RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 RUNX1T1Q06455 604 aa11.18□□□□□ -0.62
HMGCS1-205ENST00000508319 TRIP10Q15642 601 aa11.18□□□□□ -0.62
HMGCS1-205ENST00000508319 HIST3H3Q16695 136 aa11.18□□□□□ -0.62
HMGCS1-205ENST00000508319 KRTAP24-1Q3LI83 254 aa11.18□□□□□ -0.62
HMGCS1-205ENST00000508319 NANOGP8Q6NSW7 305 aa11.18□□□□□ -0.62
HMGCS1-205ENST00000508319 NANOGNBQ7Z5D8 188 aa11.18□□□□□ -0.62
HMGCS1-205ENST00000508319 LRP11Q86VZ4 500 aa11.18□□□□□ -0.62
HMGCS1-205ENST00000508319 SLC26A7Q8TE54 656 aa11.18□□□□□ -0.62
HMGCS1-205ENST00000508319 SNX18Q96RF0 628 aa11.18□□□□□ -0.62
HMGCS1-205ENST00000508319 NANOGQ9H9S0 305 aa11.18□□□□□ -0.62
HMGCS1-205ENST00000508319 SPEF1Q9Y4P9 236 aa11.18□□□□□ -0.62
HMGCS1-205ENST00000508319 MT-ND1P03886 318 aa11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 UMPSP11172 480 aa11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 TNFRSF1BP20333 461 aa11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 APEX1P27695 318 aaKnown RBP11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 ALDH3B1P43353 468 aa11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 UGT2B15P54855 530 aa11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 RPS23P62266 143 aaKnown RBP11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 GALK2Q01415 458 aa11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 RPL18Q07020 188 aaKnown RBP11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 CYLC2Q14093 348 aaPredicted RBP11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 MAD2L1BPQ15013 274 aaPredicted RBP11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 COQ5Q5HYK3 327 aa11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 ELFN2Q5R3F8 820 aa11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 GKAP1Q5VSY0 366 aaPredicted RBP11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 REP15Q6BDI9 236 aa11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 CARM1Q86X55 608 aa11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 NKAIN4Q8IVV8 208 aa11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 PAQR4Q8N4S7 273 aaPredicted RBP11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 NOXO1Q8NFA2 376 aa11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 OR8J3Q8NGG0 315 aa11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 PFN4Q8NHR9 129 aa11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 ASB10Q8WXI3 467 aa11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 HPS1Q92902 700 aa11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 LRRC58Q96CX6 371 aa11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 ZNF347Q96SE7 839 aa11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 SEPHS2Q99611 448 aa11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 SH3GL3Q99963 347 aa11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 MRPL13Q9BYD1 178 aaKnown RBP11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 C20orf141Q9NUB4 165 aa11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 SLC7A8Q9UHI5 535 aa11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 FZR1Q9UM11 496 aa11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 SH3GLB1Q9Y371 365 aa11.17□□□□□ -0.62
HMGCS1-205ENST00000508319 BLOC1S5-TXNDC5H3BN57 136 aa11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 MRASO14807 208 aa11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 SHOX2O60902 331 aaPredicted RBP11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 ENTPD5O75356 428 aa11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 NCR1O76036 304 aa11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 OR5F1O95221 314 aa11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 BCL10O95999 233 aa11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 IGF2P01344 180 aa11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 IGHG1P01857 330 aa11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 HPXP02790 462 aa11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 HIST1H2ABP04908 130 aa11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 F13BP05160 661 aa11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 QDPRP09417 244 aa11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 HNF1AP20823 631 aa11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 RBM34P42696 430 aaKnown RBP11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 SEC24CP53992 1094 aa11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 TAS2R41P59536 307 aa11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 SRSF2Q01130 221 aaKnown RBP11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 CR1LQ2VPA4 569 aa11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 NRN1LQ496H8 165 aa11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 CGB2Q6NT52 195 aa11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 DEF8Q6ZN54 512 aa11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 HIST3H2AQ7L7L0 130 aa11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 SLC30A7Q8NEW0 376 aa11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 OR4K5Q8NGD3 323 aa11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 TMEM255BQ8WV15 326 aa11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 HIST1H2ACQ93077 130 aa11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 C1orf159Q96HA4 380 aa11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 SH3GL1Q99961 368 aa11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 POLR2J2Q9GZM3 115 aaKnown RBP11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 POLR2J3Q9H1A7 115 aaKnown RBP11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 MS4A5Q9H3V2 200 aa11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 REV1Q9UBZ9 1251 aa11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 BAG5Q9UL15 447 aa11.16□□□□□ -0.62
HMGCS1-205ENST00000508319 NBEAL1Q6ZS30 2694 aa11.15□□□□□ -0.62
HMGCS1-205ENST00000508319 A0A1W2PRG6 482 aa11.15□□□□□ -0.62
HMGCS1-205ENST00000508319 OR7A10O76100 309 aa11.15□□□□□ -0.62
HMGCS1-205ENST00000508319 FARS2O95363 451 aaKnown RBP11.15□□□□□ -0.62
HMGCS1-205ENST00000508319 SNAP29O95721 258 aa11.15□□□□□ -0.62
HMGCS1-205ENST00000508319 TSPAN19P0C672 248 aa11.15□□□□□ -0.62
HMGCS1-205ENST00000508319 FAM157BP0CG42 384 aa11.15□□□□□ -0.62
HMGCS1-205ENST00000508319 CCL2P13500 99 aa11.15□□□□□ -0.62
HMGCS1-205ENST00000508319 TCN1P20061 433 aaPredicted RBP11.15□□□□□ -0.62
HMGCS1-205ENST00000508319 LSP1P33241 339 aa11.15□□□□□ -0.62
HMGCS1-205ENST00000508319 AQP2P41181 271 aa11.15□□□□□ -0.62
HMGCS1-205ENST00000508319 ZNF133P52736 654 aaPredicted RBP11.15□□□□□ -0.62
HMGCS1-205ENST00000508319 CDH15P55291 814 aa11.15□□□□□ -0.62
HMGCS1-205ENST00000508319 CLRN1P58418 232 aa11.15□□□□□ -0.62
HMGCS1-205ENST00000508319 MYBPC1Q00872 1141 aa11.15□□□□□ -0.62
HMGCS1-205ENST00000508319 KLF10Q13118 480 aa11.15□□□□□ -0.62
HMGCS1-205ENST00000508319 PIN1Q13526 163 aaPredicted RBP11.15□□□□□ -0.62
HMGCS1-205ENST00000508319 CCNIQ14094 377 aa11.15□□□□□ -0.62
HMGCS1-205ENST00000508319 ERICH5Q6P6B1 374 aa11.15□□□□□ -0.62
HMGCS1-205ENST00000508319 LINC01356Q8N9X3 169 aa11.15□□□□□ -0.62
HMGCS1-205ENST00000508319 SYT14Q8NB59 555 aa11.15□□□□□ -0.62
HMGCS1-205ENST00000508319 TMEM239Q8WW34 195 aa11.15□□□□□ -0.62
HMGCS1-205ENST00000508319 MCHR2Q969V1 340 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms