RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 LRGUKQ96M69 825 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 RBP7Q96R05 134 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 NDEL1Q9GZM8 345 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 TMCC3Q9ULS5 477 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 PRRC2AP48634 2157 aaKnown RBP11.15□□□□□ -0.62
HSPG2-213ENST00000498495 ANKRD17O75179 2603 aaKnown RBP11.15□□□□□ -0.62
HSPG2-213ENST00000498495 ALPK2Q86TB3 2170 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 TACC2O95359 2948 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 RAI1Q7Z5J4 1906 aaPredicted RBP11.14□□□□□ -0.63
HSPG2-213ENST00000498495 ATP6V1G2-DDX39BF2Z307 99 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 CDC42EP2O14613 210 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 GYG2O15488 501 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 UBOX5O94941 541 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 IGLV1-44P01699 117 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 HLA-HP01893 362 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 CECR9P0C854 216 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 CD99P14209 185 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 ATP6V1B2P21281 511 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 RRM2P31350 389 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 APOBEC3AP31941 199 aaPredicted RBP11.14□□□□□ -0.63
HSPG2-213ENST00000498495 OMPP47874 163 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 PTH2RP49190 550 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 RAB1AP62820 205 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 NAAAQ02083 359 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 CD47Q08722 323 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 NPRL3Q12980 569 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 SEC23BQ15437 767 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 GSG1Q2KHT4 349 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 LCN8Q6JVE9 175 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 ZNF544Q6NX49 715 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 MDP1Q86V88 176 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 SKA3Q8IX90 412 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 MUC15Q8N387 334 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 SLC22A24Q8N4F4 322 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 NOXO1Q8NFA2 376 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 IL17RDQ8NFM7 739 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 FNDC8Q8TC99 324 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 HDAC2Q92769 488 aaKnown RBP11.14□□□□□ -0.63
HSPG2-213ENST00000498495 POP5Q969H6 163 aaKnown RBP11.14□□□□□ -0.63
HSPG2-213ENST00000498495 CLPTM1LQ96KA5 538 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 DHRS1Q96LJ7 313 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 KATNB1Q9BVA0 655 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 GSX2Q9BZM3 304 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 ZNF701Q9NV72 531 aaPredicted RBP11.14□□□□□ -0.63
HSPG2-213ENST00000498495 TMEM38BQ9NVV0 291 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 B3GNT2Q9NY97 397 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 GRHPRQ9UBQ7 328 aa11.14□□□□□ -0.63
HSPG2-213ENST00000498495 SH3PXD2BA1X283 911 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 ZNF503-AS2A6NEH8 195 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 A6NIZ1 184 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 VSTM5A8MXK1 200 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 OVOL3O00110 214 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 MGRN1O60291 552 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 OR10H3O60404 316 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 PTP4A3O75365 173 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 KRT36O76013 467 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 UBL3O95164 117 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 NDUFB2O95178 105 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 RAB36O95755 333 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 CD8AP01732 235 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 IGHMP01871 453 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 CD14P08571 375 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 CELA3BP08861 270 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 PAX1P15863 534 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 IFNGR2P38484 337 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 CDKN1AP38936 164 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 GUCA1AP43080 201 aaPredicted RBP11.13□□□□□ -0.63
HSPG2-213ENST00000498495 PTDSS1P48651 473 aaKnown RBP11.13□□□□□ -0.63
HSPG2-213ENST00000498495 ATP5J2P56134 94 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 RAP1BP61224 184 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 RAP1AP62834 184 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 ERVK-25P63136 954 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 CHRNB3Q05901 458 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 FHL1Q13642 323 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 DNAL1Q4LDG9 190 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 Q5PR19 223 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 THEM4Q5T1C6 240 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 FAM205BPQ63HN1 556 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 PRSS57Q6UWY2 283 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 B3GLCTQ6Y288 498 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 WFDC11Q8NEX6 87 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 OR4F15Q8NGB8 312 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 ASB9Q96DX5 294 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 TSPAN32Q96QS1 320 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 KCNK17Q96T54 332 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 TRAF4Q9BUZ4 470 aaPredicted RBP11.13□□□□□ -0.63
HSPG2-213ENST00000498495 ALG12Q9BV10 488 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 GRIP2Q9C0E4 1043 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 KCNN2Q9H2S1 579 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 HEATR1Q9H583 2144 aaKnown RBP11.13□□□□□ -0.63
HSPG2-213ENST00000498495 DENND2DQ9H6A0 471 aaPredicted RBP11.13□□□□□ -0.63
HSPG2-213ENST00000498495 RNF121Q9H920 327 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 CBLN4Q9NTU7 201 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 SIGLEC7Q9Y286 467 aa11.13□□□□□ -0.63
HSPG2-213ENST00000498495 TCRBV5S2A0A599 114 aa11.12□□□□□ -0.63
HSPG2-213ENST00000498495 UNC119BA6NIH7 251 aa11.12□□□□□ -0.63
HSPG2-213ENST00000498495 PATE4P0C8F1 98 aa11.12□□□□□ -0.63
HSPG2-213ENST00000498495 BMP4P12644 408 aa11.12□□□□□ -0.63
HSPG2-213ENST00000498495 GIPRP48546 466 aa11.12□□□□□ -0.63
HSPG2-213ENST00000498495 ZNF133P52736 654 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms