RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 TRAM1L1Q8N609 369 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 OR51A4Q8NGJ6 313 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 RNASE11Q8TAA1 199 aaKnown RBP9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 FGF11Q92914 225 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 MIB2Q96AX9 1013 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 ALG14Q96F25 216 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 COMMD4Q9H0A8 199 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 SPACA1Q9HBV2 294 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 KCNK6Q9Y257 313 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 MYO15AQ9UKN7 3530 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 IGLV3-16A0A075B6K0 115 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 A0A1W2PPE2 198 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 METTL12A8MUP2 240 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 RNASEK-C17orf49H0YIS7 233 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 H7C417 338 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 HOXB5P09067 269 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 OR13C7P0DN81 318 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 NR2C1P13056 603 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 EIF2S3P41091 472 aaKnown RBP9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 PCBP4P57723 403 aaKnown RBP9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 IKZF1Q13422 519 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 IRF5Q13568 498 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 PGAP1Q75T13 922 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 EIF4E3Q8N5X7 224 aaKnown RBP9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 AVL9Q8NBF6 648 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 KISS1RQ969F8 398 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 LCORQ96JN0 433 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 TCEAL7Q9BRU2 100 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 TOLLIPQ9H0E2 274 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 MTFP1Q9UDX5 166 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 PAPPA2Q9BXP8 1791 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 SERTM1A2A2V5 107 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 PMS2P1A4D2B8 440 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 C2orf74A8MZ97 194 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 NME2P1O60361 137 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 PMS2P2O95744 297 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 GPANK1O95872 356 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 PCCBP05166 539 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 RHOP08100 348 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 HMGA1P17096 107 aaKnown RBP9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 SERPINF1P36955 418 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 PRLHRP49683 370 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 PPP2CBP62714 309 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 PPP2CAP67775 309 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 DHODHQ02127 395 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 DUSP5Q16690 384 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 ALG10BQ5I7T1 473 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 DHRS7BQ6IAN0 325 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 TMPPEQ6ZT21 453 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 GAREM2Q75VX8 874 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 RD3Q7Z3Z2 195 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 AMZ2Q86W34 360 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 IP6K3Q96PC2 410 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 RSPH9Q9H1X1 276 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 TAS2R8Q9NYW2 309 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 AMDHD2Q9Y303 409 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 SULT2B1O00204 365 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 PRKNO60260 465 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 ADH1AP07327 375 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 CD1CP29017 333 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 SPOCK1Q08629 439 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 PPP1R1AQ13522 171 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 EXOSC7Q15024 291 aaKnown RBP9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 DEFB134Q4QY38 66 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 C4orf17Q53FE4 359 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 ZNF805Q5CZA5 627 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 LRRC69Q6ZNQ3 347 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 SLC36A1Q7Z2H8 476 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 DEFB128Q7Z7B8 93 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 OR6N1Q8NGY5 312 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 NRIP2Q9BQI9 281 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 CWH43Q9H720 699 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 MRPL17Q9NRX2 175 aaKnown RBP9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 RXFP3Q9NSD7 469 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 LAMP5Q9UJQ1 280 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 PCDHGA1Q9Y5H4 931 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 SCN8AQ9UQD0 1980 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 BHLHE40O14503 412 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 CDC40O60508 579 aaKnown RBP eCLIP9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 F13BP05160 661 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 ZNF44P15621 663 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 GALP22466 123 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 GABRA3P34903 492 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 MRPS10P82664 201 aaKnown RBP9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 PJVKQ0ZLH3 352 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 INPP5JQ15735 1006 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 ZNF124Q15973 351 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 DMRTC1Q5HYR2 192 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 PAPD4Q6PIY7 484 aaKnown RBP9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 ZNF561Q8N587 486 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 OR7G2Q8NG99 324 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 OR4A4PQ8NGN8 299 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 ZPLD1Q8TCW7 415 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 PPP1R14AQ96A00 147 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 RAB3CQ96E17 227 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 PHB2Q99623 299 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 SGPP1Q9BX95 441 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 ACTRT3Q9BYD9 372 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 SEMA6CQ9H3T2 930 aa9.69□□□□□ -0.86
TRAPPC12-223ENST00000497597 INPP5EQ9NRR6 644 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms