RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 KRT16P08779 473 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 TRIM49P0CI25 452 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 TRIM49CP0CI26 452 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 SMIM10L2AP0DMW4 78 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 SMIM10L2BP0DMW5 78 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 IGHV4-30-4P0DP06 118 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 HLA-DOBP13765 273 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 UCHL3P15374 230 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 H2AFXP16104 143 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 PSMC3P17980 439 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 NPR2P20594 1047 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 EFNA1P20827 205 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 MAGP20916 626 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 UGT1A4P22310 534 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 MAGEA6P43360 314 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 GPR1P46091 355 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 CX3CR1P49238 355 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 CRISP1P54107 249 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 PRPS1P60891 318 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 ATP6V0D1P61421 351 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 VBP1P61758 197 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 LAMTOR4Q0VGL1 99 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 RIGQ13278 110 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 GABRA6Q16445 453 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 WHAMMP3Q1A5X7 153 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 TMEM31Q5JXX7 168 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 CLVS2Q5SYC1 327 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 ZNF626Q68DY1 528 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 TIGD3Q6B0B8 471 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 TRNP1Q6NT89 227 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 ATRAIDQ6UW56 229 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 PLEKHG7Q6ZR37 379 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 APTXQ7Z2E3 356 aaKnown RBP3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 TSEN54Q7Z6J9 526 aaKnown RBP3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 DND1Q8IYX4 353 aaKnown RBP3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 CMTM1Q8IZ96 169 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 SYS1Q8N2H4 156 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 DHRSXQ8N5I4 330 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 ATP6V0D2Q8N8Y2 350 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 SNX31Q8N9S9 440 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 TMEM161BQ8NDZ6 487 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 OR2AP1Q8NGE2 309 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 CCDC26Q8TAB7 109 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 FBXO25Q8TCJ0 367 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 GPR151Q8TDV0 419 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 SORCS1Q8WY21 1168 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 NEIL2Q969S2 332 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 NTNG2Q96CW9 530 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 CCDC126Q96EE4 140 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 SDSLQ96GA7 329 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 SCMH1Q96GD3 660 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 ANKRD36BP1Q96IX9 119 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 NSL1Q96IY1 281 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 ZNF641Q96N77 438 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 SERPINB11Q96P15 392 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 XPO6Q96QU8 1125 aaKnown RBP3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 LPAR4Q99677 370 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 OVOL2Q9BRP0 275 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 NIPSNAP3BQ9BS92 247 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 SLC25A33Q9BSK2 321 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 ULBP2Q9BZM5 246 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 SLC38A1Q9H2H9 487 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 PIGUQ9H490 435 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 SAV1Q9H4B6 383 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 KIR3DX1Q9H7L2 352 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 NECAP2Q9NVZ3 263 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 KIF25Q9UIL4 384 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 DNAJC12Q9UKB3 198 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 RALYQ9UKM9 306 aaKnown RBP3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 SCML2Q9UQR0 700 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 DNAH14Q0VDD8 3507 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 CKAP5Q14008 2032 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 SCN5AQ14524 2016 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 MYH7BA7E2Y1 1941 aa3.68□□□□□ -1.82
HMGB1P21-201ENST00000502313 TRIP12Q14669 1992 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 COL1A2P08123 1366 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 DOCK5Q9H7D0 1870 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 TTC3P53804 2025 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 VPS13AQ96RL7 3174 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 A0A087WWV3 80 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 A0A0A6YYD4 124 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 TRBV9A0A0B4J1U6 114 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 EPOPA6NHQ4 379 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 MIF4GDA9UHW6 222 aaKnown RBP3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 ZNF587BE7ETH6 402 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 H3BMQ9 156 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 H3BNX3 289 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 GPR171O14626 319 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 TM9SF1O15321 606 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 TOX3O15405 576 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 SPRY3O43610 288 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 HSBP1O75506 76 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 RBMXL2O75526 392 aaKnown RBP3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 NOL4O94818 638 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 AP2A2O94973 939 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 GJB5O95377 273 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 ACTL6AO96019 429 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms