RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 OR52B2Q96RD2 323 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 DIRC2Q96SL1 478 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 ARHGDIGQ99819 225 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 WACQ9BTA9 647 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 CCDC28BQ9BUN5 200 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 SUCNR1Q9BXA5 334 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 MRPL13Q9BYD1 178 aaKnown RBP5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 PARD6BQ9BYG5 372 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 PLA2G12AQ9BZM1 189 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 POLR2J2Q9GZM3 115 aaKnown RBP5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 POLR2J3Q9H1A7 115 aaKnown RBP5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 LRMDAQ9H2I8 198 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 METTL17Q9H7H0 456 aaPredicted RBP5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 ZMAT3Q9HA38 289 aaKnown RBP5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 NTN4Q9HB63 628 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 CYSLTR2Q9NS75 346 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 TMEM38BQ9NVV0 291 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 MED29Q9NX70 200 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 TAS2R5Q9NYW4 299 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 SH3PXD2BA1X283 911 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 GMNCA6NCL1 334 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 EVPLLA8MZ36 301 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 DHHO43323 396 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 SPRY1O43609 319 aaPredicted RBP5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 IGHV2-5P01817 119 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 IGHG1P01857 330 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 CD55P08174 381 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 ADORA3P0DMS8 318 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 CD79AP11912 226 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 AHCYP23526 432 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 RBM34P42696 430 aaKnown RBP5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 SEC24CP53992 1094 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 UCP2P55851 309 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 STX1BP61266 288 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 MRPS34P82930 218 aaKnown RBP5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 HOXC5Q00444 222 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 SLC3A1Q07837 685 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 SCARB2Q14108 478 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 TAF11Q15544 211 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 OCLNQ16625 522 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 TBC1D28Q2M2D7 210 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 ANKDD1AQ495B1 522 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 GLIPR1L2Q4G1C9 344 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 RUNDC3AQ59EK9 446 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 PRR31Q5SQ13 230 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 MBNL2Q5VZF2 373 aaKnown RBP5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 NXNQ6DKJ4 435 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 TMEM53Q6P2H8 277 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 TMEM154Q6P9G4 183 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 SHQ1Q6PI26 577 aaKnown RBP5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 LRFN4Q6PJG9 635 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 SLC2A7Q6PXP3 512 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 WDR88Q6ZMY6 472 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 SLC35D2Q76EJ3 337 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 COMTD1Q86VU5 262 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 ARMC8Q8IUR7 673 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 C10orf111Q8N326 155 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 DPP10Q8N608 796 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 CPEB3Q8NE35 698 aaKnown RBP5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 SLC30A7Q8NEW0 376 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 NFKBIDQ8NI38 313 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 NANPQ8TBE9 248 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 SYNPRQ8TBG9 265 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 SNX33Q8WV41 574 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 C11orf40Q8WZ69 217 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 TLCD1Q96CP7 247 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 SPDL1Q96EA4 605 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 TXNDC15Q96J42 360 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 LRRC37BQ96QE4 947 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 EMC6Q9BV81 110 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 TPK1Q9H3S4 243 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 RABEP2Q9H5N1 569 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 OCEL1Q9H607 264 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 ZNF665Q9H7R5 613 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 ZNF696Q9H7X3 374 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 HINT3Q9NQE9 182 aaKnown RBP5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 NANSQ9NR45 359 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 VAPAQ9P0L0 249 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 SLAMF8Q9P0V8 285 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 KLHL21Q9UJP4 597 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 SLC13A4Q9UKG4 626 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 TRIM33Q9UPN9 1127 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 ANGPT4Q9Y264 503 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 USH1CQ9Y6N9 552 aa5.21□□□□□ -1.58
LSM3P4-201ENST00000502948 IGHV1-69-2A0A0G2JMI3 117 aa5.2□□□□□ -1.58
LSM3P4-201ENST00000502948 IQCMA0A1B0GVH7 501 aa5.2□□□□□ -1.58
LSM3P4-201ENST00000502948 A0A1W2PPW3 197 aa5.2□□□□□ -1.58
LSM3P4-201ENST00000502948 TRAPPC13A5PLN9 417 aa5.2□□□□□ -1.58
LSM3P4-201ENST00000502948 CLDN25C9JDP6 229 aa5.2□□□□□ -1.58
LSM3P4-201ENST00000502948 LYNX1G3V0Z9 82 aa5.2□□□□□ -1.58
LSM3P4-201ENST00000502948 CLDN34H7C241 214 aa5.2□□□□□ -1.58
LSM3P4-201ENST00000502948 POLR3GO15318 223 aaPredicted RBP5.2□□□□□ -1.58
LSM3P4-201ENST00000502948 PPIHO43447 177 aaKnown RBP5.2□□□□□ -1.58
LSM3P4-201ENST00000502948 PLPP2O43688 288 aa5.2□□□□□ -1.58
LSM3P4-201ENST00000502948 NCR1O76036 304 aa5.2□□□□□ -1.58
LSM3P4-201ENST00000502948 SEC14L2O76054 403 aa5.2□□□□□ -1.58
LSM3P4-201ENST00000502948 OR6A2O95222 327 aa5.2□□□□□ -1.58
LSM3P4-201ENST00000502948 LYPD3O95274 346 aa5.2□□□□□ -1.58
LSM3P4-201ENST00000502948 FSTL3O95633 263 aa5.2□□□□□ -1.58
LSM3P4-201ENST00000502948 BCL10O95999 233 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms