RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 ULBP2Q9BZM5 246 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 OR51I1Q9H343 314 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 CENPHQ9H3R5 247 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 GSTO2Q9H4Y5 243 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 TNFRSF12AQ9NP84 129 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 TCF7L2Q9NQB0 619 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 ATP6V1HQ9UI12 483 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 VPREB3Q9UKI3 123 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 ZDHHC8Q9ULC8 765 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 IGHV1-69DA0A0B4J2H0 117 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 FTCDNL1E5RQL4 147 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 E9PQ18 207 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 P2RY10O00398 339 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 TOX4O94842 621 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 AHSA1O95433 338 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 SNAP29O95721 258 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 IGHV1-69P01742 117 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 UQCRBP14927 111 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 CFHR2P36980 270 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 RPS5P46782 204 aaKnown RBP10.37□□□□□ -0.75
LSM6-204ENST00000504181 LSM12Q3MHD2 195 aaKnown RBP10.37□□□□□ -0.75
LSM6-204ENST00000504181 ZNF718Q3SXZ3 478 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 RFTN2Q52LD8 501 aaPredicted RBP10.37□□□□□ -0.75
LSM6-204ENST00000504181 ATAD3BQ5T9A4 648 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 ATG16L1Q676U5 607 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 VASH1Q7L8A9 365 aaPredicted RBP10.37□□□□□ -0.75
LSM6-204ENST00000504181 MIER2Q8N344 545 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 OR4F17Q8NGA8 305 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 OR2T11Q8NH01 316 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 MFSD8Q8NHS3 518 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 XAGE5Q8WWM1 108 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 LHX4Q969G2 390 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 ROPN1LQ96C74 230 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 CCDC126Q96EE4 140 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 L3HYPDHQ96EM0 354 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 NEIL1Q96FI4 390 aaPredicted RBP10.37□□□□□ -0.75
LSM6-204ENST00000504181 OR4F4Q96R69 305 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 SH3GL3Q99963 347 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 RHOXF2Q9BQY4 288 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 PPA2Q9H2U2 334 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 RNF121Q9H920 327 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 POLE3Q9NRF9 147 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 MIOXQ9UGB7 285 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 SNX12Q9UMY4 172 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 HERC2O95714 4834 aa10.37□□□□□ -0.75
LSM6-204ENST00000504181 BTBD17A6NE02 478 aa10.36□□□□□ -0.75
LSM6-204ENST00000504181 NPIPB7O75200 414 aa10.36□□□□□ -0.75
LSM6-204ENST00000504181 GKN3PP0CG01 181 aa10.36□□□□□ -0.75
LSM6-204ENST00000504181 NHLRC4P0CG21 123 aaPredicted RBP10.36□□□□□ -0.75
LSM6-204ENST00000504181 VSIG10L2P0DP72 767 aa10.36□□□□□ -0.75
LSM6-204ENST00000504181 CCNOP22674 350 aa10.36□□□□□ -0.75
LSM6-204ENST00000504181 CRHR1P34998 444 aa10.36□□□□□ -0.75
LSM6-204ENST00000504181 PITPNBP48739 271 aa10.36□□□□□ -0.75
LSM6-204ENST00000504181 HBA1P69905 142 aa10.36□□□□□ -0.75
LSM6-204ENST00000504181 EMX1Q04741 257 aaPredicted RBP10.36□□□□□ -0.75
LSM6-204ENST00000504181 GSTA3Q16772 222 aa10.36□□□□□ -0.75
LSM6-204ENST00000504181 GALNTL6Q49A17 601 aa10.36□□□□□ -0.75
LSM6-204ENST00000504181 GPAT3Q53EU6 434 aa10.36□□□□□ -0.75
LSM6-204ENST00000504181 SLC27A4Q6P1M0 643 aa10.36□□□□□ -0.75
LSM6-204ENST00000504181 PIWIL3Q7Z3Z3 882 aaKnown RBP10.36□□□□□ -0.75
LSM6-204ENST00000504181 SNX32Q86XE0 403 aa10.36□□□□□ -0.75
LSM6-204ENST00000504181 PDZD9Q8IXQ8 264 aa10.36□□□□□ -0.75
LSM6-204ENST00000504181 SLC35F6Q8N357 371 aa10.36□□□□□ -0.75
LSM6-204ENST00000504181 CCNYL1Q8N7R7 359 aa10.36□□□□□ -0.75
LSM6-204ENST00000504181 OR1J2Q8NGS2 313 aa10.36□□□□□ -0.75
LSM6-204ENST00000504181 OR6N1Q8NGY5 312 aa10.36□□□□□ -0.75
LSM6-204ENST00000504181 SLC25A40Q8TBP6 338 aa10.36□□□□□ -0.75
LSM6-204ENST00000504181 LRR1Q96L50 414 aa10.36□□□□□ -0.75
LSM6-204ENST00000504181 MECRQ9BV79 373 aa10.36□□□□□ -0.75
LSM6-204ENST00000504181 PTDSS2Q9BVG9 487 aa10.36□□□□□ -0.75
LSM6-204ENST00000504181 CNTD2Q9H8S5 307 aa10.36□□□□□ -0.75
LSM6-204ENST00000504181 CYSLTR2Q9NS75 346 aa10.36□□□□□ -0.75
LSM6-204ENST00000504181 PPP1R3CQ9UQK1 317 aa10.36□□□□□ -0.75
LSM6-204ENST00000504181 RYR1P21817 5038 aa10.35□□□□□ -0.75
LSM6-204ENST00000504181 RNF103-CHMP3A0A140T963 221 aa10.35□□□□□ -0.75
LSM6-204ENST00000504181 RNASEK-C17orf49H0YIS7 233 aa10.35□□□□□ -0.75
LSM6-204ENST00000504181 TMEM178BH3BS89 294 aa10.35□□□□□ -0.75
LSM6-204ENST00000504181 M0R082 166 aa10.35□□□□□ -0.75
LSM6-204ENST00000504181 SLC28A1O00337 649 aa10.35□□□□□ -0.75
LSM6-204ENST00000504181 AIM2O14862 343 aa10.35□□□□□ -0.75
LSM6-204ENST00000504181 GSTA1P08263 222 aa10.35□□□□□ -0.75
LSM6-204ENST00000504181 HLA-DOBP13765 273 aa10.35□□□□□ -0.75
LSM6-204ENST00000504181 CBLP22681 906 aa10.35□□□□□ -0.75
LSM6-204ENST00000504181 ATP5F1P24539 256 aaPredicted RBP10.35□□□□□ -0.75
LSM6-204ENST00000504181 RPL4P36578 427 aaKnown RBP10.35□□□□□ -0.75
LSM6-204ENST00000504181 ANP32AP39687 249 aaKnown RBP10.35□□□□□ -0.75
LSM6-204ENST00000504181 ETV4P43268 484 aa10.35□□□□□ -0.75
LSM6-204ENST00000504181 PRKAA2P54646 552 aa10.35□□□□□ -0.75
LSM6-204ENST00000504181 SMU1Q2TAY7 513 aa10.35□□□□□ -0.75
LSM6-204ENST00000504181 MRPL2Q5T653 305 aaKnown RBP10.35□□□□□ -0.75
LSM6-204ENST00000504181 TMEM53Q6P2H8 277 aa10.35□□□□□ -0.75
LSM6-204ENST00000504181 TNFAIP8L2Q6P589 184 aaPredicted RBP10.35□□□□□ -0.75
LSM6-204ENST00000504181 MEPCEQ7L2J0 689 aaKnown RBP10.35□□□□□ -0.75
LSM6-204ENST00000504181 RNF144BQ7Z419 303 aa10.35□□□□□ -0.75
LSM6-204ENST00000504181 ZNF101Q8IZC7 436 aa10.35□□□□□ -0.75
LSM6-204ENST00000504181 SLC22A24Q8N4F4 322 aa10.35□□□□□ -0.75
LSM6-204ENST00000504181 OR8B3Q8NGG8 313 aa10.35□□□□□ -0.75
LSM6-204ENST00000504181 ZNF417Q8TAU3 575 aa10.35□□□□□ -0.75
LSM6-204ENST00000504181 ITLN1Q8WWA0 313 aa10.35□□□□□ -0.75
LSM6-204ENST00000504181 OR8B2Q96RD0 313 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms