RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 EDF1O60869 148 aaKnown RBP10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 LILRA1O75019 489 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 LYPD3O95274 346 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 PTHP01270 115 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 IGHG1P01857 330 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 SERPINA5P05154 406 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 CLRN1P58418 232 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 SELENOVP59797 346 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 PRR20EP86478 221 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 PRR20CP86479 221 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 PRR20DP86480 221 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 PRR20BP86481 221 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 PRR20AP86496 221 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 RIN1Q13671 783 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 MELKQ14680 651 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 FXNQ16595 210 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 VMACQ2NL98 169 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 CR1LQ2VPA4 569 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 TMEM53Q6P2H8 277 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 HDDC2Q7Z4H3 204 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 NANOGNBQ7Z5D8 188 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 RBM45Q8IUH3 476 aaKnown RBP10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 WDFY1Q8IWB7 410 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 LRRC17Q8N6Y2 441 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 LINC01356Q8N9X3 169 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 OR4D11Q8NGI4 311 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 TAMM41Q96BW9 452 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 ECSITQ9BQ95 431 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 C1orf198Q9H425 327 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 RNF121Q9H920 327 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 MRGBPQ9NV56 204 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 TMEM38BQ9NVV0 291 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 ARGLU1Q9NWB6 273 aaPredicted RBP10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 DUSP13Q9UII6 198 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 GPR160Q9UJ42 338 aa10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 ZNF346Q9UL40 294 aaKnown RBP10.12□□□□□ -0.79
NUDCD3-211ENST00000497978 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 MCIDASD6RGH6 385 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 LYNX1G3V0Z9 82 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 BLOC1S5-TXNDC5H3BN57 136 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 IFNA14P01570 189 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 THY1P04216 161 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 IGFBP1P08833 259 aaPredicted RBP10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 QDPRP09417 244 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 ASAH2BP0C7U1 165 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 PATE4P0C8F1 98 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 PGA4P0DJD7 388 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 PGA3P0DJD8 388 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 LYNX1P0DP58 116 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 PCMT1P22061 227 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 ALDH3B1P43353 468 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 ZNF84P51523 738 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 TAS2R41P59536 307 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 SLC36A2Q495M3 483 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 MMEL1Q495T6 779 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 LIPNQ5VXI9 398 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 RGS7BPQ6MZT1 257 aaPredicted RBP10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 NANOGP8Q6NSW7 305 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 LRFN4Q6PJG9 635 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 CCDC80Q76M96 950 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 SLC30A7Q8NEW0 376 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 OR1J2Q8NGS2 313 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 RDH5Q92781 318 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 SH3GL3Q99963 347 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 SOX7Q9BT81 388 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 ZNF426Q9BUY5 554 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 POLR2J2Q9GZM3 115 aaKnown RBP10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 POLR2J3Q9H1A7 115 aaKnown RBP10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 LRMDAQ9H2I8 198 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 VIPAS39Q9H9C1 493 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 NANOGQ9H9S0 305 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 CDH20Q9HBT6 801 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 STX18Q9P2W9 335 aaKnown RBP10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 TMEFF2Q9UIK5 374 aaPredicted RBP10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 BAG5Q9UL15 447 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 FZR1Q9UM11 496 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 SH3GLB1Q9Y371 365 aa10.11□□□□□ -0.79
NUDCD3-211ENST00000497978 IQCMA0A1B0GVH7 501 aa10.1□□□□□ -0.79
NUDCD3-211ENST00000497978 CENPBD1B2RD01 187 aa10.1□□□□□ -0.79
NUDCD3-211ENST00000497978 J3QL48 77 aa10.1□□□□□ -0.79
NUDCD3-211ENST00000497978 MGRN1O60291 552 aa10.1□□□□□ -0.79
NUDCD3-211ENST00000497978 NPPAP01160 153 aa10.1□□□□□ -0.79
NUDCD3-211ENST00000497978 MT-ND1P03886 318 aa10.1□□□□□ -0.79
NUDCD3-211ENST00000497978 TCN1P20061 433 aaPredicted RBP10.1□□□□□ -0.79
NUDCD3-211ENST00000497978 ACHEP22303 614 aa10.1□□□□□ -0.79
NUDCD3-211ENST00000497978 IL2RGP31785 369 aa10.1□□□□□ -0.79
NUDCD3-211ENST00000497978 SRP14P37108 136 aaKnown RBP10.1□□□□□ -0.79
NUDCD3-211ENST00000497978 RBM34P42696 430 aaKnown RBP10.1□□□□□ -0.79
NUDCD3-211ENST00000497978 GPR6P46095 362 aaPredicted RBP10.1□□□□□ -0.79
NUDCD3-211ENST00000497978 GZMMP51124 257 aa10.1□□□□□ -0.79
NUDCD3-211ENST00000497978 DAP3P51398 398 aaKnown RBP10.1□□□□□ -0.79
NUDCD3-211ENST00000497978 CDH15P55291 814 aa10.1□□□□□ -0.79
NUDCD3-211ENST00000497978 PLP2Q04941 152 aa10.1□□□□□ -0.79
NUDCD3-211ENST00000497978 CCNIQ14094 377 aa10.1□□□□□ -0.79
NUDCD3-211ENST00000497978 TRIP10Q15642 601 aa10.1□□□□□ -0.79
NUDCD3-211ENST00000497978 NKPD1Q17RQ9 610 aa10.1□□□□□ -0.79
NUDCD3-211ENST00000497978 MSMPQ1L6U9 139 aa10.1□□□□□ -0.79
NUDCD3-211ENST00000497978 TBC1D28Q2M2D7 210 aa10.1□□□□□ -0.79
NUDCD3-211ENST00000497978 KRTAP24-1Q3LI83 254 aa10.1□□□□□ -0.79
NUDCD3-211ENST00000497978 NRN1LQ496H8 165 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms