□□□ -0.17
PDLIM5-212ENST00000509333 ARFGEF3Q5TH69 2177 aa13.99□□□□□ -0.17
PDLIM5-212ENST00000509333 NIPBLQ6KC79 2804 aaeCLIP13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 TRAV27A0A087WT01 109 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 IGHV2OR16-5A0A0B4J2B6 119 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 TRBV4-1A0A0J9YWV2 114 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 TRIM64A6NGJ6 449 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 TRIM64BA6NI03 449 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 MCIDASD6RGH6 385 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 MGRN1O60291 552 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 IGHMP01871 453 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 INHBBP09529 407 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 ZNF14P17017 642 aaPredicted RBP13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 ITGA2P17301 1181 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 CALB2P22676 271 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 SERPINF1P36955 418 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 OMPP47874 163 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 GIPRP48546 466 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 MS4A2Q01362 244 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 GSG1Q2KHT4 349 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 NRN1LQ496H8 165 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 ZBED5Q49AG3 693 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 C10orf128Q5T292 105 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 SLC25A47Q6Q0C1 308 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 OR13C2Q8NGS9 318 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 MS4A3Q96HJ5 214 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 RBP7Q96R05 134 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 SMR3AQ99954 134 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 SH3GL3Q99963 347 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 KCNS3Q9BQ31 491 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 CACNG6Q9BXT2 260 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 IL1RAPQ9NPH3 570 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 CA10Q9NS85 328 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 TAS2R1Q9NYW7 299 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 ACTR3BQ9P1U1 418 aa13.98□□□□□ -0.17
PDLIM5-212ENST00000509333 IGKV1D-43A0A0B4J1Z2 117 aa13.97□□□□□ -0.17
PDLIM5-212ENST00000509333 H7C1Q1 480 aa13.97□□□□□ -0.17
PDLIM5-212ENST00000509333 SERPINA5P05154 406 aa13.97□□□□□ -0.17
PDLIM5-212ENST00000509333 NR4A1P22736 598 aa13.97□□□□□ -0.17
PDLIM5-212ENST00000509333 THBS4P35443 961 aa13.97□□□□□ -0.17
PDLIM5-212ENST00000509333 ACVR1BP36896 505 aa13.97□□□□□ -0.17
PDLIM5-212ENST00000509333 GPR4P46093 362 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms