RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 AKAP9Q99996 3911 aa15.91■□□□□ 0.14
PDLIM7-209ENST00000503346 A6NIZ1 184 aa15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 SHISA9B4DS77 424 aa15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 IGKV3-15P01624 115 aa15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 NR2C1P13056 603 aa15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 B4GALT1P15291 398 aa15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 RPL4P36578 427 aaKnown RBP15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 ACVR1BP36896 505 aa15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 FXYD6P3P58550 94 aa15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 RAP1BP61224 184 aa15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 RAP1AP62834 184 aa15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 TUBA1BP68363 451 aa15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 TUBA4AP68366 448 aa15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 ZNF672Q499Z4 452 aaPredicted RBP15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 C10orf128Q5T292 105 aa15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 OR2T5Q6IEZ7 315 aa15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 C1orf94Q6P1W5 598 aa15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 PGBD2Q6P3X8 592 aa15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 TUBA1AQ71U36 451 aa15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 FAM122BQ7Z309 247 aa15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 LINC00471Q8N535 108 aa15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 ARIH2OSQ8N7S6 290 aa15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 ZNF611Q8N823 705 aa15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 KBTBD8Q8NFY9 601 aa15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 OR2T29Q8NH02 315 aa15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 FNDC8Q8TC99 324 aa15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 CANT1Q8WVQ1 401 aa15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 LRMDAQ9H2I8 198 aa15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 MMADHCQ9H3L0 296 aaPredicted RBP15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 SMURF2Q9HAU4 748 aa15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 NRIP3Q9NQ35 241 aa15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 TMEM38BQ9NVV0 291 aa15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 ALPK2Q86TB3 2170 aa15.9■□□□□ 0.14
PDLIM7-209ENST00000503346 IGHV1-18A0A0C4DH31 117 aa15.89■□□□□ 0.13
PDLIM7-209ENST00000503346 TCRBV3S1A0A5B6 114 aa15.89■□□□□ 0.13
PDLIM7-209ENST00000503346 ZNF503-AS2A6NEH8 195 aa15.89■□□□□ 0.13
PDLIM7-209ENST00000503346 ENTPD5O75356 428 aa15.89■□□□□ 0.13
PDLIM7-209ENST00000503346 IGLV1-44P01699 117 aa15.89■□□□□ 0.13
PDLIM7-209ENST00000503346 CBR1P16152 277 aa15.89■□□□□ 0.13
PDLIM7-209ENST00000503346 GSSP48637 474 aa15.89■□□□□ 0.13
PDLIM7-209ENST00000503346 ERVK-25P63136 954 aa15.89■□□□□ 0.13
PDLIM7-209ENST00000503346 GK3PQ14409 553 aa15.89■□□□□ 0.13
PDLIM7-209ENST00000503346 NRN1LQ496H8 165 aa15.89■□□□□ 0.13
PDLIM7-209ENST00000503346 ZNF770Q6IQ21 691 aaPredicted RBP15.89■□□□□ 0.13
PDLIM7-209ENST00000503346 THSD4Q6ZMP0 1018 aa15.89■□□□□ 0.13
PDLIM7-209ENST00000503346 SPATA24Q86W54 205 aa15.89■□□□□ 0.13
PDLIM7-209ENST00000503346 GNPDA2Q8TDQ7 276 aa15.89■□□□□ 0.13
PDLIM7-209ENST00000503346 SLC38A2Q96QD8 506 aa15.89■□□□□ 0.13
PDLIM7-209ENST00000503346 REEP1Q9H902 201 aa15.89■□□□□ 0.13
PDLIM7-209ENST00000503346 VNN3Q9NY84 501 aa15.89■□□□□ 0.13
PDLIM7-209ENST00000503346 B3GNT2Q9NY97 397 aa15.89■□□□□ 0.13
PDLIM7-209ENST00000503346 GRHPRQ9UBQ7 328 aa15.89■□□□□ 0.13
PDLIM7-209ENST00000503346 ADAM18Q9Y3Q7 739 aa15.89■□□□□ 0.13
PDLIM7-209ENST00000503346 CCNB2O95067 398 aa15.88■□□□□ 0.13
PDLIM7-209ENST00000503346 ARR3P36575 388 aa15.88■□□□□ 0.13
PDLIM7-209ENST00000503346 ZNF84P51523 738 aa15.88■□□□□ 0.13
PDLIM7-209ENST00000503346 MYBPC1Q00872 1141 aa15.88■□□□□ 0.13
PDLIM7-209ENST00000503346 SPOCK1Q08629 439 aa15.88■□□□□ 0.13
PDLIM7-209ENST00000503346 CD47Q08722 323 aa15.88■□□□□ 0.13
PDLIM7-209ENST00000503346 TSPAN31Q12999 210 aa15.88■□□□□ 0.13
PDLIM7-209ENST00000503346 THEM4Q5T1C6 240 aa15.88■□□□□ 0.13
PDLIM7-209ENST00000503346 SMARCD3Q6STE5 483 aa15.88■□□□□ 0.13
PDLIM7-209ENST00000503346 DPY19L2P2Q6ZN68 376 aa15.88■□□□□ 0.13
PDLIM7-209ENST00000503346 PIAS4Q8N2W9 510 aaPredicted RBP15.88■□□□□ 0.13
PDLIM7-209ENST00000503346 SLC22A24Q8N4F4 322 aa15.88■□□□□ 0.13
PDLIM7-209ENST00000503346 IGFBPL1Q8WX77 278 aa15.88■□□□□ 0.13
PDLIM7-209ENST00000503346 NEUROG1Q92886 237 aa15.88■□□□□ 0.13
PDLIM7-209ENST00000503346 FBXW5Q969U6 566 aa15.88■□□□□ 0.13
PDLIM7-209ENST00000503346 FOXC2Q99958 501 aa15.88■□□□□ 0.13
PDLIM7-209ENST00000503346 ZNF224Q9NZL3 707 aa15.88■□□□□ 0.13
PDLIM7-209ENST00000503346 ITGB1BP2Q9UKP3 347 aa15.88■□□□□ 0.13
PDLIM7-209ENST00000503346 SAMHD1Q9Y3Z3 626 aaKnown RBP15.88■□□□□ 0.13
PDLIM7-209ENST00000503346 IGKV1D-43A0A0B4J1Z2 117 aa15.87■□□□□ 0.13
PDLIM7-209ENST00000503346 AHCYL1O43865 530 aa15.87■□□□□ 0.13
PDLIM7-209ENST00000503346 MGRN1O60291 552 aa15.87■□□□□ 0.13
PDLIM7-209ENST00000503346 SLC2A10O95528 541 aa15.87■□□□□ 0.13
PDLIM7-209ENST00000503346 TXNDC12O95881 172 aa15.87■□□□□ 0.13
PDLIM7-209ENST00000503346 HLA-HP01893 362 aa15.87■□□□□ 0.13
PDLIM7-209ENST00000503346 OR8G3PP0DMU2 310 aa15.87■□□□□ 0.13
PDLIM7-209ENST00000503346 APEHP13798 732 aaKnown RBP15.87■□□□□ 0.13
PDLIM7-209ENST00000503346 SDHAP31040 664 aa15.87■□□□□ 0.13
PDLIM7-209ENST00000503346 CAPZA2P47755 286 aa15.87■□□□□ 0.13
PDLIM7-209ENST00000503346 CDH11P55287 796 aa15.87■□□□□ 0.13
PDLIM7-209ENST00000503346 TESK1Q15569 626 aa15.87■□□□□ 0.13
PDLIM7-209ENST00000503346 DEFB113Q30KQ7 82 aa15.87■□□□□ 0.13
PDLIM7-209ENST00000503346 RFX4Q33E94 735 aa15.87■□□□□ 0.13
PDLIM7-209ENST00000503346 GPR139Q6DWJ6 353 aa15.87■□□□□ 0.13
PDLIM7-209ENST00000503346 SLC25A47Q6Q0C1 308 aa15.87■□□□□ 0.13
PDLIM7-209ENST00000503346 SLC22A25Q6T423 547 aa15.87■□□□□ 0.13
PDLIM7-209ENST00000503346 MDP1Q86V88 176 aa15.87■□□□□ 0.13
PDLIM7-209ENST00000503346 DEPDC4Q8N2C3 294 aa15.87■□□□□ 0.13
PDLIM7-209ENST00000503346 PAPD5Q8NDF8 572 aaKnown RBP15.87■□□□□ 0.13
PDLIM7-209ENST00000503346 OR9Q2Q8NGE9 314 aa15.87■□□□□ 0.13
PDLIM7-209ENST00000503346 FANK1Q8TC84 345 aa15.87■□□□□ 0.13
PDLIM7-209ENST00000503346 NANOS1Q8WY41 292 aaKnown RBP15.87■□□□□ 0.13
PDLIM7-209ENST00000503346 PIGTQ969N2 578 aa15.87■□□□□ 0.13
PDLIM7-209ENST00000503346 Q96M85 177 aa15.87■□□□□ 0.13
PDLIM7-209ENST00000503346 ZNF570Q96NI8 536 aa15.87■□□□□ 0.13
PDLIM7-209ENST00000503346 RBP7Q96R05 134 aa15.87■□□□□ 0.13
PDLIM7-209ENST00000503346 CCL19Q99731 98 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms