RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 CRISP1P54107 249 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 CLRN1P58418 232 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 ESRRGP62508 458 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 CDK5Q00535 292 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 KRR1Q13601 381 aaKnown RBP11.29□□□□□ -0.6
TCOF1-210ENST00000506767 DAG1Q14118 895 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 TSC22D1Q15714 1073 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 GABRA6Q16445 453 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 CEACAM16Q2WEN9 425 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 THEM4Q5T1C6 240 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 C10orf128Q5T292 105 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 SLC25A47Q6Q0C1 308 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 PTCHD4Q6ZW05 846 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 ZNF627Q7L945 461 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 BHLHA15Q7RTS1 189 aaPredicted RBP11.29□□□□□ -0.6
TCOF1-210ENST00000506767 ADCK1Q86TW2 530 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 SYT14Q8NB59 555 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 C1orf162Q8NEQ5 155 aaPredicted RBP11.29□□□□□ -0.6
TCOF1-210ENST00000506767 OR2T33Q8NG76 320 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 TEX47Q8TBZ9 253 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 FNDC8Q8TC99 324 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 MCHR2Q969V1 340 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 SNX18Q96RF0 628 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 DDOQ99489 341 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 SLC29A1Q99808 456 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 C9orf16Q9BUW7 83 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 ULBP2Q9BZM5 246 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 B3GAT2Q9NPZ5 323 aa11.29□□□□□ -0.6
TCOF1-210ENST00000506767 VSX1Q9NZR4 365 aaPredicted RBP11.29□□□□□ -0.6
TCOF1-210ENST00000506767 IGKV1D-43A0A0B4J1Z2 117 aa11.28□□□□□ -0.6
TCOF1-210ENST00000506767 SLC22A23A1A5C7 686 aa11.28□□□□□ -0.6
TCOF1-210ENST00000506767 SOCS2O14508 198 aa11.28□□□□□ -0.6
TCOF1-210ENST00000506767 XKRYO14609 159 aa11.28□□□□□ -0.6
TCOF1-210ENST00000506767 EI24O14681 340 aa11.28□□□□□ -0.6
TCOF1-210ENST00000506767 CASQ2O14958 399 aaPredicted RBP11.28□□□□□ -0.6
TCOF1-210ENST00000506767 DHHO43323 396 aa11.28□□□□□ -0.6
TCOF1-210ENST00000506767 NR2C1P13056 603 aa11.28□□□□□ -0.6
TCOF1-210ENST00000506767 IGFBP5P24593 272 aa11.28□□□□□ -0.6
TCOF1-210ENST00000506767 ALDH3A2P51648 485 aa11.28□□□□□ -0.6
TCOF1-210ENST00000506767 SH3BGRP55822 239 aaPredicted RBP11.28□□□□□ -0.6
TCOF1-210ENST00000506767 MYBPC1Q00872 1141 aa11.28□□□□□ -0.6
TCOF1-210ENST00000506767 TGFBR3Q03167 851 aa11.28□□□□□ -0.6
TCOF1-210ENST00000506767 GINS1Q14691 196 aa11.28□□□□□ -0.6
TCOF1-210ENST00000506767 PGGHGQ32M88 737 aa11.28□□□□□ -0.6
TCOF1-210ENST00000506767 C9orf135Q5VTT2 229 aa11.28□□□□□ -0.6
TCOF1-210ENST00000506767 OR7E24Q6IFN5 339 aa11.28□□□□□ -0.6
TCOF1-210ENST00000506767 ACSM5Q6NUN0 579 aa11.28□□□□□ -0.6
TCOF1-210ENST00000506767 SLC27A4Q6P1M0 643 aa11.28□□□□□ -0.6
TCOF1-210ENST00000506767 C22orf34Q6ZV56 151 aa11.28□□□□□ -0.6
TCOF1-210ENST00000506767 DMRTC2Q8IXT2 367 aaPredicted RBP11.28□□□□□ -0.6
TCOF1-210ENST00000506767 CBR4Q8N4T8 237 aa11.28□□□□□ -0.6
TCOF1-210ENST00000506767 STEAP2Q8NFT2 490 aa11.28□□□□□ -0.6
TCOF1-210ENST00000506767 OR1K1Q8NGR3 316 aa11.28□□□□□ -0.6
TCOF1-210ENST00000506767 KISS1RQ969F8 398 aaPredicted RBP11.28□□□□□ -0.6
TCOF1-210ENST00000506767 RBP7Q96R05 134 aa11.28□□□□□ -0.6
TCOF1-210ENST00000506767 SPOCK3Q9BQ16 436 aa11.28□□□□□ -0.6
TCOF1-210ENST00000506767 USB1Q9BQ65 265 aaKnown RBP11.28□□□□□ -0.6
TCOF1-210ENST00000506767 NELFAQ9H3P2 528 aa11.28□□□□□ -0.6
TCOF1-210ENST00000506767 SLC25A19Q9HC21 320 aa11.28□□□□□ -0.6
TCOF1-210ENST00000506767 NKX1-2Q9UD57 310 aaPredicted RBP11.28□□□□□ -0.6
TCOF1-210ENST00000506767 MAST4O15021 2626 aa11.28□□□□□ -0.6
TCOF1-210ENST00000506767 LRRK2Q5S007 2527 aa11.28□□□□□ -0.6
TCOF1-210ENST00000506767 SPTBN1Q01082 2364 aaKnown RBP11.27□□□□□ -0.6
TCOF1-210ENST00000506767 CIB4A0PJX0 185 aa11.27□□□□□ -0.61
TCOF1-210ENST00000506767 ZNF99A8MXY4 864 aaPredicted RBP11.27□□□□□ -0.61
TCOF1-210ENST00000506767 E9PQ18 207 aa11.27□□□□□ -0.61
TCOF1-210ENST00000506767 H7C1C5 153 aa11.27□□□□□ -0.61
TCOF1-210ENST00000506767 MGRN1O60291 552 aa11.27□□□□□ -0.61
TCOF1-210ENST00000506767 RAD51DO75771 328 aa11.27□□□□□ -0.61
TCOF1-210ENST00000506767 SLC2A10O95528 541 aa11.27□□□□□ -0.61
TCOF1-210ENST00000506767 PPP3CBP16298 524 aa11.27□□□□□ -0.61
TCOF1-210ENST00000506767 POU1F1P28069 291 aa11.27□□□□□ -0.61
TCOF1-210ENST00000506767 NOS3P29474 1203 aa11.27□□□□□ -0.61
TCOF1-210ENST00000506767 GRK5P34947 590 aa11.27□□□□□ -0.61
TCOF1-210ENST00000506767 LCN6P62502 163 aa11.27□□□□□ -0.61
TCOF1-210ENST00000506767 ARF1P84077 181 aaKnown RBP11.27□□□□□ -0.61
TCOF1-210ENST00000506767 FMODQ06828 376 aa11.27□□□□□ -0.61
TCOF1-210ENST00000506767 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.27□□□□□ -0.61
TCOF1-210ENST00000506767 CD47Q08722 323 aa11.27□□□□□ -0.61
TCOF1-210ENST00000506767 SNTB1Q13884 538 aaKnown RBP11.27□□□□□ -0.61
TCOF1-210ENST00000506767 PTGES3Q15185 160 aaKnown RBP11.27□□□□□ -0.61
TCOF1-210ENST00000506767 SLC35F1Q5T1Q4 408 aa11.27□□□□□ -0.61
TCOF1-210ENST00000506767 SP5Q6BEB4 398 aaPredicted RBP11.27□□□□□ -0.61
TCOF1-210ENST00000506767 ZBTB49Q6ZSB9 765 aa11.27□□□□□ -0.61
TCOF1-210ENST00000506767 IQCF1Q8N6M8 205 aa11.27□□□□□ -0.61
TCOF1-210ENST00000506767 NPEPL1Q8NDH3 523 aa11.27□□□□□ -0.61
TCOF1-210ENST00000506767 OR52E2Q8NGJ4 325 aa11.27□□□□□ -0.61
TCOF1-210ENST00000506767 OR4K13Q8NH42 304 aa11.27□□□□□ -0.61
TCOF1-210ENST00000506767 BCL2L2Q92843 193 aaPredicted RBP11.27□□□□□ -0.61
TCOF1-210ENST00000506767 EME1Q96AY2 570 aa11.27□□□□□ -0.61
TCOF1-210ENST00000506767 S100PBPQ96BU1 408 aa11.27□□□□□ -0.61
TCOF1-210ENST00000506767 WFIKKN1Q96NZ8 548 aa11.27□□□□□ -0.61
TCOF1-210ENST00000506767 NMNAT3Q96T66 252 aa11.27□□□□□ -0.61
TCOF1-210ENST00000506767 GABARAPL3Q9BY60 117 aa11.27□□□□□ -0.61
TCOF1-210ENST00000506767 ACTR6Q9GZN1 396 aa11.27□□□□□ -0.61
TCOF1-210ENST00000506767 ENOPH1Q9UHY7 261 aa11.27□□□□□ -0.61
TCOF1-210ENST00000506767 UGT2A1Q9Y4X1 527 aa11.27□□□□□ -0.61
TCOF1-210ENST00000506767 OR6C68A6NDL8 312 aa11.26□□□□□ -0.61
TCOF1-210ENST00000506767 OR5H1A6NKK0 313 aa11.26□□□□□ -0.61
TCOF1-210ENST00000506767 ZAR1LA6NP61 321 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms