RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 BEND6Q5SZJ8 279 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-212ENST00000496458 CELF3Q5SZQ8 465 aaKnown RBP3.74□□□□□ -1.81
SF3B1-212ENST00000496458 MEDAGQ5VYS4 303 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 SLC25A25Q6KCM7 469 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 FAM71F2Q6NXP2 309 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 VRK2Q86Y07 508 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 ITPRIPQ8IWB1 547 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 ARHGAP18Q8N392 663 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 RNF10Q8N5U6 811 aaKnown RBP3.74□□□□□ -1.81
SF3B1-212ENST00000496458 OR4D5Q8NGN0 318 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 NDNFQ8TB73 568 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 NANPQ8TBE9 248 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 MARCH1Q8TCQ1 289 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 DTX3LQ8TDB6 740 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 MAIP1Q8WWC4 291 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 IFT81Q8WYA0 676 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 MYLPFQ96A32 169 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 PELI1Q96FA3 418 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 RIT2Q99578 217 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 C20orf24Q9BUV8 137 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 SHANK3Q9BYB0 1731 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 NARFLQ9H6Q4 476 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 SMYD3Q9H7B4 428 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 VCX3AQ9NNX9 186 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 DMAP1Q9NPF5 467 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-212ENST00000496458 EXOSC3Q9NQT5 275 aaKnown RBP3.74□□□□□ -1.81
SF3B1-212ENST00000496458 C20orf96Q9NUD7 363 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-212ENST00000496458 AHSPQ9NZD4 102 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 STOX2Q9P2F5 926 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-212ENST00000496458 GNG12Q9UBI6 72 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 CTSFQ9UBX1 484 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 PDE10AQ9Y233 779 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 BTAF1O14981 1849 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 DOT1LQ8TEK3 1739 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 TNS1Q9HBL0 1735 aaKnown RBP3.73□□□□□ -1.81
SF3B1-212ENST00000496458 BCL9O00512 1426 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 TRBV7-9A0A0J9YWB2 115 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 A0A1W2PNV4 684 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 H0YL77 283 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 RS1O15537 224 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 ZNF861PO60384 105 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 IGHV3-23P01764 117 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 ERCC1P07992 297 aaPredicted RBP3.73□□□□□ -1.81
SF3B1-212ENST00000496458 HOXC4P09017 264 aaPredicted RBP3.73□□□□□ -1.81
SF3B1-212ENST00000496458 SLC35G4P0C7Q5 338 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 GSTT2P0CG29 244 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 GSTT2BP0CG30 244 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 ETS2P15036 469 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 SDC1P18827 310 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 GSTM3P21266 225 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 TBXA2RP21731 343 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 UGT1A5P35504 534 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 CRYBB2P43320 205 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 SERPINB8P50452 374 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 GNB2P62879 340 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 BASP1P80723 227 aaKnown RBP3.73□□□□□ -1.81
SF3B1-212ENST00000496458 MRPS6P82932 125 aaKnown RBP3.73□□□□□ -1.81
SF3B1-212ENST00000496458 SBK1Q52WX2 424 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 PDZK1Q5T2W1 519 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 TTC23LQ6PF05 361 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 KCNIP4Q6PIL6 250 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 TFAP2EQ6VUC0 442 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 TMEM184AQ6ZMB5 413 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 C3orf62Q6ZUJ4 267 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 CCDC121Q6ZUS5 278 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 H2BFWTQ7Z2G1 175 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 GABRG1Q8N1C3 465 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 CLDN19Q8N6F1 224 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 OR2L3Q8NG85 312 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 OR7G2Q8NG99 324 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 ANGPTL6Q8NI99 470 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 ZNF596Q8TC21 504 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 LRRC20Q8TCA0 184 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 CCDC12Q8WUD4 166 aaPredicted RBP3.73□□□□□ -1.81
SF3B1-212ENST00000496458 ARNTL2Q8WYA1 636 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 C10orf35Q96D05 121 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 SNF8Q96H20 258 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 CYTH2Q99418 400 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 COPS8Q99627 209 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 ACBD6Q9BR61 282 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 TMEM175Q9BSA9 504 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 YIPF3Q9GZM5 350 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 OR52A5Q9H2C5 316 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 RHBGQ9H310 441 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 LRRN3Q9H3W5 708 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 RHOJQ9H4E5 214 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 ELOVL6Q9H5J4 265 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 LYRM4Q9HD34 91 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 NRBP2Q9NSY0 501 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 FKBP14Q9NWM8 211 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 RASD1Q9Y272 281 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 TIMM22Q9Y584 194 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 PKD1L3Q7Z443 1732 aa3.73□□□□□ -1.81
SF3B1-212ENST00000496458 DLG5Q8TDM6 1919 aa3.72□□□□□ -1.81
SF3B1-212ENST00000496458 A0A1W2PPE3 182 aa3.72□□□□□ -1.81
SF3B1-212ENST00000496458 B4DXG7 233 aa3.72□□□□□ -1.81
SF3B1-212ENST00000496458 EMC8O43402 210 aa3.72□□□□□ -1.81
SF3B1-212ENST00000496458 CDK14O94921 469 aa3.72□□□□□ -1.81
SF3B1-212ENST00000496458 TNNI1P19237 187 aa3.72□□□□□ -1.81
SF3B1-212ENST00000496458 LCN1P31025 176 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms