RNA–Protein interactions for RNA: ENST00000498007.1

HLA-B-255, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,087 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-255ENST00000498007 ARHGEF9O43307 516 aa17.32■□□□□ 0.36
HLA-B-255ENST00000498007 DHHO43323 396 aa17.32■□□□□ 0.36
HLA-B-255ENST00000498007 SLC2A10O95528 541 aa17.32■□□□□ 0.36
HLA-B-255ENST00000498007 WNT11O96014 354 aa17.32■□□□□ 0.36
HLA-B-255ENST00000498007 SLC6A6P31641 620 aa17.32■□□□□ 0.36
HLA-B-255ENST00000498007 NR1H2P55055 460 aa17.32■□□□□ 0.36
HLA-B-255ENST00000498007 KRR1Q13601 381 aaKnown RBP17.32■□□□□ 0.36
HLA-B-255ENST00000498007 GK3PQ14409 553 aa17.32■□□□□ 0.36
HLA-B-255ENST00000498007 KPNB1Q14974 876 aaKnown RBP17.32■□□□□ 0.36
HLA-B-255ENST00000498007 RFX4Q33E94 735 aa17.32■□□□□ 0.36
HLA-B-255ENST00000498007 MESTQ5EB52 335 aa17.32■□□□□ 0.36
HLA-B-255ENST00000498007 LRFN4Q6PJG9 635 aa17.32■□□□□ 0.36
HLA-B-255ENST00000498007 DPY19L2P2Q6ZN68 376 aa17.32■□□□□ 0.36
HLA-B-255ENST00000498007 SSX8Q7RTT4 187 aa17.32■□□□□ 0.36
HLA-B-255ENST00000498007 FAM122BQ7Z309 247 aa17.32■□□□□ 0.36
HLA-B-255ENST00000498007 ARIH2OSQ8N7S6 290 aa17.32■□□□□ 0.36
HLA-B-255ENST00000498007 GIPC3Q8TF64 312 aa17.32■□□□□ 0.36
HLA-B-255ENST00000498007 SAMD8Q96LT4 415 aa17.32■□□□□ 0.36
HLA-B-255ENST00000498007 KCNK17Q96T54 332 aa17.32■□□□□ 0.36
HLA-B-255ENST00000498007 ALG12Q9BV10 488 aa17.32■□□□□ 0.36
HLA-B-255ENST00000498007 ESRP2Q9H6T0 727 aaKnown RBP17.32■□□□□ 0.36
HLA-B-255ENST00000498007 EGLN3Q9H6Z9 239 aa17.32■□□□□ 0.36
HLA-B-255ENST00000498007 NRIP3Q9NQ35 241 aa17.32■□□□□ 0.36
HLA-B-255ENST00000498007 PDP1Q9P0J1 537 aaPredicted RBP17.32■□□□□ 0.36
HLA-B-255ENST00000498007 IER3IP1Q9Y5U9 82 aa17.32■□□□□ 0.36
HLA-B-255ENST00000498007 CSMD2Q7Z408 3487 aa17.31■□□□□ 0.36
HLA-B-255ENST00000498007 A0A1W2PPR1 153 aa17.31■□□□□ 0.36
HLA-B-255ENST00000498007 SOCS2O14508 198 aa17.31■□□□□ 0.36
HLA-B-255ENST00000498007 DEAF1O75398 565 aaPredicted RBP17.31■□□□□ 0.36
HLA-B-255ENST00000498007 NR2C1P13056 603 aa17.31■□□□□ 0.36
HLA-B-255ENST00000498007 LOXP28300 417 aaPredicted RBP17.31■□□□□ 0.36
HLA-B-255ENST00000498007 SDHAP31040 664 aa17.31■□□□□ 0.36
HLA-B-255ENST00000498007 ZNF84P51523 738 aa17.31■□□□□ 0.36
HLA-B-255ENST00000498007 RPS6KA3P51812 740 aa17.31■□□□□ 0.36
HLA-B-255ENST00000498007 BSPH1Q075Z2 132 aa17.31■□□□□ 0.36
HLA-B-255ENST00000498007 HIST3H3Q16695 136 aa17.31■□□□□ 0.36
HLA-B-255ENST00000498007 CLEC12AQ5QGZ9 265 aa17.31■□□□□ 0.36
HLA-B-255ENST00000498007 KLHL17Q6TDP4 642 aa17.31■□□□□ 0.36
HLA-B-255ENST00000498007 HS3ST5Q8IZT8 346 aa17.31■□□□□ 0.36
HLA-B-255ENST00000498007 MAGEE2Q8TD90 523 aaPredicted RBP17.31■□□□□ 0.36
HLA-B-255ENST00000498007 NSMAFQ92636 917 aa17.31■□□□□ 0.36
HLA-B-255ENST00000498007 NRGNQ92686 78 aa17.31■□□□□ 0.36
HLA-B-255ENST00000498007 HTRA1Q92743 480 aa17.31■□□□□ 0.36
HLA-B-255ENST00000498007 RAB3IPQ96QF0 476 aaPredicted RBP17.31■□□□□ 0.36
HLA-B-255ENST00000498007 IFT27Q9BW83 186 aa17.31■□□□□ 0.36
HLA-B-255ENST00000498007 OBP2BQ9NPH6 170 aa17.31■□□□□ 0.36
HLA-B-255ENST00000498007 MGAT4BQ9UQ53 548 aa17.31■□□□□ 0.36
HLA-B-255ENST00000498007 AP4S1Q9Y587 144 aa17.31■□□□□ 0.36
HLA-B-255ENST00000498007 MAGED1Q9Y5V3 778 aaPredicted RBP17.31■□□□□ 0.36
HLA-B-255ENST00000498007 CDH10Q9Y6N8 788 aa17.31■□□□□ 0.36
HLA-B-255ENST00000498007 ABCA12Q86UK0 2595 aa17.31■□□□□ 0.36
HLA-B-255ENST00000498007 PRR14LQ5THK1 2151 aa17.3■□□□□ 0.36
HLA-B-255ENST00000498007 ALPK2Q86TB3 2170 aa17.3■□□□□ 0.36
HLA-B-255ENST00000498007 TACC2O95359 2948 aa17.3■□□□□ 0.36
HLA-B-255ENST00000498007 ARPC4-TTLL3A0A0A6YYG9 625 aa17.3■□□□□ 0.36
HLA-B-255ENST00000498007 SOX14O95416 240 aa17.3■□□□□ 0.36
HLA-B-255ENST00000498007 NCMAPQ5T1S8 102 aa17.3■□□□□ 0.36
HLA-B-255ENST00000498007 GPR139Q6DWJ6 353 aa17.3■□□□□ 0.36
HLA-B-255ENST00000498007 YTHDF3Q7Z739 585 aaKnown RBP17.3■□□□□ 0.36
HLA-B-255ENST00000498007 OR52L1Q8NGH7 329 aa17.3■□□□□ 0.36
HLA-B-255ENST00000498007 BOD1Q96IK1 185 aa17.3■□□□□ 0.36
HLA-B-255ENST00000498007 ERMAPQ96PL5 475 aaPredicted RBP17.3■□□□□ 0.36
HLA-B-255ENST00000498007 FEVQ99581 238 aa17.3■□□□□ 0.36
HLA-B-255ENST00000498007 NIPSNAP1Q9BPW8 284 aa17.3■□□□□ 0.36
HLA-B-255ENST00000498007 DGCR6LQ9BY27 220 aa17.3■□□□□ 0.36
HLA-B-255ENST00000498007 TBC1D23Q9NUY8 699 aa17.3■□□□□ 0.36
HLA-B-255ENST00000498007 ARMC1Q9NVT9 282 aa17.3■□□□□ 0.36
HLA-B-255ENST00000498007 ITPR2Q14571 2701 aa17.3■□□□□ 0.36
HLA-B-255ENST00000498007 IGKV1D-43A0A0B4J1Z2 117 aa17.29■□□□□ 0.36
HLA-B-255ENST00000498007 ZNF503-AS2A6NEH8 195 aa17.29■□□□□ 0.36
HLA-B-255ENST00000498007 ARRDC5A6NEK1 342 aa17.29■□□□□ 0.36
HLA-B-255ENST00000498007 DPRXA6NFQ7 191 aa17.29■□□□□ 0.36
HLA-B-255ENST00000498007 PLAUP00749 431 aa17.29■□□□□ 0.36
HLA-B-255ENST00000498007 CD3EP07766 207 aa17.29■□□□□ 0.36
HLA-B-255ENST00000498007 GSTM3P21266 225 aa17.29■□□□□ 0.36
HLA-B-255ENST00000498007 ACTR3P61158 418 aa17.29■□□□□ 0.36
HLA-B-255ENST00000498007 ATP6AP1Q15904 470 aa17.29■□□□□ 0.36
HLA-B-255ENST00000498007 C10orf128Q5T292 105 aa17.29■□□□□ 0.36
HLA-B-255ENST00000498007 RPL13AP3Q6NVV1 102 aa17.29■□□□□ 0.36
HLA-B-255ENST00000498007 ADAM5Q6NVV9 412 aa17.29■□□□□ 0.36
HLA-B-255ENST00000498007 TMEM108Q6UXF1 575 aa17.29■□□□□ 0.36
HLA-B-255ENST00000498007 ZNF704Q6ZNC4 412 aaPredicted RBP17.29■□□□□ 0.36
HLA-B-255ENST00000498007 RASSF6Q6ZTQ3 369 aa17.29■□□□□ 0.36
HLA-B-255ENST00000498007 PYDC1Q8WXC3 89 aa17.29■□□□□ 0.36
HLA-B-255ENST00000498007 NMD3Q96D46 503 aaKnown RBP17.29■□□□□ 0.36
HLA-B-255ENST00000498007 DUS3LQ96G46 650 aaKnown RBP17.29■□□□□ 0.36
HLA-B-255ENST00000498007 RBP7Q96R05 134 aa17.29■□□□□ 0.36
HLA-B-255ENST00000498007 PLA2G12AQ9BZM1 189 aa17.29■□□□□ 0.36
HLA-B-255ENST00000498007 UBTD1Q9HAC8 227 aa17.29■□□□□ 0.36
HLA-B-255ENST00000498007 TMEM38BQ9NVV0 291 aa17.29■□□□□ 0.36
HLA-B-255ENST00000498007 RNF115Q9Y4L5 304 aa17.29■□□□□ 0.36
HLA-B-255ENST00000498007 ABCD4O14678 606 aa17.28■□□□□ 0.36
HLA-B-255ENST00000498007 HLA-HP01893 362 aa17.28■□□□□ 0.36
HLA-B-255ENST00000498007 IGFBP1P08833 259 aaPredicted RBP17.28■□□□□ 0.36
HLA-B-255ENST00000498007 CD79AP11912 226 aa17.28■□□□□ 0.36
HLA-B-255ENST00000498007 FASP25445 335 aa17.28■□□□□ 0.36
HLA-B-255ENST00000498007 NOS3P29474 1203 aa17.28■□□□□ 0.36
HLA-B-255ENST00000498007 ARHGDIAP52565 204 aa17.28■□□□□ 0.36
HLA-B-255ENST00000498007 GABPB1Q06547 395 aaPredicted RBP17.28■□□□□ 0.36
HLA-B-255ENST00000498007 SPOCK1Q08629 439 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms