RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 LRFN4Q6PJG9 635 aa13.91□□□□□ -0.18
PHF1-211ENST00000495509 SHFQ7M4L6 423 aa13.91□□□□□ -0.18
PHF1-211ENST00000495509 FAM57AQ8TBR7 257 aa13.91□□□□□ -0.18
PHF1-211ENST00000495509 SMAP2Q8WU79 429 aaPredicted RBP13.91□□□□□ -0.18
PHF1-211ENST00000495509 NMD3Q96D46 503 aaKnown RBP13.91□□□□□ -0.18
PHF1-211ENST00000495509 ZMYND19Q96E35 227 aaPredicted RBP13.91□□□□□ -0.18
PHF1-211ENST00000495509 RNFT2Q96EX2 444 aa13.91□□□□□ -0.18
PHF1-211ENST00000495509 DUSP21Q9H596 190 aa13.91□□□□□ -0.18
PHF1-211ENST00000495509 RNF122Q9H9V4 155 aa13.91□□□□□ -0.18
PHF1-211ENST00000495509 SCN3BQ9NY72 215 aa13.91□□□□□ -0.18
PHF1-211ENST00000495509 B9D1Q9UPM9 204 aa13.91□□□□□ -0.18
PHF1-211ENST00000495509 RPL36Q9Y3U8 105 aaKnown RBP13.91□□□□□ -0.18
PHF1-211ENST00000495509 ARHGAP21Q5T5U3 1957 aa13.9□□□□□ -0.18
PHF1-211ENST00000495509 TRIM64A6NGJ6 449 aa13.9□□□□□ -0.18
PHF1-211ENST00000495509 IGHG1P01857 330 aa13.9□□□□□ -0.18
PHF1-211ENST00000495509 YES1P07947 543 aa13.9□□□□□ -0.18
PHF1-211ENST00000495509 ATP6V1B1P15313 513 aa13.9□□□□□ -0.18
PHF1-211ENST00000495509 ABOP16442 354 aa13.9□□□□□ -0.18
PHF1-211ENST00000495509 GSTT1P30711 240 aa13.9□□□□□ -0.18
PHF1-211ENST00000495509 RPL5P46777 297 aaKnown RBP13.9□□□□□ -0.18
PHF1-211ENST00000495509 MTNR1AP48039 350 aa13.9□□□□□ -0.18
PHF1-211ENST00000495509 CSNK2BP67870 215 aa13.9□□□□□ -0.18
PHF1-211ENST00000495509 SLC35A2P78381 396 aa13.9□□□□□ -0.18
PHF1-211ENST00000495509 RNPS1Q15287 305 aaKnown RBP13.9□□□□□ -0.18
PHF1-211ENST00000495509 LINC01590Q5TEZ4 76 aa13.9□□□□□ -0.18
PHF1-211ENST00000495509 SEM1Q6ZVN7 128 aa13.9□□□□□ -0.18
PHF1-211ENST00000495509 AAED1Q7RTV5 226 aa13.9□□□□□ -0.18
PHF1-211ENST00000495509 NUFIP2Q7Z417 695 aaKnown RBP13.9□□□□□ -0.18
PHF1-211ENST00000495509 P4HA3Q7Z4N8 544 aa13.9□□□□□ -0.18
PHF1-211ENST00000495509 GID4Q8IVV7 300 aa13.9□□□□□ -0.18
PHF1-211ENST00000495509 MCEMP1Q8IX19 187 aa13.9□□□□□ -0.18
PHF1-211ENST00000495509 RPRMLQ8N4K4 120 aa13.9□□□□□ -0.18
PHF1-211ENST00000495509 C9orf106Q8NAJ2 232 aa13.9□□□□□ -0.18
PHF1-211ENST00000495509 OR4F15Q8NGB8 312 aa13.9□□□□□ -0.18
PHF1-211ENST00000495509 RFKQ969G6 155 aa13.9□□□□□ -0.18
PHF1-211ENST00000495509 LGALS12Q96DT0 336 aa13.9□□□□□ -0.18
PHF1-211ENST00000495509 ADAD1Q96M93 576 aaKnown RBP13.9□□□□□ -0.18
PHF1-211ENST00000495509 SNX18Q96RF0 628 aa13.9□□□□□ -0.18
PHF1-211ENST00000495509 BCO1Q9HAY6 547 aa13.9□□□□□ -0.18
PHF1-211ENST00000495509 FKBP14Q9NWM8 211 aa13.9□□□□□ -0.18
PHF1-211ENST00000495509 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.9□□□□□ -0.18
PHF1-211ENST00000495509 NOSIPQ9Y314 301 aaKnown RBP13.9□□□□□ -0.18
PHF1-211ENST00000495509 TPRKBQ9Y3C4 175 aa13.9□□□□□ -0.18
PHF1-211ENST00000495509 ZFYVE26Q68DK2 2539 aa13.9□□□□□ -0.18
PHF1-211ENST00000495509 CACNA1CQ13936 2221 aa13.9□□□□□ -0.18
PHF1-211ENST00000495509 INTS1Q8N201 2190 aaKnown RBP13.9□□□□□ -0.18
PHF1-211ENST00000495509 IGLV1-36A0A0B4J1U3 117 aa13.89□□□□□ -0.19
PHF1-211ENST00000495509 GPR171O14626 319 aa13.89□□□□□ -0.19
PHF1-211ENST00000495509 STSP08842 583 aa13.89□□□□□ -0.19
PHF1-211ENST00000495509 C21orf33P30042 268 aaPredicted RBP13.89□□□□□ -0.19
PHF1-211ENST00000495509 ST3GAL4Q11206 333 aa13.89□□□□□ -0.19
PHF1-211ENST00000495509 NFATC3Q12968 1075 aa13.89□□□□□ -0.19
PHF1-211ENST00000495509 HIST3H3Q16695 136 aa13.89□□□□□ -0.19
PHF1-211ENST00000495509 KCTD21Q4G0X4 260 aa13.89□□□□□ -0.19
PHF1-211ENST00000495509 ZBTB46Q86UZ6 589 aa13.89□□□□□ -0.19
PHF1-211ENST00000495509 GCNT2Q8N0V5 402 aa13.89□□□□□ -0.19
PHF1-211ENST00000495509 ZNF511Q8NB15 262 aa13.89□□□□□ -0.19
PHF1-211ENST00000495509 NOXO1Q8NFA2 376 aa13.89□□□□□ -0.19
PHF1-211ENST00000495509 PROKR2Q8NFJ6 384 aa13.89□□□□□ -0.19
PHF1-211ENST00000495509 TSPAN14Q8NG11 270 aa13.89□□□□□ -0.19
PHF1-211ENST00000495509 OR6K6Q8NGW6 343 aa13.89□□□□□ -0.19
PHF1-211ENST00000495509 NSMAFQ92636 917 aa13.89□□□□□ -0.19
PHF1-211ENST00000495509 COPS4Q9BT78 406 aa13.89□□□□□ -0.19
PHF1-211ENST00000495509 ALG12Q9BV10 488 aa13.89□□□□□ -0.19
PHF1-211ENST00000495509 YIPF3Q9GZM5 350 aa13.89□□□□□ -0.19
PHF1-211ENST00000495509 COA3Q9Y2R0 106 aaPredicted RBP13.89□□□□□ -0.19
PHF1-211ENST00000495509 FAM215AQ9Y5M1 114 aa13.89□□□□□ -0.19
PHF1-211ENST00000495509 ZNF724A8MTY0 619 aa13.88□□□□□ -0.19
PHF1-211ENST00000495509 MRPL3P09001 348 aaKnown RBP13.88□□□□□ -0.19
PHF1-211ENST00000495509 QDPRP09417 244 aa13.88□□□□□ -0.19
PHF1-211ENST00000495509 NSUN5P2Q63ZY6 315 aa13.88□□□□□ -0.19
PHF1-211ENST00000495509 GTF2IRD2BQ6EKJ0 949 aa13.88□□□□□ -0.19
PHF1-211ENST00000495509 GTF2IRD2Q86UP8 949 aa13.88□□□□□ -0.19
PHF1-211ENST00000495509 SATL1Q86VE3 508 aa13.88□□□□□ -0.19
PHF1-211ENST00000495509 DOLPP1Q86YN1 238 aa13.88□□□□□ -0.19
PHF1-211ENST00000495509 OR6N1Q8NGY5 312 aa13.88□□□□□ -0.19
PHF1-211ENST00000495509 OR2T4Q8NH00 348 aa13.88□□□□□ -0.19
PHF1-211ENST00000495509 WNT2BQ93097 391 aa13.88□□□□□ -0.19
PHF1-211ENST00000495509 TMEM54Q969K7 222 aa13.88□□□□□ -0.19
PHF1-211ENST00000495509 MCHR2Q969V1 340 aa13.88□□□□□ -0.19
PHF1-211ENST00000495509 ZNF837Q96EG3 531 aaPredicted RBP13.88□□□□□ -0.19
PHF1-211ENST00000495509 RBP7Q96R05 134 aa13.88□□□□□ -0.19
PHF1-211ENST00000495509 GLTPQ9NZD2 209 aa13.88□□□□□ -0.19
PHF1-211ENST00000495509 NDUFA13Q9P0J0 144 aa13.88□□□□□ -0.19
PHF1-211ENST00000495509 WARS2Q9UGM6 360 aaKnown RBP13.88□□□□□ -0.19
PHF1-211ENST00000495509 FOXD3Q9UJU5 478 aaPredicted RBP13.88□□□□□ -0.19
PHF1-211ENST00000495509 FKBP7Q9Y680 259 aa13.88□□□□□ -0.19
PHF1-211ENST00000495509 SMG1Q96Q15 3661 aaKnown RBP13.88□□□□□ -0.19
PHF1-211ENST00000495509 POLEQ07864 2286 aa13.88□□□□□ -0.19
PHF1-211ENST00000495509 TVP23AA6NH52 213 aa13.88□□□□□ -0.19
PHF1-211ENST00000495509 SLC22A31A6NKX4 558 aa13.88□□□□□ -0.19
PHF1-211ENST00000495509 SNTNA6NMZ2 147 aa13.88□□□□□ -0.19
PHF1-211ENST00000495509 M0R3G1 203 aa13.88□□□□□ -0.19
PHF1-211ENST00000495509 AHCYL1O43865 530 aa13.88□□□□□ -0.19
PHF1-211ENST00000495509 UPK3AO75631 287 aa13.88□□□□□ -0.19
PHF1-211ENST00000495509 GLCEO94923 617 aa13.88□□□□□ -0.19
PHF1-211ENST00000495509 MPZL1O95297 269 aa13.88□□□□□ -0.19
PHF1-211ENST00000495509 IGHV3-9P01782 118 aa13.88□□□□□ -0.19
PHF1-211ENST00000495509 TFAP2AP05549 437 aa13.88□□□□□ -0.19
PHF1-211ENST00000495509 CSNK1A1P48729 337 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms