RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 B4GALNT2Q8NHY0 566 aa4.48□□□□□ -1.69
FXN-205ENST00000498653 DUSP19Q8WTR2 217 aa4.48□□□□□ -1.69
FXN-205ENST00000498653 RNF138Q8WVD3 245 aa4.48□□□□□ -1.69
FXN-205ENST00000498653 GEMIN6Q8WXD5 167 aaKnown RBP4.48□□□□□ -1.69
FXN-205ENST00000498653 CNOT9Q92600 299 aaKnown RBP4.48□□□□□ -1.69
FXN-205ENST00000498653 SLC35B4Q969S0 331 aa4.48□□□□□ -1.69
FXN-205ENST00000498653 SLC25A28Q96A46 364 aa4.48□□□□□ -1.69
FXN-205ENST00000498653 DTNBP1Q96EV8 351 aa4.48□□□□□ -1.69
FXN-205ENST00000498653 SLC47A1Q96FL8 570 aa4.48□□□□□ -1.69
FXN-205ENST00000498653 WDYHV1Q96HA8 205 aa4.48□□□□□ -1.69
FXN-205ENST00000498653 SH3YL1Q96HL8 342 aaPredicted RBP4.48□□□□□ -1.69
FXN-205ENST00000498653 PYURFQ96I23 114 aa4.48□□□□□ -1.69
FXN-205ENST00000498653 SNX18Q96RF0 628 aa4.48□□□□□ -1.69
FXN-205ENST00000498653 ARHGDIGQ99819 225 aa4.48□□□□□ -1.69
FXN-205ENST00000498653 KRTAP4-12Q9BQ66 201 aa4.48□□□□□ -1.69
FXN-205ENST00000498653 LAT2Q9GZY6 243 aa4.48□□□□□ -1.69
FXN-205ENST00000498653 GALNT9Q9HCQ5 603 aa4.48□□□□□ -1.69
FXN-205ENST00000498653 CBLN4Q9NTU7 201 aa4.48□□□□□ -1.69
FXN-205ENST00000498653 FAIMQ9NVQ4 179 aa4.48□□□□□ -1.69
FXN-205ENST00000498653 CISD1Q9NZ45 108 aaKnown RBP4.48□□□□□ -1.69
FXN-205ENST00000498653 PPP4R1LQ9P1A2 415 aa4.48□□□□□ -1.69
FXN-205ENST00000498653 CAMK2AQ9UQM7 478 aa4.48□□□□□ -1.69
FXN-205ENST00000498653 SLC9A8Q9Y2E8 581 aa4.48□□□□□ -1.69
FXN-205ENST00000498653 CARD8Q9Y2G2 431 aa4.48□□□□□ -1.69
FXN-205ENST00000498653 GRIP1Q9Y3R0 1128 aa4.48□□□□□ -1.69
FXN-205ENST00000498653 V9GYQ6 96 aa4.48□□□□□ -1.69
FXN-205ENST00000498653 IGLV3-32A0A0A0MS00 114 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 LOC390937A0A1W2PQ73 354 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 TCRBV3S1A0A5B6 114 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 DHRS12A0PJE2 317 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 CDHR4A6H8M9 788 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 CLDN24A6NM45 220 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 SHISA9B4DS77 424 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 B4DSR2 109 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 M0R3H8 397 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 AP3D1O14617 1153 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 RAMP1O60894 148 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 TRIM3O75382 744 aaPredicted RBP4.47□□□□□ -1.69
FXN-205ENST00000498653 SEC14L2O76054 403 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 NUDT14O95848 222 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 PNPP00491 289 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 CGAP01215 116 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 FABP3P05413 133 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 LINGO3P0C6S8 592 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 RAP2AP10114 183 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 UQCRBP14927 111 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 PPP3CBP16298 524 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 PGCP20142 388 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 TNFRSF1BP20333 461 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 SLC7A1P30825 629 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 IFNA8P32881 189 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 RYKP34925 604 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 OR1E2P47887 323 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 SLC6A8P48029 635 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 P2RX1P51575 399 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 CCR4P51679 360 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 GAS1P54826 345 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 SUMO3P55854 103 aaPredicted RBP4.47□□□□□ -1.69
FXN-205ENST00000498653 KRTAP10-11P60412 298 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 ACTR3P61158 418 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 COPZ1P61923 177 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 SRSF3P84103 164 aaKnown RBP4.47□□□□□ -1.69
FXN-205ENST00000498653 ZNF117Q03924 483 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 DBPQ10586 325 aaPredicted RBP4.47□□□□□ -1.69
FXN-205ENST00000498653 EPS8Q12929 822 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 BAMBIQ13145 260 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 SKP2Q13309 424 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 CBFBQ13951 182 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 CD226Q15762 336 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 NDUFAF6Q330K2 333 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 GLIPR1L2Q4G1C9 344 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 FAM209AQ5JX71 171 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 ZNF362Q5T0B9 420 aaPredicted RBP4.47□□□□□ -1.69
FXN-205ENST00000498653 FNDC7Q5VTL7 733 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 ZFP1Q6P2D0 407 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 VTCN1Q7Z7D3 282 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 RANBP3LQ86VV4 465 aaPredicted RBP4.47□□□□□ -1.69
FXN-205ENST00000498653 CYP4Z1Q86W10 505 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 PLCZ1Q86YW0 608 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 ZDHHC21Q8IVQ6 265 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 ADGRG5Q8IZF4 528 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 FAM86B1Q8N7N1 296 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 OR1J4Q8NGS1 313 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 OR5W2Q8NH69 310 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 VANGL1Q8TAA9 524 aaPredicted RBP4.47□□□□□ -1.69
FXN-205ENST00000498653 CANT1Q8WVQ1 401 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 STMN2Q93045 179 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 MARS2Q96GW9 593 aaKnown RBP4.47□□□□□ -1.69
FXN-205ENST00000498653 TMEM41AQ96HV5 264 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 ZNF597Q96LX8 424 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 JSRP1Q96MG2 331 aaPredicted RBP4.47□□□□□ -1.69
FXN-205ENST00000498653 SEPHS2Q99611 448 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 MCHR1Q99705 422 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 RTN4RQ9BZR6 473 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 KLHL4Q9C0H6 718 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 DSN1Q9H410 356 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 MAGIXQ9H6Y5 334 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 PTGES2Q9H7Z7 377 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 YY1AP1Q9H869 796 aa4.47□□□□□ -1.69
FXN-205ENST00000498653 TMEM27Q9HBJ8 222 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms