RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 SLC6A8P48029 635 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 POU3F4P49335 361 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 GBE1Q04446 702 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 CD47Q08722 323 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 KIAA0040Q15053 153 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 ACSF3Q4G176 576 aaPredicted RBP4.13□□□□□ -1.75
NIPBL-203ENST00000503274 TEX44Q53QW1 395 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.13□□□□□ -1.75
NIPBL-203ENST00000503274 KCTD16Q68DU8 428 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 GPR137CQ8N3F9 429 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 TRAM1L1Q8N609 369 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 SLC37A2Q8TED4 501 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 PATE1Q8WXA2 126 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 FAF2Q96CS3 445 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 CXorf40BQ96DE9 158 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 DNAJA3Q96EY1 480 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 IMP4Q96G21 291 aaKnown RBP4.13□□□□□ -1.75
NIPBL-203ENST00000503274 TIMM29Q9BSF4 260 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 HCAR1Q9BXC0 346 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 OR2AG1Q9H205 316 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 TRABDQ9H4I3 376 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 UCK1Q9HA47 277 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 MBD2Q9UBB5 411 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 KCNN3Q9UGI6 736 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.13□□□□□ -1.75
NIPBL-203ENST00000503274 USP9YO00507 2555 aaPredicted RBP4.13□□□□□ -1.75
NIPBL-203ENST00000503274 LRP4O75096 1905 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 TEX15Q9BXT5 2789 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 ZFC3H1O60293 1989 aaKnown RBP4.13□□□□□ -1.75
NIPBL-203ENST00000503274 UTP20O75691 2785 aaKnown RBP4.12□□□□□ -1.75
NIPBL-203ENST00000503274 SEC16AO15027 2179 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 TRBV7-9A0A0J9YWB2 115 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 SLC9B1P1A6NJY1 282 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 SLC17A2O00624 439 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 SLC4A1P02730 911 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 RALBP11234 206 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 ZNF7P17097 686 aaPredicted RBP4.12□□□□□ -1.75
NIPBL-203ENST00000503274 TCN2P20062 427 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 ZBTB25P24278 435 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 ALDH3B2P48448 385 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 SERTAD2Q14140 314 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 SPA17Q15506 151 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 LINC00303Q3SY05 128 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 AGKQ53H12 422 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 LDLRAP1Q5SW96 308 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 SLC22A10Q63ZE4 541 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 WASH2PQ6VEQ5 465 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 RFLNAQ6ZTI6 216 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 TMEM26Q6ZUK4 368 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 PID1Q7Z2X4 250 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 GOLGA7Q7Z5G4 137 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 TRAPPC5Q8IUR0 188 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 PRR22Q8IZ63 422 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 CENPSQ8N2Z9 138 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 PQLC3Q8N755 202 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 DTX3LQ8TDB6 740 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 RAPGEF5Q92565 580 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 HAUS1Q96CS2 278 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 C11orf24Q96F05 449 aaPredicted RBP4.12□□□□□ -1.75
NIPBL-203ENST00000503274 ZNF514Q96K75 400 aaPredicted RBP4.12□□□□□ -1.75
NIPBL-203ENST00000503274 C9orf72Q96LT7 481 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 PPP1R2P1Q96PQ5 205 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 VPS35Q96QK1 796 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 VAT1Q99536 393 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 MAPKAP1Q9BPZ7 522 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 ULBP3Q9BZM4 244 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 NHEJ1Q9H9Q4 299 aaPredicted RBP4.12□□□□□ -1.75
NIPBL-203ENST00000503274 DPM3Q9P2X0 92 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 ATXN10Q9UBB4 475 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 FZR1Q9UM11 496 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 MOKQ9UQ07 419 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 BSNQ9UPA5 3926 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 SCN8AQ9UQD0 1980 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 SDK2Q58EX2 2172 aa4.12□□□□□ -1.75
NIPBL-203ENST00000503274 COL27A1Q8IZC6 1860 aaPredicted RBP4.11□□□□□ -1.75
NIPBL-203ENST00000503274 A0A0U1RQS6 177 aa4.11□□□□□ -1.75
NIPBL-203ENST00000503274 HACD1B0YJ81 288 aa4.11□□□□□ -1.75
NIPBL-203ENST00000503274 MKRN2OSH3BPM6 223 aa4.11□□□□□ -1.75
NIPBL-203ENST00000503274 STX7O15400 261 aaKnown RBP4.11□□□□□ -1.75
NIPBL-203ENST00000503274 PSTPIP1O43586 416 aa4.11□□□□□ -1.75
NIPBL-203ENST00000503274 CST8O60676 142 aa4.11□□□□□ -1.75
NIPBL-203ENST00000503274 TOXO94900 526 aa4.11□□□□□ -1.75
NIPBL-203ENST00000503274 PTMAP06454 111 aaKnown RBP4.11□□□□□ -1.75
NIPBL-203ENST00000503274 PIRTP0C851 137 aa4.11□□□□□ -1.75
NIPBL-203ENST00000503274 P0C879 139 aa4.11□□□□□ -1.75
NIPBL-203ENST00000503274 ZNF19P17023 458 aa4.11□□□□□ -1.75
NIPBL-203ENST00000503274 AHCYP23526 432 aa4.11□□□□□ -1.75
NIPBL-203ENST00000503274 SPAM1P38567 509 aa4.11□□□□□ -1.75
NIPBL-203ENST00000503274 MAGEA1P43355 309 aa4.11□□□□□ -1.75
NIPBL-203ENST00000503274 RPS15P62841 145 aaKnown RBP4.11□□□□□ -1.75
NIPBL-203ENST00000503274 DYNLT1P63172 113 aa4.11□□□□□ -1.75
NIPBL-203ENST00000503274 UBE2IP63279 158 aaKnown RBP4.11□□□□□ -1.75
NIPBL-203ENST00000503274 SRSF6Q13247 344 aaKnown RBP4.11□□□□□ -1.75
NIPBL-203ENST00000503274 PRPSAP1Q14558 356 aa4.11□□□□□ -1.75
NIPBL-203ENST00000503274 DEFB109BQ30KR1 87 aa4.11□□□□□ -1.75
NIPBL-203ENST00000503274 TFDP3Q5H9I0 405 aa4.11□□□□□ -1.75
NIPBL-203ENST00000503274 IRGCQ6NXR0 463 aa4.11□□□□□ -1.75
NIPBL-203ENST00000503274 GLT6D1Q7Z4J2 308 aa4.11□□□□□ -1.75
NIPBL-203ENST00000503274 CCDC50Q8IVM0 306 aa4.11□□□□□ -1.75
NIPBL-203ENST00000503274 UBQLNLQ8IYU4 475 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms