RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 NANOGNBQ7Z5D8 188 aa9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 PATL1Q86TB9 770 aaKnown RBP9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 GLCCI1Q86VQ1 547 aa9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 CARM1Q86X55 608 aa9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 SLC30A8Q8IWU4 369 aa9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 PAQR4Q8N4S7 273 aaPredicted RBP9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 RFLNBQ8N5W9 214 aa9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 SLC30A7Q8NEW0 376 aa9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 CLDND2Q8NHS1 167 aa9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 SLC26A7Q8TE54 656 aa9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 STON2Q8WXE9 905 aa9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 RDH5Q92781 318 aa9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 YIPF5Q969M3 257 aa9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 SLC25A44Q96H78 314 aaPredicted RBP9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 MPP4Q96JB8 637 aa9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 SH3GL3Q99963 347 aa9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 ZNF426Q9BUY5 554 aa9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 OR51B6Q9H340 312 aa9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 KAT8Q9H7Z6 458 aaKnown RBP9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 INTS9Q9NV88 658 aaKnown RBP9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 ZNF229Q9UJW7 825 aa9.9□□□□□ -0.82
HMGCS1-204ENST00000507293 B4DSR2 109 aa9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 FAM157AC9JC47 383 aa9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 TCF21O43680 179 aa9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 ENTPD5O75356 428 aa9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 FARS2O95363 451 aaKnown RBP9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 BCL10O95999 233 aa9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 HIST1H2ABP04908 130 aa9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 QDPRP09417 244 aa9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 SAGP10523 405 aaPredicted RBP9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 CCL2P13500 99 aa9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 ITGA2P17301 1181 aa9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 PCMT1P22061 227 aa9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 CRYBA2P53672 197 aa9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 CLRN1P58418 232 aa9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 NKPD1Q17RQ9 610 aa9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 RGS7BPQ6MZT1 257 aaPredicted RBP9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 TMEM53Q6P2H8 277 aa9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 HIST3H2AQ7L7L0 130 aa9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 NOXO1Q8NFA2 376 aa9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 OR4K5Q8NGD3 323 aa9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 OR10A6Q8NH74 314 aa9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 HIST1H2ACQ93077 130 aa9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 PRSS27Q9BQR3 290 aa9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 SLC19A3Q9BZV2 496 aa9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 PCDHAC1Q9H158 963 aa9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 RNF121Q9H920 327 aa9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 CDH20Q9HBT6 801 aa9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 LPAR2Q9HBW0 351 aa9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 MEPEQ9NQ76 525 aaPredicted RBP9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 ZNF275Q9NSD4 429 aaPredicted RBP9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 ZNF346Q9UL40 294 aaKnown RBP9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 TRIM33Q9UPN9 1127 aa9.89□□□□□ -0.83
HMGCS1-204ENST00000507293 SLC22A23A1A5C7 686 aa9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 WNT9BO14905 357 aa9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 PPIHO43447 177 aaKnown RBP9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 RP2O75695 350 aa9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 CLPTM1O96005 669 aa9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 IGHG1P01857 330 aa9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 TFP02787 698 aa9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 F13BP05160 661 aa9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 MAGEB1P43366 347 aa9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 GZMMP51124 257 aa9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 ERVS71-1P61550 626 aa9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 MYBPC1Q00872 1141 aa9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 RUNX1T1Q06455 604 aa9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 RPL18Q07020 188 aaKnown RBP9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 VMACQ2NL98 169 aa9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 SLC36A2Q495M3 483 aa9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 INTS11Q5TA45 600 aaKnown RBP9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 SLC16A14Q7RTX9 510 aa9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 DPPA2Q7Z7J5 298 aa9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 RBM15BQ8NDT2 890 aaKnown RBP9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 TSPEARQ8WU66 669 aa9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 MCHR2Q969V1 340 aa9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 MAGEB18Q96M61 343 aa9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 TSPAN32Q96QS1 320 aa9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 ZNF347Q96SE7 839 aa9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 ZNF416Q9BWM5 594 aa9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 RACGAP1Q9H0H5 632 aa9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 NPHS2Q9NP85 383 aa9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 TREM2Q9NZC2 230 aa9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 TAAR3PQ9P1P4 343 aa9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 TANC2Q9HCD6 1990 aa9.88□□□□□ -0.83
HMGCS1-204ENST00000507293 A0A1W2PRG6 482 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 C17orf100A8MU93 164 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 MCIDASD6RGH6 385 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 BLOC1S5-TXNDC5H3BN57 136 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 OR7A10O76100 309 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 LCKP06239 509 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 MSMBP08118 114 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 VIMP08670 466 aaKnown RBP9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 GAAP10253 952 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 TNFRSF1BP20333 461 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 ZNF84P51523 738 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 UGT2B15P54855 530 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 KLF3P57682 345 aaPredicted RBP9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 MRPS11P82912 194 aaKnown RBP9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 HIST3H3Q16695 136 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 TBC1D28Q2M2D7 210 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms