RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 TMEM41AQ96HV5 264 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 PTCHD1Q96NR3 888 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 ELF4Q99607 663 aaPredicted RBP11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 SSX3Q99909 188 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 PRSS27Q9BQR3 290 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 MMP26Q9NRE1 261 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 TMEM72A0PK05 275 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 TSPAN11A1L157 253 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 H7C1Q1 480 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 PEX12O00623 359 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 XRCC3O43542 346 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 EOMESO95936 686 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 OR2T7P0C7T2 308 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 NDUFS1P28331 727 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 CD1CP29017 333 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 S100A2P29034 98 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 IL13RA1P78552 427 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 MRPL2Q5T653 305 aaKnown RBP11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 LIPNQ5VXI9 398 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 OR2T27Q8NH04 317 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 FGF13Q92913 245 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 TMEM106AQ96A25 262 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 TRMT2BQ96GJ1 504 aaKnown RBP11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 IP6K3Q96PC2 410 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 TSSK2Q96PF2 358 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 SLC6A7Q99884 636 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 EDEM2Q9BV94 578 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 SYT4Q9H2B2 425 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 KIAA0100Q14667 2235 aaKnown RBP11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 AIFM1O95831 613 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 INHAP05111 366 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 RAB6AP20340 208 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 LSSP48449 732 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 CASP6P55212 293 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 FAM220AQ7Z4H9 259 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 OR5AK2Q8NH90 309 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 SOCS4Q8WXH5 440 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 SEBOXQ9HB31 216 aaPredicted RBP11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 SLC23A2Q9UGH3 650 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 FITM1A5D6W6 292 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 C4orf47A7E2U8 309 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 CTAG2O75638 210 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 CYB5AP00167 134 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 CALCBP10092 127 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 PRKAR1BP31321 381 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 HSD17B2P37059 387 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 VASPP50552 380 aaPredicted RBP11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 FAM111BQ6SJ93 734 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 ZNF813Q6ZN06 617 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 OR51A4Q8NGJ6 313 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 ZPLD1Q8TCW7 415 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 CD300LFQ8TDQ1 290 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 C15orf40Q8WUR7 153 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 TFGQ92734 400 aaPredicted RBP11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 PIK3IP1Q96FE7 263 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 SUCNR1Q9BXA5 334 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 SDHAF3Q9NRP4 125 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 F5P12259 2224 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 LAP3P28838 519 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 GPR1P46091 355 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 MECP2P51608 486 aaKnown RBP11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 NDUFA6P56556 154 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 FKBP1BP68106 108 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 PPP1R1AQ13522 171 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 CDNFQ49AH0 187 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 NKAIN2Q5VXU1 208 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 ST7LQ8TDW4 575 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 ROBO4Q8WZ75 1007 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 DNAJA3Q96EY1 480 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 PRSS16Q9NQE7 514 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 PRR13Q9NZ81 148 aa11.91□□□□□ -0.5
GAPVD1-220ENST00000497580 TVP23AA6NH52 213 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 SLC6A6P31641 620 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 P2RY4P51582 365 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 CXADRP78310 365 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 ZNF345Q14585 488 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 PLPP7Q8NBV4 271 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 TMPRSS5Q9H3S3 457 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 RGCCQ9H4X1 137 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 FBXO34Q9NWN3 711 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 METTL1Q9UBP6 276 aaKnown RBP11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 ZNF780BQ9Y6R6 833 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 ATG2BQ96BY7 2078 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 C9JQL5 133 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 DOK2O60496 412 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 PMP2P02689 132 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 CYBAP13498 195 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 LAG3P18627 525 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 GAS6Q14393 721 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 AWAT1Q58HT5 328 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 TMEM150AQ86TG1 271 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 C15orf54Q8N8G6 183 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 MAFIPQ8WZ33 124 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 RASD2Q96D21 266 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 RAB3CQ96E17 227 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 ADAD1Q96M93 576 aaKnown RBP11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 CMTM3Q96MX0 182 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 DMRT1Q9Y5R6 373 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 PRR32B1ATL7 298 aa11.9□□□□□ -0.5
GAPVD1-220ENST00000497580 ZNF736B4DX44 427 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms