RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 FJX1Q86VR8 437 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 CPOQ8IVL8 374 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 C20orf196Q8IYI0 205 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 C8orf59Q8N0T1 100 aaPredicted RBP12.54□□□□□ -0.4
RNF4-208ENST00000507247 DEPDC4Q8N2C3 294 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 BBS1Q8NFJ9 593 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 OR9Q1Q8NGQ5 310 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 OR6K3Q8NGY3 331 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 APH1AQ96BI3 265 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 STARD4Q96DR4 205 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 TSSK2Q96PF2 358 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 APOL4Q9BPW4 351 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 NMNAT2Q9BZQ4 307 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 RPRD1BQ9NQG5 326 aaKnown RBP12.54□□□□□ -0.4
RNF4-208ENST00000507247 RASSF1Q9NS23 344 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 SLC7A10Q9NS82 523 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 GLTPQ9NZD2 209 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 PRSS50Q9UI38 385 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 CENPBD1B2RD01 187 aa12.53□□□□□ -0.4
RNF4-208ENST00000507247 M0R3G1 203 aa12.53□□□□□ -0.4
RNF4-208ENST00000507247 RENP00797 406 aa12.53□□□□□ -0.4
RNF4-208ENST00000507247 CGAP01215 116 aa12.53□□□□□ -0.4
RNF4-208ENST00000507247 CLUP10909 449 aa12.53□□□□□ -0.4
RNF4-208ENST00000507247 CTLA4P16410 223 aa12.53□□□□□ -0.4
RNF4-208ENST00000507247 MYF6P23409 242 aa12.53□□□□□ -0.4
RNF4-208ENST00000507247 CTSSP25774 331 aa12.53□□□□□ -0.4
RNF4-208ENST00000507247 SNRPGP62308 76 aaKnown RBP12.53□□□□□ -0.4
RNF4-208ENST00000507247 IL5RAQ01344 420 aa12.53□□□□□ -0.4
RNF4-208ENST00000507247 MAD2L1BPQ15013 274 aaPredicted RBP12.53□□□□□ -0.4
RNF4-208ENST00000507247 ETFDHQ16134 617 aa12.53□□□□□ -0.4
RNF4-208ENST00000507247 LRFN4Q6PJG9 635 aa12.53□□□□□ -0.4
RNF4-208ENST00000507247 CXXC5Q7LFL8 322 aaKnown RBP12.53□□□□□ -0.4
RNF4-208ENST00000507247 ZNF100Q8IYN0 542 aa12.53□□□□□ -0.4
RNF4-208ENST00000507247 SETD9Q8NE22 299 aa12.53□□□□□ -0.4
RNF4-208ENST00000507247 OR8J1Q8NGP2 316 aa12.53□□□□□ -0.4
RNF4-208ENST00000507247 OR6N1Q8NGY5 312 aa12.53□□□□□ -0.4
RNF4-208ENST00000507247 RHOXF1Q8NHV9 184 aa12.53□□□□□ -0.4
RNF4-208ENST00000507247 PRR7Q8TB68 274 aa12.53□□□□□ -0.4
RNF4-208ENST00000507247 CNIH3Q8TBE1 160 aa12.53□□□□□ -0.4
RNF4-208ENST00000507247 APH1BQ8WW43 257 aa12.53□□□□□ -0.4
RNF4-208ENST00000507247 ZNRF4Q8WWF5 429 aa12.53□□□□□ -0.4
RNF4-208ENST00000507247 PTP4A1Q93096 173 aa12.53□□□□□ -0.4
RNF4-208ENST00000507247 MCHR2Q969V1 340 aa12.53□□□□□ -0.4
RNF4-208ENST00000507247 LRR1Q96L50 414 aa12.53□□□□□ -0.4
RNF4-208ENST00000507247 ALKBH3Q96Q83 286 aaPredicted RBP12.53□□□□□ -0.4
RNF4-208ENST00000507247 LINC00470Q9BZP3 86 aa12.53□□□□□ -0.4
RNF4-208ENST00000507247 NUAK2Q9H093 628 aa12.53□□□□□ -0.4
RNF4-208ENST00000507247 SLCO5A1Q9H2Y9 848 aa12.53□□□□□ -0.4
RNF4-208ENST00000507247 PARPBPQ9NWS1 579 aa12.53□□□□□ -0.4
RNF4-208ENST00000507247 DNAJC27Q9NZQ0 273 aa12.53□□□□□ -0.4
RNF4-208ENST00000507247 PCDHGB5Q9Y5G0 923 aa12.53□□□□□ -0.4
RNF4-208ENST00000507247 HSPB2A8KAH6 182 aa12.52□□□□□ -0.41
RNF4-208ENST00000507247 PRR23D1E9PI22 279 aaPredicted RBP12.52□□□□□ -0.41
RNF4-208ENST00000507247 DENRO43583 198 aaKnown RBP12.52□□□□□ -0.41
RNF4-208ENST00000507247 AHCYL1O43865 530 aa12.52□□□□□ -0.41
RNF4-208ENST00000507247 WBP4O75554 376 aaKnown RBP12.52□□□□□ -0.41
RNF4-208ENST00000507247 GYPBP06028 91 aa12.52□□□□□ -0.41
RNF4-208ENST00000507247 QDPRP09417 244 aa12.52□□□□□ -0.41
RNF4-208ENST00000507247 PRR23D2P0DMB1 279 aaPredicted RBP12.52□□□□□ -0.41
RNF4-208ENST00000507247 SLC2A5P22732 501 aa12.52□□□□□ -0.41
RNF4-208ENST00000507247 ZNF133P52736 654 aaPredicted RBP12.52□□□□□ -0.41
RNF4-208ENST00000507247 SLC25A1P53007 311 aa12.52□□□□□ -0.41
RNF4-208ENST00000507247 FOXG1P55316 489 aaPredicted RBP12.52□□□□□ -0.41
RNF4-208ENST00000507247 ADORA2A-AS1P86434 159 aa12.52□□□□□ -0.41
RNF4-208ENST00000507247 HSPB2Q16082 182 aa12.52□□□□□ -0.41
RNF4-208ENST00000507247 AADACL4Q5VUY2 407 aa12.52□□□□□ -0.41
RNF4-208ENST00000507247 LAIR2Q6ISS4 152 aa12.52□□□□□ -0.41
RNF4-208ENST00000507247 SLC25A47Q6Q0C1 308 aa12.52□□□□□ -0.41
RNF4-208ENST00000507247 THAP5Q7Z6K1 395 aa12.52□□□□□ -0.41
RNF4-208ENST00000507247 ATCAYQ86WG3 371 aa12.52□□□□□ -0.41
RNF4-208ENST00000507247 LIX1LQ8IVB5 337 aa12.52□□□□□ -0.41
RNF4-208ENST00000507247 OR6V1Q8N148 313 aa12.52□□□□□ -0.41
RNF4-208ENST00000507247 FAM26EQ8N5C1 309 aa12.52□□□□□ -0.41
RNF4-208ENST00000507247 FBLIM1Q8WUP2 373 aa12.52□□□□□ -0.41
RNF4-208ENST00000507247 TRUB1Q8WWH5 349 aaKnown RBP12.52□□□□□ -0.41
RNF4-208ENST00000507247 RND1Q92730 232 aa12.52□□□□□ -0.41
RNF4-208ENST00000507247 OTULINQ96BN8 352 aa12.52□□□□□ -0.41
RNF4-208ENST00000507247 ZNF837Q96EG3 531 aaPredicted RBP12.52□□□□□ -0.41
RNF4-208ENST00000507247 CNBD2Q96M20 576 aa12.52□□□□□ -0.41
RNF4-208ENST00000507247 SFXN3Q9BWM7 321 aa12.52□□□□□ -0.41
RNF4-208ENST00000507247 OPN3Q9H1Y3 402 aaPredicted RBP12.52□□□□□ -0.41
RNF4-208ENST00000507247 PLSCR4Q9NRQ2 329 aa12.52□□□□□ -0.41
RNF4-208ENST00000507247 ASB6Q9NWX5 421 aa12.52□□□□□ -0.41
RNF4-208ENST00000507247 LRRC42Q9Y546 428 aa12.52□□□□□ -0.41
RNF4-208ENST00000507247 HSPE1-MOB4S4R3N1 261 aa12.52□□□□□ -0.41
RNF4-208ENST00000507247 IGLV1-36A0A0B4J1U3 117 aa12.51□□□□□ -0.41
RNF4-208ENST00000507247 CCDC182A6NF36 153 aa12.51□□□□□ -0.41
RNF4-208ENST00000507247 FAM171A2A8MVW0 826 aa12.51□□□□□ -0.41
RNF4-208ENST00000507247 LRRTM2O43300 516 aa12.51□□□□□ -0.41
RNF4-208ENST00000507247 SLC16A7O60669 478 aa12.51□□□□□ -0.41
RNF4-208ENST00000507247 IL18BPO95998 194 aa12.51□□□□□ -0.41
RNF4-208ENST00000507247 SPI1P17947 270 aa12.51□□□□□ -0.41
RNF4-208ENST00000507247 PAICSP22234 425 aaKnown RBP12.51□□□□□ -0.41
RNF4-208ENST00000507247 PYCR1P32322 319 aa12.51□□□□□ -0.41
RNF4-208ENST00000507247 C4orf17Q53FE4 359 aa12.51□□□□□ -0.41
RNF4-208ENST00000507247 THEM4Q5T1C6 240 aa12.51□□□□□ -0.41
RNF4-208ENST00000507247 ZBTB46Q86UZ6 589 aa12.51□□□□□ -0.41
RNF4-208ENST00000507247 GPR137CQ8N3F9 429 aa12.51□□□□□ -0.41
RNF4-208ENST00000507247 ZNF610Q8N9Z0 462 aa12.51□□□□□ -0.41
RNF4-208ENST00000507247 POMGNT2Q8NAT1 580 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms