RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 ZNF14P17017 642 aaPredicted RBP28.75■■■□□ 2.19
CBX4-203ENST00000494546 PCSK6P29122 969 aa28.75■■■□□ 2.19
CBX4-203ENST00000494546 DAG1Q14118 895 aa28.75■■■□□ 2.19
CBX4-203ENST00000494546 MEX3DQ86XN8 651 aaKnown RBP28.75■■■□□ 2.19
CBX4-203ENST00000494546 NRMQ8IXM6 262 aa28.75■■■□□ 2.19
CBX4-203ENST00000494546 OR10H5Q8NGA6 315 aa28.75■■■□□ 2.19
CBX4-203ENST00000494546 MCHR2Q969V1 340 aa28.75■■■□□ 2.19
CBX4-203ENST00000494546 ZNF75AQ96N20 296 aa28.75■■■□□ 2.19
CBX4-203ENST00000494546 VRK1Q99986 396 aaPredicted RBP28.75■■■□□ 2.19
CBX4-203ENST00000494546 ZNF442Q9H7R0 627 aa28.75■■■□□ 2.19
CBX4-203ENST00000494546 EGFL7Q9UHF1 273 aa28.75■■■□□ 2.19
CBX4-203ENST00000494546 TRMUO75648 421 aaKnown RBP28.74■■■□□ 2.19
CBX4-203ENST00000494546 TSPAN19P0C672 248 aa28.74■■■□□ 2.19
CBX4-203ENST00000494546 SAGP10523 405 aaPredicted RBP28.74■■■□□ 2.19
CBX4-203ENST00000494546 NPR2P20594 1047 aa28.74■■■□□ 2.19
CBX4-203ENST00000494546 SNTB2Q13425 540 aaKnown RBP28.74■■■□□ 2.19
CBX4-203ENST00000494546 EFNB3Q15768 340 aa28.74■■■□□ 2.19
CBX4-203ENST00000494546 ALG10Q5BKT4 473 aa28.74■■■□□ 2.19
CBX4-203ENST00000494546 RBM15BQ8NDT2 890 aaKnown RBP28.74■■■□□ 2.19
CBX4-203ENST00000494546 SORCS2Q96PQ0 1159 aa28.74■■■□□ 2.19
CBX4-203ENST00000494546 SH3GL3Q99963 347 aa28.74■■■□□ 2.19
CBX4-203ENST00000494546 MRPL13Q9BYD1 178 aaKnown RBP28.74■■■□□ 2.19
CBX4-203ENST00000494546 DENND2DQ9H6A0 471 aaPredicted RBP28.74■■■□□ 2.19
CBX4-203ENST00000494546 HTR3EA5X5Y0 456 aa28.73■■■□□ 2.19
CBX4-203ENST00000494546 ENTPD5O75356 428 aa28.73■■■□□ 2.19
CBX4-203ENST00000494546 FARS2O95363 451 aaKnown RBP28.73■■■□□ 2.19
CBX4-203ENST00000494546 MAKP20794 623 aa28.73■■■□□ 2.19
CBX4-203ENST00000494546 TOP3AQ13472 1001 aaPredicted RBP28.73■■■□□ 2.19
CBX4-203ENST00000494546 RAB39AQ14964 217 aa28.73■■■□□ 2.19
CBX4-203ENST00000494546 HIST3H3Q16695 136 aa28.73■■■□□ 2.19
CBX4-203ENST00000494546 ZNF730Q6ZMV8 503 aa28.73■■■□□ 2.19
CBX4-203ENST00000494546 RNF148Q8N7C7 305 aa28.73■■■□□ 2.19
CBX4-203ENST00000494546 FGFBP3Q8TAT2 258 aa28.73■■■□□ 2.19
CBX4-203ENST00000494546 FAM168AQ92567 244 aa28.73■■■□□ 2.19
CBX4-203ENST00000494546 PLK3Q9H4B4 646 aa28.73■■■□□ 2.19
CBX4-203ENST00000494546 STX18Q9P2W9 335 aaKnown RBP28.73■■■□□ 2.19
CBX4-203ENST00000494546 RPS6KA6Q9UK32 745 aa28.73■■■□□ 2.19
CBX4-203ENST00000494546 HIF3AQ9Y2N7 669 aa28.73■■■□□ 2.19
CBX4-203ENST00000494546 CSPG4Q6UVK1 2322 aa28.72■■■□□ 2.19
CBX4-203ENST00000494546 F12P00748 615 aaPredicted RBP28.72■■■□□ 2.19
CBX4-203ENST00000494546 ZNF84P51523 738 aa28.72■■■□□ 2.19
CBX4-203ENST00000494546 PPP2R2BQ00005 443 aa28.72■■■□□ 2.19
CBX4-203ENST00000494546 KRTAP1-1Q07627 177 aa28.72■■■□□ 2.19
CBX4-203ENST00000494546 ARMC4Q5T2S8 1044 aa28.72■■■□□ 2.19
CBX4-203ENST00000494546 CYP4Z1Q86W10 505 aa28.72■■■□□ 2.19
CBX4-203ENST00000494546 OR4K5Q8NGD3 323 aa28.72■■■□□ 2.19
CBX4-203ENST00000494546 SEPHS2Q99611 448 aa28.72■■■□□ 2.19
CBX4-203ENST00000494546 FKBP7Q9Y680 259 aa28.72■■■□□ 2.19
CBX4-203ENST00000494546 CENPBD1B2RD01 187 aa28.71■■■□□ 2.19
CBX4-203ENST00000494546 INAFM1C9JVW0 142 aa28.71■■■□□ 2.19
CBX4-203ENST00000494546 hCG_2039718K7EN88 272 aa28.71■■■□□ 2.19
CBX4-203ENST00000494546 NR4A1P22736 598 aa28.71■■■□□ 2.19
CBX4-203ENST00000494546 PRKCDQ05655 676 aa28.71■■■□□ 2.19
CBX4-203ENST00000494546 KRTAP21-3Q3LHN1 58 aa28.71■■■□□ 2.19
CBX4-203ENST00000494546 GLYATQ6IB77 296 aa28.71■■■□□ 2.19
CBX4-203ENST00000494546 SVOPLQ8N434 492 aa28.71■■■□□ 2.19
CBX4-203ENST00000494546 ANKS4BQ8N8V4 417 aa28.71■■■□□ 2.19
CBX4-203ENST00000494546 OR51A7Q8NH64 312 aa28.71■■■□□ 2.19
CBX4-203ENST00000494546 ACOT11Q8WXI4 607 aaPredicted RBP28.71■■■□□ 2.19
CBX4-203ENST00000494546 TXNIPQ9H3M7 391 aa28.71■■■□□ 2.19
CBX4-203ENST00000494546 FBXL3Q9UKT7 428 aa28.71■■■□□ 2.19
CBX4-203ENST00000494546 ENPP4Q9Y6X5 453 aa28.71■■■□□ 2.19
CBX4-203ENST00000494546 TRAV27A0A087WT01 109 aa28.7■■■□□ 2.18
CBX4-203ENST00000494546 EFCAB9A8MZ26 197 aa28.7■■■□□ 2.18
CBX4-203ENST00000494546 PRSS23O95084 383 aa28.7■■■□□ 2.18
CBX4-203ENST00000494546 TP53P04637 393 aaPredicted RBP28.7■■■□□ 2.18
CBX4-203ENST00000494546 ZNF35P13682 527 aa28.7■■■□□ 2.18
CBX4-203ENST00000494546 TBPL2Q6SJ96 375 aa28.7■■■□□ 2.18
CBX4-203ENST00000494546 IGFN1Q86VF2 1251 aa28.7■■■□□ 2.18
CBX4-203ENST00000494546 HDAC2Q92769 488 aaKnown RBP28.7■■■□□ 2.18
CBX4-203ENST00000494546 RNF121Q9H920 327 aa28.7■■■□□ 2.18
CBX4-203ENST00000494546 ARL2BPQ9Y2Y0 163 aa28.7■■■□□ 2.18
CBX4-203ENST00000494546 SPEF1Q9Y4P9 236 aa28.7■■■□□ 2.18
CBX4-203ENST00000494546 ZANQ9Y493 2812 aa28.7■■■□□ 2.18
CBX4-203ENST00000494546 ARFGEF3Q5TH69 2177 aa28.69■■■□□ 2.18
CBX4-203ENST00000494546 A0A087WUU8 490 aa28.69■■■□□ 2.18
CBX4-203ENST00000494546 GMNNO75496 209 aa28.69■■■□□ 2.18
CBX4-203ENST00000494546 CSF3P09919 207 aa28.69■■■□□ 2.18
CBX4-203ENST00000494546 GALK2Q01415 458 aa28.69■■■□□ 2.18
CBX4-203ENST00000494546 CDK20Q8IZL9 346 aa28.69■■■□□ 2.18
CBX4-203ENST00000494546 RNF113BQ8IZP6 322 aaKnown RBP28.69■■■□□ 2.18
CBX4-203ENST00000494546 FN1P02751 2386 aaKnown RBP28.68■■■□□ 2.18
CBX4-203ENST00000494546 NPIPB13A6NJU9 1138 aa28.68■■■□□ 2.18
CBX4-203ENST00000494546 NPIPB4C9JG80 1138 aa28.68■■■□□ 2.18
CBX4-203ENST00000494546 SLC2A10O95528 541 aa28.68■■■□□ 2.18
CBX4-203ENST00000494546 SERPINA5P05154 406 aa28.68■■■□□ 2.18
CBX4-203ENST00000494546 CTXN1P60606 82 aa28.68■■■□□ 2.18
CBX4-203ENST00000494546 CD47Q08722 323 aa28.68■■■□□ 2.18
CBX4-203ENST00000494546 GKAP1Q5VSY0 366 aaPredicted RBP28.68■■■□□ 2.18
CBX4-203ENST00000494546 TMEM53Q6P2H8 277 aa28.68■■■□□ 2.18
CBX4-203ENST00000494546 MBOAT2Q6ZWT7 520 aa28.68■■■□□ 2.18
CBX4-203ENST00000494546 RRM2BQ7LG56 351 aa28.68■■■□□ 2.18
CBX4-203ENST00000494546 SLC16A14Q7RTX9 510 aa28.68■■■□□ 2.18
CBX4-203ENST00000494546 TSEN54Q7Z6J9 526 aaKnown RBP28.68■■■□□ 2.18
CBX4-203ENST00000494546 OAFQ86UD1 273 aa28.68■■■□□ 2.18
CBX4-203ENST00000494546 ZNF584Q8IVC4 421 aa28.68■■■□□ 2.18
CBX4-203ENST00000494546 FAM156AQ8NDB6 213 aa28.68■■■□□ 2.18
CBX4-203ENST00000494546 OR13C2Q8NGS9 318 aa28.68■■■□□ 2.18
CBX4-203ENST00000494546 C10orf105Q8TEF2 133 aa28.68■■■□□ 2.18
CBX4-203ENST00000494546 TNFRSF13CQ96RJ3 184 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms