RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 TSPAN32Q96QS1 320 aa7.57□□□□□ -1.2
SNCA-211ENST00000508895 GPX7Q96SL4 187 aaPredicted RBP7.57□□□□□ -1.2
SNCA-211ENST00000508895 CCL19Q99731 98 aa7.57□□□□□ -1.2
SNCA-211ENST00000508895 EMC6Q9BV81 110 aa7.57□□□□□ -1.2
SNCA-211ENST00000508895 HDHD5Q9BXW7 423 aa7.57□□□□□ -1.2
SNCA-211ENST00000508895 NTN4Q9HB63 628 aa7.57□□□□□ -1.2
SNCA-211ENST00000508895 KRCC1Q9NPI7 259 aaPredicted RBP7.57□□□□□ -1.2
SNCA-211ENST00000508895 SLC17A5Q9NRA2 495 aa7.57□□□□□ -1.2
SNCA-211ENST00000508895 ARMC1Q9NVT9 282 aa7.57□□□□□ -1.2
SNCA-211ENST00000508895 BEX4Q9NWD9 120 aaPredicted RBP7.57□□□□□ -1.2
SNCA-211ENST00000508895 ASB6Q9NWX5 421 aa7.57□□□□□ -1.2
SNCA-211ENST00000508895 DNAJB9Q9UBS3 223 aa7.57□□□□□ -1.2
SNCA-211ENST00000508895 TMCC3Q9ULS5 477 aa7.57□□□□□ -1.2
SNCA-211ENST00000508895 MAGED1Q9Y5V3 778 aaPredicted RBP7.57□□□□□ -1.2
SNCA-211ENST00000508895 COL6A5A8TX70 2615 aa7.57□□□□□ -1.2
SNCA-211ENST00000508895 SONP18583 2426 aaKnown RBP7.57□□□□□ -1.2
SNCA-211ENST00000508895 SLC35F4A4IF30 521 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 ARRDC5A6NEK1 342 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 ERICH4A6NGS2 130 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 UNC119BA6NIH7 251 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 ANKRD65E5RJM6 399 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 OVOL3O00110 214 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 ENTPD5O75356 428 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 DEAF1O75398 565 aaPredicted RBP7.56□□□□□ -1.2
SNCA-211ENST00000508895 SEC14L2O76054 403 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 CCNB2O95067 398 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 CNOT4O95628 575 aaKnown RBP7.56□□□□□ -1.2
SNCA-211ENST00000508895 TP53P04637 393 aaPredicted RBP7.56□□□□□ -1.2
SNCA-211ENST00000508895 HIST1H2ABP04908 130 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 CELA3BP08861 270 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 PGA4P0DJD7 388 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 PGA3P0DJD8 388 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 CDKN1AP38936 164 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 PTH2RP49190 550 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 RUNX1T1Q06455 604 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 TSPAN31Q12999 210 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 TOP3AQ13472 1001 aaPredicted RBP7.56□□□□□ -1.2
SNCA-211ENST00000508895 GK3PQ14409 553 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 ATP6AP1Q15904 470 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 MICAQ29983 383 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 ANKDD1AQ495B1 522 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 ZBED5Q49AG3 693 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 Q5PR19 223 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 TIMM23BQ5SRD1 257 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 ARMC4Q5T2S8 1044 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 CARD17Q5XLA6 110 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 HIST3H2AQ7L7L0 130 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 FAM122BQ7Z309 247 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 ZNF611Q8N823 705 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 POMGNT2Q8NAT1 580 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 NOXO1Q8NFA2 376 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 OR10G2Q8NGC3 310 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 OR6X1Q8NH79 312 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 ZNF519Q8TB69 540 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 LRTOMTQ8WZ04 291 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 BCL2L2Q92843 193 aaPredicted RBP7.56□□□□□ -1.2
SNCA-211ENST00000508895 HIST1H2ACQ93077 130 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 RAB3IPQ96QF0 476 aaPredicted RBP7.56□□□□□ -1.2
SNCA-211ENST00000508895 TNFRSF13CQ96RJ3 184 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 NIPSNAP1Q9BPW8 284 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 KATNB1Q9BVA0 655 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 DGCR6LQ9BY27 220 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 PLA2G12AQ9BZM1 189 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 LINC00470Q9BZP3 86 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 TXNIPQ9H3M7 391 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 YY1AP1Q9H869 796 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 NOX3Q9HBY0 568 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 INIPQ9NRY2 104 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 PARPBPQ9NWS1 579 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 TAS2R16Q9NYV7 291 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 IL20RAQ9UHF4 553 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 GDF2Q9UK05 429 aaPredicted RBP7.56□□□□□ -1.2
SNCA-211ENST00000508895 ADAM18Q9Y3Q7 739 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 RNF115Q9Y4L5 304 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 AP4S1Q9Y587 144 aa7.56□□□□□ -1.2
SNCA-211ENST00000508895 JMJD1CQ15652 2540 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 A0A096LPE4 126 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 A0A1W2PPZ6 126 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 A0A1W2PRG6 482 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 CIB4A0PJX0 185 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 M0R1B8 84 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 ABCD4O14678 606 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 SMPD2O60906 423 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 PTP4A3O75365 173 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 SLC43A1O75387 559 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 E2F6O75461 281 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 NDUFB2O95178 105 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 SOX14O95416 240 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 GASTP01350 101 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 CD3EP07766 207 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 FCGR1AP12314 374 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 IFNGR2P38484 337 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 DAP3P51398 398 aaKnown RBP7.55□□□□□ -1.2
SNCA-211ENST00000508895 CTXN1P60606 82 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 PRPS1P60891 318 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 MSMPQ1L6U9 139 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 MESTQ5EB52 335 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 C11orf71Q6IPW1 123 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 SHQ1Q6PI26 577 aaKnown RBP7.55□□□□□ -1.2
SNCA-211ENST00000508895 AMIGO2Q86SJ2 522 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms