RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 ZNF584Q8IVC4 421 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 SKA3Q8IX90 412 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 FGFBP3Q8TAT2 258 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 FAM168AQ92567 244 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 HIST1H2ACQ93077 130 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 ZNF566Q969W8 418 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 NMD3Q96D46 503 aaKnown RBP7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 SGTBQ96EQ0 304 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 PRRC1Q96M27 445 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 TNFRSF13CQ96RJ3 184 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 DOK1Q99704 481 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 MYLK2Q9H1R3 596 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 MAN2C1Q9NTJ4 1040 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 TMEM38BQ9NVV0 291 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 FBXO9Q9UK97 447 aaPredicted RBP7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 ADAM21Q9UKJ8 722 aa7.84□□□□□ -1.15
PDLIM5-209ENST00000506632 A0A1W2PRG6 482 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 HTR3EA5X5Y0 456 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 hCG_2039718K7EN88 272 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 NDUFS8O00217 210 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 FFAR1O14842 300 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 PIP5K1CO60331 668 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 CCDC22O60826 627 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 PRSS23O95084 383 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 UBL3O95164 117 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 IGHG1P01857 330 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 TP53P04637 393 aaPredicted RBP7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 F13BP05160 661 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 QDPRP09417 244 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 NPR2P20594 1047 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 AQP2P41181 271 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 GIPRP48546 466 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 GSK3BP49841 420 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 SLC7A2P52569 658 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 RAB1AP62820 205 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 PIGFQ07326 219 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 ST3GAL3Q11203 375 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 SNTB2Q13425 540 aaKnown RBP7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 FHL1Q13642 323 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 FXNQ16595 210 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 C10orf128Q5T292 105 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 ARMC4Q5T2S8 1044 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 KRT80Q6KB66 452 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 VHLLQ6RSH7 139 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 CBLL1Q75N03 491 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 VTCN1Q7Z7D3 282 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 OFCC1Q8IZS5 231 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 SLC22A24Q8N4F4 322 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 NOXO1Q8NFA2 376 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 MOSPD2Q8NHP6 518 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 ASB10Q8WXI3 467 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 LZICQ8WZA0 190 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 TPD52L3Q96J77 140 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 ZNF347Q96SE7 839 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 HOPXQ9BPY8 73 aaPredicted RBP7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 EFCAB1Q9HAE3 211 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 MYOZ1Q9NP98 299 aaPredicted RBP7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 INIPQ9NRY2 104 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 ABCD2Q9UBJ2 740 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 FBXL3Q9UKT7 428 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 HIF3AQ9Y2N7 669 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 MED31Q9Y3C7 131 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 SNX13Q9Y5W8 968 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 FKBP7Q9Y680 259 aa7.83□□□□□ -1.16
PDLIM5-209ENST00000506632 KIAA1324LA8MWY0 1029 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 CXCR6O00574 342 aa7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 ENTPD5O75356 428 aa7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 TRMUO75648 421 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 RAB36O95755 333 aa7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 IGHMP01871 453 aa7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 SERPINA5P05154 406 aa7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 PATE4P0C8F1 98 aa7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 OR8G3PP0DMU2 310 aa7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 ACADSP16219 412 aa7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 GLRXP35754 106 aa7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 PTDSS1P48651 473 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 EVX1P49640 407 aa7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 PDLIM4P50479 330 aa7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 DAP3P51398 398 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 RAB39AQ14964 217 aa7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 C6orf52Q5T4I8 152 aa7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 HDDC2Q7Z4H3 204 aa7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 SPATA21Q7Z572 469 aa7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 TSEN54Q7Z6J9 526 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 DPPA2Q7Z7J5 298 aa7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 CDK20Q8IZL9 346 aa7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 SVOPLQ8N434 492 aa7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 ANKS4BQ8N8V4 417 aa7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 LRRC75AQ8NAA5 344 aa7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 GEMIN6Q8WXD5 167 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 HDAC2Q92769 488 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 MCHR2Q969V1 340 aa7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 MRPL24Q96A35 216 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 BPIFA2Q96DR5 249 aa7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 SH3GL3Q99963 347 aa7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 VRK1Q99986 396 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 MRPL37Q9BZE1 423 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 TXNIPQ9H3M7 391 aa7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 SMURF2Q9HAU4 748 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms