RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 IGHG1P01857 330 aa12.8□□□□□ -0.36
UBE2D3-228ENST00000508974 IFNW1P05000 195 aa12.8□□□□□ -0.36
UBE2D3-228ENST00000508974 IFI30P13284 250 aa12.8□□□□□ -0.36
UBE2D3-228ENST00000508974 ZNF14P17017 642 aaPredicted RBP12.8□□□□□ -0.36
UBE2D3-228ENST00000508974 GSK3BP49841 420 aa12.8□□□□□ -0.36
UBE2D3-228ENST00000508974 ST3GAL3Q11203 375 aa12.8□□□□□ -0.36
UBE2D3-228ENST00000508974 LAPTM4AQ15012 233 aa12.8□□□□□ -0.36
UBE2D3-228ENST00000508974 ZNF627Q7L945 461 aa12.8□□□□□ -0.36
UBE2D3-228ENST00000508974 IGFN1Q86VF2 1251 aa12.8□□□□□ -0.36
UBE2D3-228ENST00000508974 PRIMA1Q86XR5 153 aa12.8□□□□□ -0.36
UBE2D3-228ENST00000508974 CDK20Q8IZL9 346 aa12.8□□□□□ -0.36
UBE2D3-228ENST00000508974 RBM15BQ8NDT2 890 aaKnown RBP12.8□□□□□ -0.36
UBE2D3-228ENST00000508974 NOXO1Q8NFA2 376 aa12.8□□□□□ -0.36
UBE2D3-228ENST00000508974 OR4K5Q8NGD3 323 aa12.8□□□□□ -0.36
UBE2D3-228ENST00000508974 ASB10Q8WXI3 467 aa12.8□□□□□ -0.36
UBE2D3-228ENST00000508974 ZNF75AQ96N20 296 aa12.8□□□□□ -0.36
UBE2D3-228ENST00000508974 OR51B6Q9H340 312 aa12.8□□□□□ -0.36
UBE2D3-228ENST00000508974 PLK3Q9H4B4 646 aa12.8□□□□□ -0.36
UBE2D3-228ENST00000508974 ZNF442Q9H7R0 627 aa12.8□□□□□ -0.36
UBE2D3-228ENST00000508974 EFCAB1Q9HAE3 211 aa12.8□□□□□ -0.36
UBE2D3-228ENST00000508974 DYNLRB1Q9NP97 96 aa12.8□□□□□ -0.36
UBE2D3-228ENST00000508974 TMEM38BQ9NVV0 291 aa12.8□□□□□ -0.36
UBE2D3-228ENST00000508974 FZR1Q9UM11 496 aa12.8□□□□□ -0.36
UBE2D3-228ENST00000508974 SONP18583 2426 aaKnown RBP12.8□□□□□ -0.36
UBE2D3-228ENST00000508974 CD5LO43866 347 aa12.79□□□□□ -0.36
UBE2D3-228ENST00000508974 TRMUO75648 421 aaKnown RBP12.79□□□□□ -0.36
UBE2D3-228ENST00000508974 PDE5AO76074 875 aa12.79□□□□□ -0.36
UBE2D3-228ENST00000508974 SLC2A10O95528 541 aa12.79□□□□□ -0.36
UBE2D3-228ENST00000508974 OR8G3PP0DMU2 310 aa12.79□□□□□ -0.36
UBE2D3-228ENST00000508974 THRBP10828 461 aa12.79□□□□□ -0.36
UBE2D3-228ENST00000508974 SLC25A16P16260 332 aa12.79□□□□□ -0.36
UBE2D3-228ENST00000508974 NR4A1P22736 598 aa12.79□□□□□ -0.36
UBE2D3-228ENST00000508974 PDLIM4P50479 330 aa12.79□□□□□ -0.36
UBE2D3-228ENST00000508974 DAP3P51398 398 aaKnown RBP12.79□□□□□ -0.36
UBE2D3-228ENST00000508974 GALK2Q01415 458 aa12.79□□□□□ -0.36
UBE2D3-228ENST00000508974 FMODQ06828 376 aa12.79□□□□□ -0.36
UBE2D3-228ENST00000508974 GGTLC2Q14390 218 aa12.79□□□□□ -0.36
UBE2D3-228ENST00000508974 EFNB3Q15768 340 aa12.79□□□□□ -0.36
UBE2D3-228ENST00000508974 GKAP1Q5VSY0 366 aaPredicted RBP12.79□□□□□ -0.36
UBE2D3-228ENST00000508974 FKBP9P1Q75LS8 142 aa12.79□□□□□ -0.36
UBE2D3-228ENST00000508974 PIWIL3Q7Z3Z3 882 aaKnown RBP12.79□□□□□ -0.36
UBE2D3-228ENST00000508974 LRRC18Q8N456 261 aa12.79□□□□□ -0.36
UBE2D3-228ENST00000508974 MCHR2Q969V1 340 aa12.79□□□□□ -0.36
UBE2D3-228ENST00000508974 FAM162AQ96A26 154 aa12.79□□□□□ -0.36
UBE2D3-228ENST00000508974 BPIFA2Q96DR5 249 aa12.79□□□□□ -0.36
UBE2D3-228ENST00000508974 HSH2DQ96JZ2 352 aa12.79□□□□□ -0.36
UBE2D3-228ENST00000508974 HOPXQ9BPY8 73 aaPredicted RBP12.79□□□□□ -0.36
UBE2D3-228ENST00000508974 KCTD14Q9BQ13 255 aaPredicted RBP12.79□□□□□ -0.36
UBE2D3-228ENST00000508974 FNDC11Q9BVV2 318 aa12.79□□□□□ -0.36
UBE2D3-228ENST00000508974 TPK1Q9H3S4 243 aa12.79□□□□□ -0.36
UBE2D3-228ENST00000508974 RNF121Q9H920 327 aa12.79□□□□□ -0.36
UBE2D3-228ENST00000508974 AP3M1Q9Y2T2 418 aa12.79□□□□□ -0.36
UBE2D3-228ENST00000508974 TRAV27A0A087WT01 109 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 KIAA1324LA8MWY0 1029 aaPredicted RBP12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 VSTM5A8MXK1 200 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 FFAR1O14842 300 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 FARS2O95363 451 aaKnown RBP12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 CSF3P09919 207 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 SAGP10523 405 aaPredicted RBP12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 CCL2P13500 99 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 ACADSP16219 412 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 MAKP20794 623 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 IFNA8P32881 189 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 PPOXP50336 477 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 ZNF84P51523 738 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 GYS2P54840 703 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 PSME3P61289 254 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 CD47Q08722 323 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 MSMPQ1L6U9 139 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 TMEM249Q2WGJ8 235 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 IFI44LQ53G44 452 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 ALG10Q5BKT4 473 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 C8orf82Q6P1X6 216 aaPredicted RBP12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 THSD4Q6ZMP0 1018 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 ZNF584Q8IVC4 421 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 NRMQ8IXM6 262 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 RNF148Q8N7C7 305 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 IL17RDQ8NFM7 739 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 OR51A7Q8NH64 312 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 GEMIN6Q8WXD5 167 aaKnown RBP12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 TNFRSF13CQ96RJ3 184 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 SYT3Q9BQG1 590 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 PIMREGQ9BSJ6 248 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 MRPL37Q9BZE1 423 aaKnown RBP12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 MAN2C1Q9NTJ4 1040 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 EGFL7Q9UHF1 273 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 ADAM21Q9UKJ8 722 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 CMAHPQ9Y471 501 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 JMJD1CQ15652 2540 aa12.78□□□□□ -0.36
UBE2D3-228ENST00000508974 ANK3Q12955 4377 aaKnown RBP12.77□□□□□ -0.36
UBE2D3-228ENST00000508974 TMEM129A0AVI4 362 aa12.77□□□□□ -0.37
UBE2D3-228ENST00000508974 CRLF1O75462 422 aa12.77□□□□□ -0.37
UBE2D3-228ENST00000508974 ADRA2AP08913 450 aa12.77□□□□□ -0.37
UBE2D3-228ENST00000508974 FAM157BP0CG42 384 aa12.77□□□□□ -0.37
UBE2D3-228ENST00000508974 ZNF35P13682 527 aa12.77□□□□□ -0.37
UBE2D3-228ENST00000508974 ZNF16P17020 682 aaPredicted RBP12.77□□□□□ -0.37
UBE2D3-228ENST00000508974 CDAP32320 146 aa12.77□□□□□ -0.37
UBE2D3-228ENST00000508974 GPR4P46093 362 aa12.77□□□□□ -0.37
UBE2D3-228ENST00000508974 LOXL1Q08397 574 aaPredicted RBP12.77□□□□□ -0.37
UBE2D3-228ENST00000508974 TRAM2Q15035 370 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms