RNA–Protein interactions for RNA: ENST00000508604.5

NUP54-208, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-208ENST00000508604 ANXA9O76027 345 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 CLPXO76031 633 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 DIRAS3O95661 229 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 IFNA10P01566 189 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 IFNA6P05013 189 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 ALPPP05187 535 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 GP1BAP07359 652 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 NUDT17P0C025 328 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 C8orf89P0DMQ9 161 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 ALPPL2P10696 532 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 RNH1P13489 461 aaKnown RBP1.45□□□□□ -2.18
NUP54-208ENST00000508604 NCF1P14598 390 aaPredicted RBP1.45□□□□□ -2.18
NUP54-208ENST00000508604 CYP11B1P15538 503 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 PSMC3P17980 439 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 HNF1AP20823 631 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 PTNP21246 168 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 DTYMKP23919 212 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 CMA1P23946 247 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 G0S2P27469 103 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 TEAD1P28347 426 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 LAP3P28838 519 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 PTPN4P29074 926 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 CD40LGP29965 261 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 OTX1P32242 354 aaPredicted RBP1.45□□□□□ -2.18
NUP54-208ENST00000508604 FDFT1P37268 417 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 NAMPTP43490 491 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 GPR4P46093 362 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 GNPDA1P46926 289 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 OMPP47874 163 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 CEBPDP49716 269 aaPredicted RBP1.45□□□□□ -2.18
NUP54-208ENST00000508604 RGS6P49758 472 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 SERPINH1P50454 418 aaKnown RBP1.45□□□□□ -2.18
NUP54-208ENST00000508604 METAP1P53582 386 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 OR2B6P58173 313 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 ACTR3P61158 418 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 NCALDP61601 193 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 CSNK1G2P78368 415 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 SPIBQ01892 262 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 CNTN2Q02246 1040 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 SLC34A1Q06495 639 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 NPRL3Q12980 569 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 SELENBP1Q13228 472 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 SLAQ13239 276 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 MED21Q13503 144 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 TFDP1Q14186 410 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 PIGHQ14442 188 aaPredicted RBP1.45□□□□□ -2.18
NUP54-208ENST00000508604 TRAM2Q15035 370 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 SLC5A12Q1EHB4 618 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 GOLGA7BQ2TAP0 167 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 HKDC1Q2TB90 917 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 DEFB115Q30KQ5 88 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 HNRNPA1L2Q32P51 320 aaKnown RBP1.45□□□□□ -2.18
NUP54-208ENST00000508604 ZNF528Q3MIS6 628 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 ZNF789Q5FWF6 425 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 COQ5Q5HYK3 327 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 PDZK1Q5T2W1 519 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 PIP5KL1Q5T9C9 394 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 ARMC12Q5T9G4 340 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 GPR107Q5VW38 600 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 HACD4Q5VWC8 232 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 OR5M10Q6IEU7 315 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 RPL13AP3Q6NVV1 102 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 FAM199XQ6PEV8 388 aaPredicted RBP1.45□□□□□ -2.18
NUP54-208ENST00000508604 ISLR2Q6UXK2 745 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 LRRC74BQ6ZQY2 392 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 C1orf186Q6ZWK4 172 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 ARMCX2Q7L311 632 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 PAGE2Q7Z2X7 111 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 SNX20Q7Z614 316 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 LUZP2Q86TE4 346 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 ZNF410Q86VK4 478 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 KRTAP13-1Q8IUC0 172 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 C4orf19Q8IY42 314 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 GCNT2Q8N0V5 402 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 COMMD1Q8N668 190 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 OR5H6Q8NGV6 325 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 OR2L8Q8NGY9 312 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 OR4F5Q8NH21 305 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 AENQ8WTP8 325 aaKnown RBP1.45□□□□□ -2.18
NUP54-208ENST00000508604 FAM172AQ8WUF8 416 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 C22orf15Q8WYQ4 148 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 MAFIPQ8WZ33 124 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 STMN2Q93045 179 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.45□□□□□ -2.18
NUP54-208ENST00000508604 S100PBPQ96BU1 408 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 AP2M1Q96CW1 435 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 RASD2Q96D21 266 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 SLC25A38Q96DW6 304 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 DUS3LQ96G46 650 aaKnown RBP1.45□□□□□ -2.18
NUP54-208ENST00000508604 ZNF317Q96PQ6 595 aaPredicted RBP1.45□□□□□ -2.18
NUP54-208ENST00000508604 C2orf88Q9BSF0 95 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 ST6GALNAC5Q9BVH7 336 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 ANGPTL4Q9BY76 406 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 NLNQ9BYT8 704 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 RAB33BQ9H082 229 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 TOLLIPQ9H0E2 274 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 GANQ9H2C0 597 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 CXXC4Q9H2H0 198 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 SPNS1Q9H2V7 528 aa1.45□□□□□ -2.18
NUP54-208ENST00000508604 LRRN3Q9H3W5 708 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms