RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 TEKT3Q9BXF9 490 aa2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 TMEM231Q9H6L2 316 aa2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 SYTL2Q9HCH5 934 aa2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 ZNF282Q9UDV7 671 aaPredicted RBP2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 ANK3Q12955 4377 aaKnown RBP2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 ZNF106Q9H2Y7 1883 aaKnown RBP2.9□□□□□ -1.94
TOPBP1-206ENST00000508524 IGLV4-69A0A075B6H9 119 aa2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 TRAV19A0A0A6YYK7 116 aa2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 LRRIQ4A6NIV6 560 aa2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 E7EWF7 191 aa2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 TMX2-CTNND1H3BSU7 103 aa2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 LAD1O00515 517 aa2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 SLC4A1P02730 911 aa2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 KCNE1P15382 129 aa2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 SERPINA2P20848 420 aa2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 YWHABP31946 246 aaKnown RBP2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 HERVK_113P61574 105 aa2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 MXD4Q14582 209 aaPredicted RBP2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 IMMTQ16891 758 aaKnown RBP2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 TSPO2Q5TGU0 170 aa2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 LANCL3Q6ZV70 420 aa2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 LINC01551Q86U37 167 aa2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 BBS7Q8IWZ6 715 aa2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 LINC01561Q8N1V8 128 aa2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 MINDY2Q8NBR6 621 aa2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 SLC5A11Q8WWX8 675 aa2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 SDSLQ96GA7 329 aa2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 RNF185Q96GF1 192 aa2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 CELF6Q96J87 481 aaKnown RBP2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 ATP6V0BQ99437 205 aa2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 LXNQ9BS40 222 aa2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 BTNL2Q9UIR0 455 aa2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 PRPF19Q9UMS4 504 aaKnown RBP2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 TP53TG5Q9Y2B4 290 aa2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 PLLPQ9Y342 182 aa2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 UGT2A1Q9Y4X1 527 aa2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 TENM1Q9UKZ4 2725 aa2.9□□□□□ -1.95
TOPBP1-206ENST00000508524 SVEP1Q4LDE5 3571 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 ABCA4P78363 2273 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 A0A1B0GWB2 263 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 ARHGAP42A6NI28 874 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 LGALS8O00214 317 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 DUX1O43812 170 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 KERAO60938 352 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 ZNF780AO75290 641 aaPredicted RBP2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 SNAPINO95295 136 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 CISD3P0C7P0 127 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 SFTPCP11686 197 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 CYP2F1P24903 491 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 PRDX3P30048 256 aaKnown RBP2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 SCN1AP35498 2009 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 CSNK1G2P78368 415 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 ZBTB6Q15916 424 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 TIGITQ495A1 244 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 CASC10Q5T4H9 136 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 TMEM215Q68D42 235 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 OR6B2Q6IFH4 312 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 GUSBP11Q6P575 273 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 VRK2Q86Y07 508 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 SAXO1Q8IYX7 474 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 SENP8Q96LD8 212 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 CCDC43Q96MW1 224 aaKnown RBP2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 PKMYT1Q99640 499 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 LZTS2Q9BRK4 669 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 NUP58Q9BVL2 599 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 ATG10Q9H0Y0 220 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 LPAR2Q9HBW0 351 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 B3GNT2Q9NY97 397 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 DEC1Q9P2X7 70 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 SCN8AQ9UQD0 1980 aa2.89□□□□□ -1.95
TOPBP1-206ENST00000508524 SONP18583 2426 aaKnown RBP2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 CFAP73A6NFT4 308 aa2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 FAM74A7A6NL05 159 aa2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 PP2D1A8MPX8 630 aa2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 KRTAP4-16G5E9R7 235 aaPredicted RBP2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 HIP1O00291 1037 aa2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 NBR2O15453 112 aa2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 RIPK2O43353 540 aa2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 CACNG3O60359 315 aa2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 NEBLO76041 1014 aa2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 SLITRK3O94933 977 aa2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 CSF2P04141 144 aa2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 HBQ1P09105 142 aa2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 CXCL8P10145 99 aa2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 UQCRBP14927 111 aa2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 ZNF823P16415 610 aa2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 CSNK1DP48730 415 aa2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 TUFMP49411 452 aaKnown RBP2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 C21orf59P57076 290 aa2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 SLC7A9P82251 487 aa2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 RGS1Q08116 209 aa2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 NCBP1Q09161 790 aaKnown RBP2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 PPP2R5CQ13362 524 aa2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 MADCAM1Q13477 382 aa2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 FAM74A3Q4VXF1 159 aa2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 TOR1AIP1Q5JTV8 583 aa2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 C1QTNF12Q5T7M4 302 aa2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 ACP7Q6ZNF0 438 aa2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 ARCQ7LC44 396 aa2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 RNF148Q8N7C7 305 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms