RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 MELKQ14680 651 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 KIAA0040Q15053 153 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 SYPL1Q16563 259 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 FXNQ16595 210 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 SMU1Q2TAY7 513 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 HFEQ30201 348 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 PGS1Q32NB8 556 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 C1orf140Q5VVS0 124 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 SAXO2Q658L1 398 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 OR4F3Q6IEY1 312 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 ZCCHC12Q6PEW1 402 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 SYT10Q6XYQ8 523 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 ZNF836Q6ZNA1 936 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 ZCCHC23Q6ZST2 131 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 FRMD7Q6ZUT3 714 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 RFPL4BQ6ZWI9 263 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 C6orf120Q7Z4R8 191 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 CCDC91Q7Z6B0 441 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 VRK2Q86Y07 508 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 C1orf174Q8IYL3 243 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 MUC20Q8N307 709 aaPredicted RBP3.04□□□□□ -1.92
USP46-205ENST00000504078 CELF2-AS1Q8N7Q2 184 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 ANKFN1Q8N957 763 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 CCDC63Q8NA47 563 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 C19orf18Q8NEA5 215 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 SLC30A7Q8NEW0 376 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 OR52E2Q8NGJ4 325 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 OR10S1Q8NGN2 331 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 SFXN5Q8TD22 340 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 MAGEE2Q8TD90 523 aaPredicted RBP3.04□□□□□ -1.92
USP46-205ENST00000504078 TWIST2Q8WVJ9 160 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 XAGE5Q8WWM1 108 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 SGCDQ92629 289 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 RAB1CQ92928 201 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 PHF21AQ96BD5 680 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 ROPN1LQ96C74 230 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 L3HYPDHQ96EM0 354 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 SLC47A1Q96FL8 570 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 FCRL1Q96LA6 429 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 OR2M2Q96R28 347 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 NAPGQ99747 312 aaPredicted RBP3.04□□□□□ -1.92
USP46-205ENST00000504078 GPA33Q99795 319 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 SH3GL3Q99963 347 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 PTDSS2Q9BVG9 487 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 MS4A5Q9H3V2 200 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 ZNF385DQ9H6B1 395 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 CDH20Q9HBT6 801 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 MSL2Q9HCI7 577 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 RRAGDQ9NQL2 400 aaPredicted RBP3.04□□□□□ -1.92
USP46-205ENST00000504078 DECR2Q9NUI1 292 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 B3GAT1Q9P2W7 334 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 OR5V1Q9UGF6 321 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 TBK1Q9UHD2 729 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 SLC7A8Q9UHI5 535 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 ZNF346Q9UL40 294 aaKnown RBP3.04□□□□□ -1.92
USP46-205ENST00000504078 PCDHGB4Q9UN71 923 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 FOXJ3Q9UPW0 622 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 SLC35A3Q9Y2D2 325 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 SIGLEC9Q9Y336 463 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 INSIG2Q9Y5U4 225 aa3.04□□□□□ -1.92
USP46-205ENST00000504078 NOTCH1P46531 2555 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 EXOC1LA0A1B0GW35 172 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 CFAP73A6NFT4 308 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 CEACAM18A8MTB9 384 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 SRRM5B3KS81 715 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 LRRN3E7EW58 273 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 C11orf98E9PRG8 122 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 G3V2L1 256 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 SLC28A1O00337 649 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 ZNF208O43345 1280 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 NEFHP12036 1026 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 NQO1P15559 274 aaKnown RBP3.03□□□□□ -1.92
USP46-205ENST00000504078 RPS2P15880 293 aaKnown RBP3.03□□□□□ -1.92
USP46-205ENST00000504078 ZNF43P17038 809 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 NCF2P19878 526 aaPredicted RBP3.03□□□□□ -1.92
USP46-205ENST00000504078 IMPDH1P20839 514 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 CXCR1P25024 350 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 GCAP28676 217 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 GRPRP30550 384 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 LSP1P33241 339 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 CD80P33681 288 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 PHBP35232 272 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 CHI3L1P36222 383 aaPredicted RBP3.03□□□□□ -1.92
USP46-205ENST00000504078 PAFAH1B1P43034 410 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 CRYBB2P43320 205 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 MTNR1AP48039 350 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 NME5P56597 212 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 LOXL3P58215 753 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 PROK1P58294 105 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 FGF12P61328 243 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 RAB1AP62820 205 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 KCNJ10P78508 379 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 PMS2P3Q13401 168 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 ZMYND11Q15326 602 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 NSUN5P1Q3KNT7 163 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 ARHGAP11BQ3KRB8 267 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 C3orf36Q3SXR2 165 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 ESCO2Q56NI9 601 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 CFAP157Q5JU67 520 aa3.03□□□□□ -1.92
USP46-205ENST00000504078 FAM201AQ5SY85 155 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms