RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 PIWIL3Q7Z3Z3 882 aaKnown RBP12.31□□□□□ -0.44
RAB28-205ENST00000508274 SLC22A24Q8N4F4 322 aa12.31□□□□□ -0.44
RAB28-205ENST00000508274 NOXO1Q8NFA2 376 aa12.31□□□□□ -0.44
RAB28-205ENST00000508274 MOSPD2Q8NHP6 518 aa12.31□□□□□ -0.44
RAB28-205ENST00000508274 ASB10Q8WXI3 467 aa12.31□□□□□ -0.44
RAB28-205ENST00000508274 SGTBQ96EQ0 304 aa12.31□□□□□ -0.44
RAB28-205ENST00000508274 MRPL37Q9BZE1 423 aaKnown RBP12.31□□□□□ -0.44
RAB28-205ENST00000508274 BPESC1Q9GZL8 116 aa12.31□□□□□ -0.44
RAB28-205ENST00000508274 TPK1Q9H3S4 243 aa12.31□□□□□ -0.44
RAB28-205ENST00000508274 FZR1Q9UM11 496 aa12.31□□□□□ -0.44
RAB28-205ENST00000508274 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.31□□□□□ -0.44
RAB28-205ENST00000508274 LOC390937A0A1W2PQ73 354 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 ELOVL7A1L3X0 281 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 IFNA14P01570 189 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 IGHG1P01857 330 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 YAP1P46937 504 aaKnown RBP12.3□□□□□ -0.44
RAB28-205ENST00000508274 CLRN1P58418 232 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 HIST3H3Q16695 136 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 VTCN1Q7Z7D3 282 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 SYT14Q8NB59 555 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 OR4K5Q8NGD3 323 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 MCHR2Q969V1 340 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 MRPL24Q96A35 216 aaKnown RBP12.3□□□□□ -0.44
RAB28-205ENST00000508274 POLR2J2Q9GZM3 115 aaKnown RBP12.3□□□□□ -0.44
RAB28-205ENST00000508274 RAB1BQ9H0U4 201 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 POLR2J3Q9H1A7 115 aaKnown RBP12.3□□□□□ -0.44
RAB28-205ENST00000508274 DYNLRB1Q9NP97 96 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 INIPQ9NRY2 104 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 A4GNTQ9UNA3 340 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 CMAHPQ9Y471 501 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 SNX13Q9Y5W8 968 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 COL6A5A8TX70 2615 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 MCIDASD6RGH6 385 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 J3KTA2 159 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 NDUFS8O00217 210 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 SLC22A2O15244 555 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 TRMUO75648 421 aaKnown RBP12.3□□□□□ -0.44
RAB28-205ENST00000508274 ADRA2AP08913 450 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 OR8G3PP0DMU2 310 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 MDH1P40925 334 aaKnown RBP12.3□□□□□ -0.44
RAB28-205ENST00000508274 SELENOWP63302 87 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 LAPTM4AQ15012 233 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 LRP11Q86VZ4 500 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 MEX3DQ86XN8 651 aaKnown RBP12.3□□□□□ -0.44
RAB28-205ENST00000508274 SLC15A3Q8IY34 581 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 PAQR4Q8N4S7 273 aaPredicted RBP12.3□□□□□ -0.44
RAB28-205ENST00000508274 PRRC1Q96M27 445 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 SEPHS2Q99611 448 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 SYT3Q9BQG1 590 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 MRPL13Q9BYD1 178 aaKnown RBP12.3□□□□□ -0.44
RAB28-205ENST00000508274 MYEF2Q9P2K5 600 aaKnown RBP12.3□□□□□ -0.44
RAB28-205ENST00000508274 RHCGQ9UBD6 479 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 MED31Q9Y3C7 131 aa12.3□□□□□ -0.44
RAB28-205ENST00000508274 MXRA5Q9NR99 2828 aa12.29□□□□□ -0.44
RAB28-205ENST00000508274 IGKV1D-43A0A0B4J1Z2 117 aa12.29□□□□□ -0.44
RAB28-205ENST00000508274 A0A1W2PRG6 482 aa12.29□□□□□ -0.44
RAB28-205ENST00000508274 VSTM5A8MXK1 200 aa12.29□□□□□ -0.44
RAB28-205ENST00000508274 SLC2A10O95528 541 aa12.29□□□□□ -0.44
RAB28-205ENST00000508274 SERPINA5P05154 406 aa12.29□□□□□ -0.44
RAB28-205ENST00000508274 TSPAN19P0C672 248 aa12.29□□□□□ -0.44
RAB28-205ENST00000508274 COX4I1P13073 169 aa12.29□□□□□ -0.44
RAB28-205ENST00000508274 CCL2P13500 99 aa12.29□□□□□ -0.44
RAB28-205ENST00000508274 DAOP14920 347 aa12.29□□□□□ -0.44
RAB28-205ENST00000508274 ACADSP16219 412 aa12.29□□□□□ -0.44
RAB28-205ENST00000508274 GLRXP35754 106 aa12.29□□□□□ -0.44
RAB28-205ENST00000508274 FXNQ16595 210 aa12.29□□□□□ -0.44
RAB28-205ENST00000508274 CHRFAM7AQ494W8 412 aa12.29□□□□□ -0.44
RAB28-205ENST00000508274 IQCCQ4KMZ1 466 aa12.29□□□□□ -0.44
RAB28-205ENST00000508274 HSP90B2PQ58FF3 399 aa12.29□□□□□ -0.44
RAB28-205ENST00000508274 GKAP1Q5VSY0 366 aaPredicted RBP12.29□□□□□ -0.44
RAB28-205ENST00000508274 CYB5R2Q6BCY4 276 aa12.29□□□□□ -0.44
RAB28-205ENST00000508274 TREML1Q86YW5 311 aa12.29□□□□□ -0.44
RAB28-205ENST00000508274 RP9Q8TA86 221 aaKnown RBP12.29□□□□□ -0.44
RAB28-205ENST00000508274 LIPHQ8WWY8 451 aa12.29□□□□□ -0.44
RAB28-205ENST00000508274 KCNK17Q96T54 332 aa12.29□□□□□ -0.44
RAB28-205ENST00000508274 SOX7Q9BT81 388 aa12.29□□□□□ -0.44
RAB28-205ENST00000508274 DENND2DQ9H6A0 471 aaPredicted RBP12.29□□□□□ -0.44
RAB28-205ENST00000508274 MYOZ1Q9NP98 299 aaPredicted RBP12.29□□□□□ -0.44
RAB28-205ENST00000508274 MAN2C1Q9NTJ4 1040 aa12.29□□□□□ -0.44
RAB28-205ENST00000508274 LYNX1G3V0Z9 82 aa12.28□□□□□ -0.44
RAB28-205ENST00000508274 NME4O00746 187 aa12.28□□□□□ -0.44
RAB28-205ENST00000508274 STAMBPO95630 424 aa12.28□□□□□ -0.44
RAB28-205ENST00000508274 IGF2P01344 180 aa12.28□□□□□ -0.44
RAB28-205ENST00000508274 LYNX1P0DP58 116 aa12.28□□□□□ -0.44
RAB28-205ENST00000508274 THRBP10828 461 aa12.28□□□□□ -0.44
RAB28-205ENST00000508274 APEHP13798 732 aaKnown RBP12.28□□□□□ -0.44
RAB28-205ENST00000508274 CDAP32320 146 aa12.28□□□□□ -0.44
RAB28-205ENST00000508274 ALDH3B1P43353 468 aa12.28□□□□□ -0.44
RAB28-205ENST00000508274 SLC7A2P52569 658 aa12.28□□□□□ -0.44
RAB28-205ENST00000508274 GALK2Q01415 458 aa12.28□□□□□ -0.44
RAB28-205ENST00000508274 LIPEQ05469 1076 aa12.28□□□□□ -0.44
RAB28-205ENST00000508274 FMODQ06828 376 aa12.28□□□□□ -0.44
RAB28-205ENST00000508274 ST3GAL3Q11203 375 aa12.28□□□□□ -0.44
RAB28-205ENST00000508274 MAD2L1BPQ15013 274 aaPredicted RBP12.28□□□□□ -0.44
RAB28-205ENST00000508274 ARMC4Q5T2S8 1044 aa12.28□□□□□ -0.44
RAB28-205ENST00000508274 ARPINQ7Z6K5 226 aa12.28□□□□□ -0.44
RAB28-205ENST00000508274 LRRC18Q8N456 261 aa12.28□□□□□ -0.44
RAB28-205ENST00000508274 ARIH2OSQ8N7S6 290 aa12.28□□□□□ -0.44
RAB28-205ENST00000508274 NEU4Q8WWR8 484 aaPredicted RBP12.28□□□□□ -0.44
RAB28-205ENST00000508274 HDAC2Q92769 488 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms