RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 CECR9P0C854 216 aa13.1□□□□□ -0.31
TRIO-211ENST00000508343 CD79AP11912 226 aa13.1□□□□□ -0.31
TRIO-211ENST00000508343 GPR4P46093 362 aa13.1□□□□□ -0.31
TRIO-211ENST00000508343 FABP6P51161 128 aa13.1□□□□□ -0.31
TRIO-211ENST00000508343 CTXN1P60606 82 aa13.1□□□□□ -0.31
TRIO-211ENST00000508343 NAAAQ02083 359 aa13.1□□□□□ -0.31
TRIO-211ENST00000508343 FHL1Q13642 323 aa13.1□□□□□ -0.31
TRIO-211ENST00000508343 ZBED5Q49AG3 693 aa13.1□□□□□ -0.31
TRIO-211ENST00000508343 FGD3Q5JSP0 725 aa13.1□□□□□ -0.31
TRIO-211ENST00000508343 ZNF544Q6NX49 715 aa13.1□□□□□ -0.31
TRIO-211ENST00000508343 YTHDF3Q7Z739 585 aaKnown RBP13.1□□□□□ -0.31
TRIO-211ENST00000508343 FBXL14Q8N1E6 418 aa13.1□□□□□ -0.31
TRIO-211ENST00000508343 MUC15Q8N387 334 aa13.1□□□□□ -0.31
TRIO-211ENST00000508343 SLC22A24Q8N4F4 322 aa13.1□□□□□ -0.31
TRIO-211ENST00000508343 LRRC75AQ8NAA5 344 aa13.1□□□□□ -0.31
TRIO-211ENST00000508343 SYT14Q8NB59 555 aa13.1□□□□□ -0.31
TRIO-211ENST00000508343 NOXO1Q8NFA2 376 aa13.1□□□□□ -0.31
TRIO-211ENST00000508343 IL17RDQ8NFM7 739 aa13.1□□□□□ -0.31
TRIO-211ENST00000508343 OR13C2Q8NGS9 318 aa13.1□□□□□ -0.31
TRIO-211ENST00000508343 OR52J3Q8NH60 311 aa13.1□□□□□ -0.31
TRIO-211ENST00000508343 NANOS1Q8WY41 292 aaKnown RBP13.1□□□□□ -0.31
TRIO-211ENST00000508343 TRMT61AQ96FX7 289 aaKnown RBP13.1□□□□□ -0.31
TRIO-211ENST00000508343 ZNF347Q96SE7 839 aa13.1□□□□□ -0.31
TRIO-211ENST00000508343 C1orf21Q9H246 121 aa13.1□□□□□ -0.31
TRIO-211ENST00000508343 DENND2DQ9H6A0 471 aaPredicted RBP13.1□□□□□ -0.31
TRIO-211ENST00000508343 IL1RAPQ9NPH3 570 aa13.1□□□□□ -0.31
TRIO-211ENST00000508343 ZNF346Q9UL40 294 aaKnown RBP13.1□□□□□ -0.31
TRIO-211ENST00000508343 ACANP16112 2415 aa13.09□□□□□ -0.31
TRIO-211ENST00000508343 TRBV4-1A0A0J9YWV2 114 aa13.09□□□□□ -0.31
TRIO-211ENST00000508343 IGHMP01871 453 aa13.09□□□□□ -0.31
TRIO-211ENST00000508343 FABP3P05413 133 aa13.09□□□□□ -0.31
TRIO-211ENST00000508343 OR8G3PP0DMU2 310 aa13.09□□□□□ -0.31
TRIO-211ENST00000508343 APOBEC3AP31941 199 aaPredicted RBP13.09□□□□□ -0.31
TRIO-211ENST00000508343 ZNF84P51523 738 aa13.09□□□□□ -0.31
TRIO-211ENST00000508343 ZNF133P52736 654 aaPredicted RBP13.09□□□□□ -0.31
TRIO-211ENST00000508343 ATP5J2P56134 94 aa13.09□□□□□ -0.31
TRIO-211ENST00000508343 RPL27P61353 136 aaKnown RBP13.09□□□□□ -0.31
TRIO-211ENST00000508343 PIGFQ07326 219 aa13.09□□□□□ -0.31
TRIO-211ENST00000508343 TRIM25Q14258 630 aaKnown RBP13.09□□□□□ -0.31
TRIO-211ENST00000508343 GSG1Q2KHT4 349 aa13.09□□□□□ -0.31
TRIO-211ENST00000508343 MTX3Q5HYI7 312 aa13.09□□□□□ -0.31
TRIO-211ENST00000508343 CYP2R1Q6VVX0 501 aa13.09□□□□□ -0.31
TRIO-211ENST00000508343 TRPM8Q7Z2W7 1104 aa13.09□□□□□ -0.31
TRIO-211ENST00000508343 OR4K5Q8NGD3 323 aa13.09□□□□□ -0.31
TRIO-211ENST00000508343 HDAC2Q92769 488 aaKnown RBP13.09□□□□□ -0.31
TRIO-211ENST00000508343 FAM46AQ96IP4 442 aaKnown RBP13.09□□□□□ -0.31
TRIO-211ENST00000508343 MUC13Q9H3R2 512 aa13.09□□□□□ -0.31
TRIO-211ENST00000508343 SEC61A2Q9H9S3 476 aa13.09□□□□□ -0.31
TRIO-211ENST00000508343 CBLN4Q9NTU7 201 aa13.09□□□□□ -0.31
TRIO-211ENST00000508343 TMEM38BQ9NVV0 291 aa13.09□□□□□ -0.31
TRIO-211ENST00000508343 TAS2R1Q9NYW7 299 aa13.09□□□□□ -0.31
TRIO-211ENST00000508343 PRPF19Q9UMS4 504 aaKnown RBP13.09□□□□□ -0.31
TRIO-211ENST00000508343 FLNAP21333 2647 aaKnown RBP13.09□□□□□ -0.31
TRIO-211ENST00000508343 PTP4A3O75365 173 aa13.08□□□□□ -0.32
TRIO-211ENST00000508343 UBL3O95164 117 aa13.08□□□□□ -0.32
TRIO-211ENST00000508343 GADD45GO95257 159 aa13.08□□□□□ -0.32
TRIO-211ENST00000508343 FARS2O95363 451 aaKnown RBP13.08□□□□□ -0.32
TRIO-211ENST00000508343 CELA3BP08861 270 aa13.08□□□□□ -0.32
TRIO-211ENST00000508343 NR2C1P13056 603 aa13.08□□□□□ -0.32
TRIO-211ENST00000508343 FOSL1P15407 271 aa13.08□□□□□ -0.32
TRIO-211ENST00000508343 CALCRP30988 508 aa13.08□□□□□ -0.32
TRIO-211ENST00000508343 ACVR1BP36896 505 aa13.08□□□□□ -0.32
TRIO-211ENST00000508343 CDKN1AP38936 164 aa13.08□□□□□ -0.32
TRIO-211ENST00000508343 OMPP47874 163 aa13.08□□□□□ -0.32
TRIO-211ENST00000508343 IDH3GP51553 393 aaPredicted RBP13.08□□□□□ -0.32
TRIO-211ENST00000508343 RAB1AP62820 205 aa13.08□□□□□ -0.32
TRIO-211ENST00000508343 MYBPC1Q00872 1141 aa13.08□□□□□ -0.32
TRIO-211ENST00000508343 NPRL3Q12980 569 aa13.08□□□□□ -0.32
TRIO-211ENST00000508343 TOP3AQ13472 1001 aaPredicted RBP13.08□□□□□ -0.32
TRIO-211ENST00000508343 SEC23BQ15437 767 aa13.08□□□□□ -0.32
TRIO-211ENST00000508343 NRN1LQ496H8 165 aa13.08□□□□□ -0.32
TRIO-211ENST00000508343 C10orf128Q5T292 105 aa13.08□□□□□ -0.32
TRIO-211ENST00000508343 FAM205BPQ63HN1 556 aa13.08□□□□□ -0.32
TRIO-211ENST00000508343 IGFN1Q86VF2 1251 aa13.08□□□□□ -0.32
TRIO-211ENST00000508343 ZDHHC21Q8IVQ6 265 aa13.08□□□□□ -0.32
TRIO-211ENST00000508343 SKA3Q8IX90 412 aa13.08□□□□□ -0.32
TRIO-211ENST00000508343 OR4F15Q8NGB8 312 aa13.08□□□□□ -0.32
TRIO-211ENST00000508343 NMD3Q96D46 503 aaKnown RBP13.08□□□□□ -0.32
TRIO-211ENST00000508343 RBP7Q96R05 134 aa13.08□□□□□ -0.32
TRIO-211ENST00000508343 KCNK17Q96T54 332 aa13.08□□□□□ -0.32
TRIO-211ENST00000508343 FUZQ9BT04 418 aa13.08□□□□□ -0.32
TRIO-211ENST00000508343 ALG12Q9BV10 488 aa13.08□□□□□ -0.32
TRIO-211ENST00000508343 NDEL1Q9GZM8 345 aa13.08□□□□□ -0.32
TRIO-211ENST00000508343 SMURF2Q9HAU4 748 aa13.08□□□□□ -0.32
TRIO-211ENST00000508343 KRCC1Q9NPI7 259 aaPredicted RBP13.08□□□□□ -0.32
TRIO-211ENST00000508343 ZNF224Q9NZL3 707 aa13.08□□□□□ -0.32
TRIO-211ENST00000508343 SH3PXD2BA1X283 911 aa13.07□□□□□ -0.32
TRIO-211ENST00000508343 A6NIZ1 184 aa13.07□□□□□ -0.32
TRIO-211ENST00000508343 MGRN1O60291 552 aa13.07□□□□□ -0.32
TRIO-211ENST00000508343 CD14P08571 375 aa13.07□□□□□ -0.32
TRIO-211ENST00000508343 ATP6V1B2P21281 511 aa13.07□□□□□ -0.32
TRIO-211ENST00000508343 RPL4P36578 427 aaKnown RBP13.07□□□□□ -0.32
TRIO-211ENST00000508343 LIMS1P48059 325 aa13.07□□□□□ -0.32
TRIO-211ENST00000508343 GIPRP48546 466 aa13.07□□□□□ -0.32
TRIO-211ENST00000508343 PTDSS1P48651 473 aaKnown RBP13.07□□□□□ -0.32
TRIO-211ENST00000508343 RAP1BP61224 184 aa13.07□□□□□ -0.32
TRIO-211ENST00000508343 RAP1AP62834 184 aa13.07□□□□□ -0.32
TRIO-211ENST00000508343 MS4A2Q01362 244 aa13.07□□□□□ -0.32
TRIO-211ENST00000508343 SPIBQ01892 262 aa13.07□□□□□ -0.32
TRIO-211ENST00000508343 CD47Q08722 323 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms