RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 ANK3Q12955 4377 aaKnown RBP20.95■□□□□ 0.94
HLA-C-209ENST00000495835 CHD3Q12873 2000 aaKnown RBP20.94■□□□□ 0.94
HLA-C-209ENST00000495835 LOC390937A0A1W2PQ73 354 aa20.94■□□□□ 0.94
HLA-C-209ENST00000495835 MCIDASD6RGH6 385 aa20.94■□□□□ 0.94
HLA-C-209ENST00000495835 hCG_2039718K7EN88 272 aa20.94■□□□□ 0.94
HLA-C-209ENST00000495835 SHOX2O60902 331 aaPredicted RBP20.94■□□□□ 0.94
HLA-C-209ENST00000495835 IFNW1P05000 195 aa20.94■□□□□ 0.94
HLA-C-209ENST00000495835 SERPINA5P05154 406 aa20.94■□□□□ 0.94
HLA-C-209ENST00000495835 QDPRP09417 244 aa20.94■□□□□ 0.94
HLA-C-209ENST00000495835 NR2C1P13056 603 aa20.94■□□□□ 0.94
HLA-C-209ENST00000495835 GLRXP35754 106 aa20.94■□□□□ 0.94
HLA-C-209ENST00000495835 GIPRP48546 466 aa20.94■□□□□ 0.94
HLA-C-209ENST00000495835 PTDSS1P48651 473 aaKnown RBP20.94■□□□□ 0.94
HLA-C-209ENST00000495835 VLDLRP98155 873 aa20.94■□□□□ 0.94
HLA-C-209ENST00000495835 PIGFQ07326 219 aa20.94■□□□□ 0.94
HLA-C-209ENST00000495835 SNTB2Q13425 540 aaKnown RBP20.94■□□□□ 0.94
HLA-C-209ENST00000495835 ZNF540Q8NDQ6 660 aa20.94■□□□□ 0.94
HLA-C-209ENST00000495835 NEU4Q8WWR8 484 aaPredicted RBP20.94■□□□□ 0.94
HLA-C-209ENST00000495835 ASB10Q8WXI3 467 aa20.94■□□□□ 0.94
HLA-C-209ENST00000495835 C1orf198Q9H425 327 aa20.94■□□□□ 0.94
HLA-C-209ENST00000495835 HIF3AQ9Y2N7 669 aa20.94■□□□□ 0.94
HLA-C-209ENST00000495835 TMEM129A0AVI4 362 aa20.93■□□□□ 0.94
HLA-C-209ENST00000495835 VWC2LB2RUY7 222 aa20.93■□□□□ 0.94
HLA-C-209ENST00000495835 CXCR6O00574 342 aa20.93■□□□□ 0.94
HLA-C-209ENST00000495835 F13BP05160 661 aa20.93■□□□□ 0.94
HLA-C-209ENST00000495835 ACADSP16219 412 aa20.93■□□□□ 0.94
HLA-C-209ENST00000495835 USF1P22415 310 aaPredicted RBP20.93■□□□□ 0.94
HLA-C-209ENST00000495835 LSP1P33241 339 aa20.93■□□□□ 0.94
HLA-C-209ENST00000495835 ZNF84P51523 738 aa20.93■□□□□ 0.94
HLA-C-209ENST00000495835 RPS23P62266 143 aaKnown RBP20.93■□□□□ 0.94
HLA-C-209ENST00000495835 TMEM249Q2WGJ8 235 aa20.93■□□□□ 0.94
HLA-C-209ENST00000495835 CBLL1Q75N03 491 aa20.93■□□□□ 0.94
HLA-C-209ENST00000495835 SPATA21Q7Z572 469 aa20.93■□□□□ 0.94
HLA-C-209ENST00000495835 RNF113BQ8IZP6 322 aaKnown RBP20.93■□□□□ 0.94
HLA-C-209ENST00000495835 OFCC1Q8IZS5 231 aa20.93■□□□□ 0.94
HLA-C-209ENST00000495835 NOXO1Q8NFA2 376 aa20.93■□□□□ 0.94
HLA-C-209ENST00000495835 GEMIN6Q8WXD5 167 aaKnown RBP20.93■□□□□ 0.94
HLA-C-209ENST00000495835 MCHR2Q969V1 340 aa20.93■□□□□ 0.94
HLA-C-209ENST00000495835 BPIFA2Q96DR5 249 aa20.93■□□□□ 0.94
HLA-C-209ENST00000495835 MS4A3Q96HJ5 214 aa20.93■□□□□ 0.94
HLA-C-209ENST00000495835 SMURF2Q9HAU4 748 aa20.93■□□□□ 0.94
HLA-C-209ENST00000495835 NME4O00746 187 aa20.92■□□□□ 0.94
HLA-C-209ENST00000495835 GSTA4O15217 222 aa20.92■□□□□ 0.94
HLA-C-209ENST00000495835 PTHP01270 115 aa20.92■□□□□ 0.94
HLA-C-209ENST00000495835 AQP2P41181 271 aa20.92■□□□□ 0.94
HLA-C-209ENST00000495835 SLC7A2P52569 658 aa20.92■□□□□ 0.94
HLA-C-209ENST00000495835 GALK2Q01415 458 aa20.92■□□□□ 0.94
HLA-C-209ENST00000495835 C10orf128Q5T292 105 aa20.92■□□□□ 0.94
HLA-C-209ENST00000495835 FNDC8Q8TC99 324 aa20.92■□□□□ 0.94
HLA-C-209ENST00000495835 PIMREGQ9BSJ6 248 aa20.92■□□□□ 0.94
HLA-C-209ENST00000495835 FNDC11Q9BVV2 318 aa20.92■□□□□ 0.94
HLA-C-209ENST00000495835 TXNIPQ9H3M7 391 aa20.92■□□□□ 0.94
HLA-C-209ENST00000495835 SLC22A23A1A5C7 686 aa20.91■□□□□ 0.94
HLA-C-209ENST00000495835 GMNCA6NCL1 334 aa20.91■□□□□ 0.94
HLA-C-209ENST00000495835 GPRIN2O60269 458 aa20.91■□□□□ 0.94
HLA-C-209ENST00000495835 TRMUO75648 421 aaKnown RBP20.91■□□□□ 0.94
HLA-C-209ENST00000495835 PRDX6P30041 224 aa20.91■□□□□ 0.94
HLA-C-209ENST00000495835 TRAM2Q15035 370 aa20.91■□□□□ 0.94
HLA-C-209ENST00000495835 SLC36A2Q495M3 483 aa20.91■□□□□ 0.94
HLA-C-209ENST00000495835 IFI44LQ53G44 452 aa20.91■□□□□ 0.94
HLA-C-209ENST00000495835 ARMC4Q5T2S8 1044 aa20.91■□□□□ 0.94
HLA-C-209ENST00000495835 KRT80Q6KB66 452 aa20.91■□□□□ 0.94
HLA-C-209ENST00000495835 TMEM53Q6P2H8 277 aa20.91■□□□□ 0.94
HLA-C-209ENST00000495835 TREML1Q86YW5 311 aa20.91■□□□□ 0.94
HLA-C-209ENST00000495835 MRPL24Q96A35 216 aaKnown RBP20.91■□□□□ 0.94
HLA-C-209ENST00000495835 MYLK2Q9H1R3 596 aa20.91■□□□□ 0.94
HLA-C-209ENST00000495835 ABCD2Q9UBJ2 740 aa20.91■□□□□ 0.94
HLA-C-209ENST00000495835 SLC7A8Q9UHI5 535 aa20.91■□□□□ 0.94
HLA-C-209ENST00000495835 SONP18583 2426 aaKnown RBP20.9■□□□□ 0.94
HLA-C-209ENST00000495835 A8MV72 311 aaPredicted RBP20.9■□□□□ 0.94
HLA-C-209ENST00000495835 LY6HO94772 140 aa20.9■□□□□ 0.94
HLA-C-209ENST00000495835 GSK3BP49841 420 aa20.9■□□□□ 0.94
HLA-C-209ENST00000495835 LSM11P83369 360 aaKnown RBP eCLIP20.9■□□□□ 0.94
HLA-C-209ENST00000495835 PRKCDQ05655 676 aa20.9■□□□□ 0.94
HLA-C-209ENST00000495835 RAB39AQ14964 217 aa20.9■□□□□ 0.94
HLA-C-209ENST00000495835 LAPTM4AQ15012 233 aa20.9■□□□□ 0.94
HLA-C-209ENST00000495835 FXNQ16595 210 aa20.9■□□□□ 0.94
HLA-C-209ENST00000495835 ALG10Q5BKT4 473 aa20.9■□□□□ 0.94
HLA-C-209ENST00000495835 VTCN1Q7Z7D3 282 aa20.9■□□□□ 0.94
HLA-C-209ENST00000495835 PRIMA1Q86XR5 153 aa20.9■□□□□ 0.94
HLA-C-209ENST00000495835 HIPK1Q86Z02 1210 aa20.9■□□□□ 0.94
HLA-C-209ENST00000495835 SVOPLQ8N434 492 aa20.9■□□□□ 0.94
HLA-C-209ENST00000495835 ZNF347Q96SE7 839 aa20.9■□□□□ 0.94
HLA-C-209ENST00000495835 ELAC2Q9BQ52 826 aaKnown RBP20.9■□□□□ 0.94
HLA-C-209ENST00000495835 MS4A5Q9H3V2 200 aa20.9■□□□□ 0.94
HLA-C-209ENST00000495835 ANKRD19PQ9H560 264 aa20.9■□□□□ 0.94
HLA-C-209ENST00000495835 YAE1D1Q9NRH1 226 aa20.9■□□□□ 0.94
HLA-C-209ENST00000495835 TMEM160Q9NX00 188 aa20.9■□□□□ 0.94
HLA-C-209ENST00000495835 SYNGR3O43761 229 aa20.89■□□□□ 0.93
HLA-C-209ENST00000495835 ZNF682O95780 498 aa20.89■□□□□ 0.93
HLA-C-209ENST00000495835 IGHMP01871 453 aa20.89■□□□□ 0.93
HLA-C-209ENST00000495835 IFI30P13284 250 aa20.89■□□□□ 0.93
HLA-C-209ENST00000495835 NR4A2P43354 598 aa20.89■□□□□ 0.93
HLA-C-209ENST00000495835 SLC9A3P48764 834 aa20.89■□□□□ 0.93
HLA-C-209ENST00000495835 NUDT2P50583 147 aa20.89■□□□□ 0.93
HLA-C-209ENST00000495835 RUNX1T1Q06455 604 aa20.89■□□□□ 0.93
HLA-C-209ENST00000495835 C6orf52Q5T4I8 152 aa20.89■□□□□ 0.93
HLA-C-209ENST00000495835 GKAP1Q5VSY0 366 aaPredicted RBP20.89■□□□□ 0.93
HLA-C-209ENST00000495835 FAM205BPQ63HN1 556 aa20.89■□□□□ 0.93
HLA-C-209ENST00000495835 CYB5R2Q6BCY4 276 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms