RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 NANOGNBQ7Z5D8 188 aa17.18■□□□□ 0.34
UBE2D3-220ENST00000505307 TMEM38BQ9NVV0 291 aa17.18■□□□□ 0.34
UBE2D3-220ENST00000505307 BAG5Q9UL15 447 aa17.18■□□□□ 0.34
UBE2D3-220ENST00000505307 KPNA4O00629 521 aaPredicted RBP17.17■□□□□ 0.34
UBE2D3-220ENST00000505307 PGA4P0DJD7 388 aa17.17■□□□□ 0.34
UBE2D3-220ENST00000505307 PGA3P0DJD8 388 aa17.17■□□□□ 0.34
UBE2D3-220ENST00000505307 PCMT1P22061 227 aa17.17■□□□□ 0.34
UBE2D3-220ENST00000505307 RBM34P42696 430 aaKnown RBP17.17■□□□□ 0.34
UBE2D3-220ENST00000505307 GZMMP51124 257 aa17.17■□□□□ 0.34
UBE2D3-220ENST00000505307 SELENOVP59797 346 aa17.17■□□□□ 0.34
UBE2D3-220ENST00000505307 MRPS11P82912 194 aaKnown RBP17.17■□□□□ 0.34
UBE2D3-220ENST00000505307 MSMPQ1L6U9 139 aa17.17■□□□□ 0.34
UBE2D3-220ENST00000505307 CR1LQ2VPA4 569 aa17.17■□□□□ 0.34
UBE2D3-220ENST00000505307 COQ5Q5HYK3 327 aa17.17■□□□□ 0.34
UBE2D3-220ENST00000505307 NANOGP8Q6NSW7 305 aa17.17■□□□□ 0.34
UBE2D3-220ENST00000505307 TMEM53Q6P2H8 277 aa17.17■□□□□ 0.34
UBE2D3-220ENST00000505307 LRRC17Q8N6Y2 441 aa17.17■□□□□ 0.34
UBE2D3-220ENST00000505307 OR8J3Q8NGG0 315 aa17.17■□□□□ 0.34
UBE2D3-220ENST00000505307 C1orf159Q96HA4 380 aa17.17■□□□□ 0.34
UBE2D3-220ENST00000505307 TPK1Q9H3S4 243 aa17.17■□□□□ 0.34
UBE2D3-220ENST00000505307 NANOGQ9H9S0 305 aa17.17■□□□□ 0.34
UBE2D3-220ENST00000505307 ARGLU1Q9NWB6 273 aaPredicted RBP17.17■□□□□ 0.34
UBE2D3-220ENST00000505307 STX18Q9P2W9 335 aaKnown RBP17.17■□□□□ 0.34
UBE2D3-220ENST00000505307 GPR160Q9UJ42 338 aa17.17■□□□□ 0.34
UBE2D3-220ENST00000505307 A0A1W2PRG6 482 aa17.16■□□□□ 0.34
UBE2D3-220ENST00000505307 IFNA14P01570 189 aa17.16■□□□□ 0.34
UBE2D3-220ENST00000505307 MT-ND1P03886 318 aa17.16■□□□□ 0.34
UBE2D3-220ENST00000505307 QDPRP09417 244 aa17.16■□□□□ 0.34
UBE2D3-220ENST00000505307 ZNF84P51523 738 aa17.16■□□□□ 0.34
UBE2D3-220ENST00000505307 CLRN1P58418 232 aa17.16■□□□□ 0.34
UBE2D3-220ENST00000505307 SLC36A2Q495M3 483 aa17.16■□□□□ 0.34
UBE2D3-220ENST00000505307 ERICH5Q6P6B1 374 aa17.16■□□□□ 0.34
UBE2D3-220ENST00000505307 TSPYL5Q86VY4 417 aaPredicted RBP17.16■□□□□ 0.34
UBE2D3-220ENST00000505307 OR1J2Q8NGS2 313 aa17.16■□□□□ 0.34
UBE2D3-220ENST00000505307 RDH5Q92781 318 aa17.16■□□□□ 0.34
UBE2D3-220ENST00000505307 SNX18Q96RF0 628 aa17.16■□□□□ 0.34
UBE2D3-220ENST00000505307 ECSITQ9BQ95 431 aa17.16■□□□□ 0.34
UBE2D3-220ENST00000505307 SYT3Q9BQG1 590 aa17.16■□□□□ 0.34
UBE2D3-220ENST00000505307 PRSS27Q9BQR3 290 aa17.16■□□□□ 0.34
UBE2D3-220ENST00000505307 SOX7Q9BT81 388 aa17.16■□□□□ 0.34
UBE2D3-220ENST00000505307 BLOC1S5-TXNDC5H3BN57 136 aa17.15■□□□□ 0.34
UBE2D3-220ENST00000505307 ACHEP22303 614 aa17.15■□□□□ 0.34
UBE2D3-220ENST00000505307 DAP3P51398 398 aaKnown RBP17.15■□□□□ 0.34
UBE2D3-220ENST00000505307 CDH15P55291 814 aa17.15■□□□□ 0.34
UBE2D3-220ENST00000505307 TMEM33P57088 247 aa17.15■□□□□ 0.34
UBE2D3-220ENST00000505307 MELKQ14680 651 aa17.15■□□□□ 0.34
UBE2D3-220ENST00000505307 HIST3H3Q16695 136 aa17.15■□□□□ 0.34
UBE2D3-220ENST00000505307 LIPNQ5VXI9 398 aa17.15■□□□□ 0.34
UBE2D3-220ENST00000505307 RGS7BPQ6MZT1 257 aaPredicted RBP17.15■□□□□ 0.34
UBE2D3-220ENST00000505307 CARM1Q86X55 608 aa17.15■□□□□ 0.34
UBE2D3-220ENST00000505307 CALHM3Q86XJ0 350 aa17.15■□□□□ 0.34
UBE2D3-220ENST00000505307 ZNF584Q8IVC4 421 aa17.15■□□□□ 0.34
UBE2D3-220ENST00000505307 SLC30A7Q8NEW0 376 aa17.15■□□□□ 0.34
UBE2D3-220ENST00000505307 LRRC58Q96CX6 371 aa17.15■□□□□ 0.34
UBE2D3-220ENST00000505307 LRMDAQ9H2I8 198 aa17.15■□□□□ 0.34
UBE2D3-220ENST00000505307 RNF121Q9H920 327 aa17.15■□□□□ 0.34
UBE2D3-220ENST00000505307 MEPEQ9NQ76 525 aaPredicted RBP17.15■□□□□ 0.34
UBE2D3-220ENST00000505307 DUSP13Q9UII6 198 aa17.15■□□□□ 0.34
UBE2D3-220ENST00000505307 TMEFF2Q9UIK5 374 aaPredicted RBP17.15■□□□□ 0.34
UBE2D3-220ENST00000505307 SH3GLB1Q9Y371 365 aa17.15■□□□□ 0.34
UBE2D3-220ENST00000505307 SVEP1Q4LDE5 3571 aa17.15■□□□□ 0.34
UBE2D3-220ENST00000505307 BBIP1A8MTZ0 92 aa17.14■□□□□ 0.33
UBE2D3-220ENST00000505307 MCIDASD6RGH6 385 aa17.14■□□□□ 0.33
UBE2D3-220ENST00000505307 FBP2O00757 339 aa17.14■□□□□ 0.33
UBE2D3-220ENST00000505307 OR5F1O95221 314 aa17.14■□□□□ 0.33
UBE2D3-220ENST00000505307 SNAP29O95721 258 aa17.14■□□□□ 0.33
UBE2D3-220ENST00000505307 PATE4P0C8F1 98 aa17.14■□□□□ 0.33
UBE2D3-220ENST00000505307 THRBP10828 461 aa17.14■□□□□ 0.33
UBE2D3-220ENST00000505307 FUT1P19526 365 aa17.14■□□□□ 0.33
UBE2D3-220ENST00000505307 ALDH3B1P43353 468 aa17.14■□□□□ 0.33
UBE2D3-220ENST00000505307 CRYBA2P53672 197 aa17.14■□□□□ 0.33
UBE2D3-220ENST00000505307 TAS2R41P59536 307 aa17.14■□□□□ 0.33
UBE2D3-220ENST00000505307 PLP2Q04941 152 aa17.14■□□□□ 0.33
UBE2D3-220ENST00000505307 KRTAP24-1Q3LI83 254 aa17.14■□□□□ 0.33
UBE2D3-220ENST00000505307 MMEL1Q495T6 779 aa17.14■□□□□ 0.33
UBE2D3-220ENST00000505307 ELFN2Q5R3F8 820 aa17.14■□□□□ 0.33
UBE2D3-220ENST00000505307 IL17RELQ6ZVW7 336 aa17.14■□□□□ 0.33
UBE2D3-220ENST00000505307 SLC16A14Q7RTX9 510 aa17.14■□□□□ 0.33
UBE2D3-220ENST00000505307 OR4K5Q8NGD3 323 aa17.14■□□□□ 0.33
UBE2D3-220ENST00000505307 FGFBP3Q8TAT2 258 aa17.14■□□□□ 0.33
UBE2D3-220ENST00000505307 LIPHQ8WWY8 451 aa17.14■□□□□ 0.33
UBE2D3-220ENST00000505307 MCHR2Q969V1 340 aa17.14■□□□□ 0.33
UBE2D3-220ENST00000505307 SEPHS2Q99611 448 aa17.14■□□□□ 0.33
UBE2D3-220ENST00000505307 SH3GL3Q99963 347 aa17.14■□□□□ 0.33
UBE2D3-220ENST00000505307 MRPL13Q9BYD1 178 aaKnown RBP17.14■□□□□ 0.33
UBE2D3-220ENST00000505307 CDH20Q9HBT6 801 aa17.14■□□□□ 0.33
UBE2D3-220ENST00000505307 IQCMA0A1B0GVH7 501 aa17.13■□□□□ 0.33
UBE2D3-220ENST00000505307 A0A1W2PPW3 197 aa17.13■□□□□ 0.33
UBE2D3-220ENST00000505307 HTR3EA5X5Y0 456 aa17.13■□□□□ 0.33
UBE2D3-220ENST00000505307 B4DSR2 109 aa17.13■□□□□ 0.33
UBE2D3-220ENST00000505307 LYNX1G3V0Z9 82 aa17.13■□□□□ 0.33
UBE2D3-220ENST00000505307 OR7A10O76100 309 aa17.13■□□□□ 0.33
UBE2D3-220ENST00000505307 LYNX1P0DP58 116 aa17.13■□□□□ 0.33
UBE2D3-220ENST00000505307 TROVE2P10155 538 aaKnown RBP eCLIP17.13■□□□□ 0.332e-9■□□□□ 10
UBE2D3-220ENST00000505307 NR2C1P13056 603 aa17.13■□□□□ 0.33
UBE2D3-220ENST00000505307 IL2RGP31785 369 aa17.13■□□□□ 0.33
UBE2D3-220ENST00000505307 RAD52P43351 418 aa17.13■□□□□ 0.33
UBE2D3-220ENST00000505307 GPR6P46095 362 aaPredicted RBP17.13■□□□□ 0.33
UBE2D3-220ENST00000505307 ZNF133P52736 654 aaPredicted RBP17.13■□□□□ 0.33
UBE2D3-220ENST00000505307 DVL1P1P54792 670 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms