RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 PERPQ96FX8 193 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 SLC25A44Q96H78 314 aaPredicted RBP11.45□□□□□ -0.58
TCOF1-209ENST00000506630 BOD1Q96IK1 185 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 DHRS1Q96LJ7 313 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 IL1RAPQ9NPH3 570 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 GLTPQ9NZD2 209 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 AURKCQ9UQB9 309 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 COL6A5A8TX70 2615 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 USF3Q68DE3 2245 aa11.44□□□□□ -0.58
TCOF1-209ENST00000506630 ARPC4-TTLL3A0A0A6YYG9 625 aa11.44□□□□□ -0.58
TCOF1-209ENST00000506630 TRMUO75648 421 aaKnown RBP11.44□□□□□ -0.58
TCOF1-209ENST00000506630 B4GALT1P15291 398 aa11.44□□□□□ -0.58
TCOF1-209ENST00000506630 CD40P25942 277 aa11.44□□□□□ -0.58
TCOF1-209ENST00000506630 CDH11P55287 796 aa11.44□□□□□ -0.58
TCOF1-209ENST00000506630 CTXN1P60606 82 aa11.44□□□□□ -0.58
TCOF1-209ENST00000506630 RPS4XP62701 263 aaKnown RBP11.44□□□□□ -0.58
TCOF1-209ENST00000506630 MYBPC1Q00872 1141 aa11.44□□□□□ -0.58
TCOF1-209ENST00000506630 SEC23BQ15437 767 aa11.44□□□□□ -0.58
TCOF1-209ENST00000506630 ZNF672Q499Z4 452 aaPredicted RBP11.44□□□□□ -0.58
TCOF1-209ENST00000506630 C1QTNF12Q5T7M4 302 aa11.44□□□□□ -0.58
TCOF1-209ENST00000506630 SLC22A25Q6T423 547 aa11.44□□□□□ -0.58
TCOF1-209ENST00000506630 ZNF813Q6ZN06 617 aa11.44□□□□□ -0.58
TCOF1-209ENST00000506630 TMPRSS11FQ6ZWK6 438 aa11.44□□□□□ -0.58
TCOF1-209ENST00000506630 MAGEE2Q8TD90 523 aaPredicted RBP11.44□□□□□ -0.58
TCOF1-209ENST00000506630 FBXW5Q969U6 566 aa11.44□□□□□ -0.58
TCOF1-209ENST00000506630 SLC7A6OSQ96CW6 309 aaPredicted RBP11.44□□□□□ -0.58
TCOF1-209ENST00000506630 TNFRSF13CQ96RJ3 184 aa11.44□□□□□ -0.58
TCOF1-209ENST00000506630 ZNF347Q96SE7 839 aa11.44□□□□□ -0.58
TCOF1-209ENST00000506630 FOXB1Q99853 325 aa11.44□□□□□ -0.58
TCOF1-209ENST00000506630 TRIM15Q9C019 465 aa11.44□□□□□ -0.58
TCOF1-209ENST00000506630 NDEL1Q9GZM8 345 aa11.44□□□□□ -0.58
TCOF1-209ENST00000506630 TXNIPQ9H3M7 391 aa11.44□□□□□ -0.58
TCOF1-209ENST00000506630 STX18Q9P2W9 335 aaKnown RBP11.44□□□□□ -0.58
TCOF1-209ENST00000506630 POU2F3Q9UKI9 436 aa11.44□□□□□ -0.58
TCOF1-209ENST00000506630 MGAT4BQ9UQ53 548 aa11.44□□□□□ -0.58
TCOF1-209ENST00000506630 RTTNQ86VV8 2226 aa11.44□□□□□ -0.58
TCOF1-209ENST00000506630 SH3PXD2BA1X283 911 aa11.43□□□□□ -0.58
TCOF1-209ENST00000506630 NPIPB13A6NJU9 1138 aa11.43□□□□□ -0.58
TCOF1-209ENST00000506630 SHISA9B4DS77 424 aa11.43□□□□□ -0.58
TCOF1-209ENST00000506630 NPIPB4C9JG80 1138 aa11.43□□□□□ -0.58
TCOF1-209ENST00000506630 CRLF1O75462 422 aa11.43□□□□□ -0.58
TCOF1-209ENST00000506630 IGHMP01871 453 aa11.43□□□□□ -0.58
TCOF1-209ENST00000506630 QDPRP09417 244 aa11.43□□□□□ -0.58
TCOF1-209ENST00000506630 HOXB1P14653 301 aaPredicted RBP11.43□□□□□ -0.58
TCOF1-209ENST00000506630 ACADSP16219 412 aa11.43□□□□□ -0.58
TCOF1-209ENST00000506630 RPL4P36578 427 aaKnown RBP11.43□□□□□ -0.58
TCOF1-209ENST00000506630 ACVR1BP36896 505 aa11.43□□□□□ -0.58
TCOF1-209ENST00000506630 OMPP47874 163 aa11.43□□□□□ -0.58
TCOF1-209ENST00000506630 RPL27P61353 136 aaKnown RBP11.43□□□□□ -0.58
TCOF1-209ENST00000506630 CHRNB3Q05901 458 aa11.43□□□□□ -0.58
TCOF1-209ENST00000506630 RUNX1T1Q06455 604 aa11.43□□□□□ -0.58
TCOF1-209ENST00000506630 CD47Q08722 323 aa11.43□□□□□ -0.58
TCOF1-209ENST00000506630 ANKDD1AQ495B1 522 aa11.43□□□□□ -0.58
TCOF1-209ENST00000506630 ZBED5Q49AG3 693 aa11.43□□□□□ -0.58
TCOF1-209ENST00000506630 ARMC4Q5T2S8 1044 aa11.43□□□□□ -0.58
TCOF1-209ENST00000506630 DEPDC4Q8N2C3 294 aa11.43□□□□□ -0.58
TCOF1-209ENST00000506630 SYT14Q8NB59 555 aa11.43□□□□□ -0.58
TCOF1-209ENST00000506630 LILRB1Q8NHL6 650 aaPredicted RBP11.43□□□□□ -0.58
TCOF1-209ENST00000506630 RSRC1Q96IZ7 334 aaKnown RBP11.43□□□□□ -0.58
TCOF1-209ENST00000506630 RADILQ96JH8 1075 aa11.43□□□□□ -0.58
TCOF1-209ENST00000506630 SLC38A2Q96QD8 506 aa11.43□□□□□ -0.58
TCOF1-209ENST00000506630 KCNS3Q9BQ31 491 aa11.43□□□□□ -0.58
TCOF1-209ENST00000506630 BTBD10Q9BSF8 475 aa11.43□□□□□ -0.58
TCOF1-209ENST00000506630 MAGIXQ9H6Y5 334 aa11.43□□□□□ -0.58
TCOF1-209ENST00000506630 TMCC3Q9ULS5 477 aa11.43□□□□□ -0.58
TCOF1-209ENST00000506630 IGHV1-18A0A0C4DH31 117 aa11.42□□□□□ -0.58
TCOF1-209ENST00000506630 CENPBD1B2RD01 187 aa11.42□□□□□ -0.58
TCOF1-209ENST00000506630 DHHO43323 396 aa11.42□□□□□ -0.58
TCOF1-209ENST00000506630 OR10H3O60404 316 aa11.42□□□□□ -0.58
TCOF1-209ENST00000506630 DNAJC8O75937 253 aaPredicted RBP11.42□□□□□ -0.58
TCOF1-209ENST00000506630 CD79AP11912 226 aa11.42□□□□□ -0.58
TCOF1-209ENST00000506630 PAX7P23759 505 aa11.42□□□□□ -0.58
TCOF1-209ENST00000506630 MAGEA2P43356 314 aa11.42□□□□□ -0.58
TCOF1-209ENST00000506630 LIMS1P48059 325 aa11.42□□□□□ -0.58
TCOF1-209ENST00000506630 ZNF84P51523 738 aa11.42□□□□□ -0.58
TCOF1-209ENST00000506630 TRAP1Q12931 704 aaKnown RBP11.42□□□□□ -0.58
TCOF1-209ENST00000506630 NPRL3Q12980 569 aa11.42□□□□□ -0.58
TCOF1-209ENST00000506630 FHL1Q13642 323 aa11.42□□□□□ -0.58
TCOF1-209ENST00000506630 TAF11Q15544 211 aa11.42□□□□□ -0.58
TCOF1-209ENST00000506630 FAM98BQ52LJ0 330 aaKnown RBP11.42□□□□□ -0.58
TCOF1-209ENST00000506630 PIWIL3Q7Z3Z3 882 aaKnown RBP11.42□□□□□ -0.58
TCOF1-209ENST00000506630 MDP1Q86V88 176 aa11.42□□□□□ -0.58
TCOF1-209ENST00000506630 ZNF611Q8N823 705 aa11.42□□□□□ -0.58
TCOF1-209ENST00000506630 LRRC75AQ8NAA5 344 aa11.42□□□□□ -0.58
TCOF1-209ENST00000506630 HDAC2Q92769 488 aaKnown RBP11.42□□□□□ -0.58
TCOF1-209ENST00000506630 MCHR2Q969V1 340 aa11.42□□□□□ -0.58
TCOF1-209ENST00000506630 TSPAN32Q96QS1 320 aa11.42□□□□□ -0.58
TCOF1-209ENST00000506630 FUZQ9BT04 418 aa11.42□□□□□ -0.58
TCOF1-209ENST00000506630 GSX2Q9BZM3 304 aa11.42□□□□□ -0.58
TCOF1-209ENST00000506630 MOV10Q9HCE1 1003 aaKnown RBP11.42□□□□□ -0.58
TCOF1-209ENST00000506630 CISD1Q9NZ45 108 aaKnown RBP11.42□□□□□ -0.58
TCOF1-209ENST00000506630 ZNF346Q9UL40 294 aaKnown RBP11.42□□□□□ -0.58
TCOF1-209ENST00000506630 LAMP3Q9UQV4 416 aa11.42□□□□□ -0.58
TCOF1-209ENST00000506630 ATP23Q9Y6H3 246 aa11.42□□□□□ -0.58
TCOF1-209ENST00000506630 ARFGEF3Q5TH69 2177 aa11.42□□□□□ -0.58
TCOF1-209ENST00000506630 ATRQ13535 2644 aa11.41□□□□□ -0.58
TCOF1-209ENST00000506630 STAB1Q9NY15 2570 aa11.41□□□□□ -0.58
TCOF1-209ENST00000506630 TLN2Q9Y4G6 2542 aa11.41□□□□□ -0.58
TCOF1-209ENST00000506630 ZNF503-AS2A6NEH8 195 aa11.41□□□□□ -0.58
TCOF1-209ENST00000506630 UNC119BA6NIH7 251 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms