RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 NAXDQ8IW45 347 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 SLC35F2Q8IXU6 374 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 FAM71AQ8IYT1 594 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 RNF113BQ8IZP6 322 aaKnown RBP1.89□□□□□ -2.11
PTPN12-212ENST00000494248 CENPSQ8N2Z9 138 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 ELMOD1Q8N336 334 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 RIBC1Q8N443 379 aaPredicted RBP1.89□□□□□ -2.11
PTPN12-212ENST00000494248 C2orf73Q8N5S3 287 aaPredicted RBP1.89□□□□□ -2.11
PTPN12-212ENST00000494248 CPSF7Q8N684 471 aaKnown RBP1.89□□□□□ -2.11
PTPN12-212ENST00000494248 CCDC54Q8NEL0 328 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 LFNGQ8NES3 379 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 OR56A4Q8NGH8 313 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 OR13C5Q8NGS8 318 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 OR13J1Q8NGT2 312 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 FGFBP3Q8TAT2 258 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 PLPPR1Q8TBJ4 325 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 SPPL2AQ8TCT8 520 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 DYNC2LI1Q8TCX1 351 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 MCOLN3Q8TDD5 553 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 NEK7Q8TDX7 302 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 SMAP2Q8WU79 429 aaPredicted RBP1.89□□□□□ -2.11
PTPN12-212ENST00000494248 APH1BQ8WW43 257 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 NELFBQ8WX92 580 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 GTF3AQ92664 365 aaKnown RBP1.89□□□□□ -2.11
PTPN12-212ENST00000494248 UBE2E3Q969T4 207 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 PTH2Q96A98 100 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 PNPLA2Q96AD5 504 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 RPEQ96AT9 228 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 DGCR14Q96DF8 476 aaKnown RBP1.89□□□□□ -2.11
PTPN12-212ENST00000494248 OMA1Q96E52 524 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 CENPNQ96H22 339 aaPredicted RBP1.89□□□□□ -2.11
PTPN12-212ENST00000494248 ITCHQ96J02 903 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 C10orf90Q96M02 699 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 STACQ99469 402 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 RBBP8Q99708 897 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 ATP5SQ99766 215 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 SLC6A7Q99884 636 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 NIPSNAP1Q9BPW8 284 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 NIPSNAP3BQ9BS92 247 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 BCL2L14Q9BZR8 327 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 ZYG11BQ9C0D3 744 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 ACTR3CQ9C0K3 210 aaPredicted RBP1.89□□□□□ -2.11
PTPN12-212ENST00000494248 FAM107BQ9H098 131 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 COMMD4Q9H0A8 199 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 ING2Q9H160 280 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 NXF5Q9H1B4 397 aaKnown RBP1.89□□□□□ -2.11
PTPN12-212ENST00000494248 NEUROG2Q9H2A3 272 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 ARRDC1-AS1Q9H2J1 176 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 PPA2Q9H2U2 334 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 OR51B5Q9H339 312 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 OR51M1Q9H341 326 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 ASB7Q9H672 318 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 TLE6Q9H808 572 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 GPN2Q9H9Y4 310 aaPredicted RBP1.89□□□□□ -2.11
PTPN12-212ENST00000494248 POPDC2Q9HBU9 364 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 XPNPEP1Q9NQW7 623 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 GDF3Q9NR23 364 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 SLC2A9Q9NRM0 540 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 DCAF13Q9NV06 445 aaKnown RBP1.89□□□□□ -2.11
PTPN12-212ENST00000494248 RNF186Q9NXI6 227 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 SIGLEC8Q9NYZ4 499 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 BFARQ9NZS9 450 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 VAPAQ9P0L0 249 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 ZDHHC2Q9UIJ5 367 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 PURGQ9UJV8 347 aaKnown RBP1.89□□□□□ -2.11
PTPN12-212ENST00000494248 RALYQ9UKM9 306 aaKnown RBP1.89□□□□□ -2.11
PTPN12-212ENST00000494248 FBXL3Q9UKT7 428 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 GUCA1BQ9UMX6 200 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 TFR2Q9UP52 801 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 SLC17A4Q9Y2C5 497 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 YARS2Q9Y2Z4 477 aaKnown RBP1.89□□□□□ -2.11
PTPN12-212ENST00000494248 SPIN1Q9Y657 262 aaPredicted RBP1.89□□□□□ -2.11
PTPN12-212ENST00000494248 STYXL1Q9Y6J8 313 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 PRAG1Q86YV5 1406 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 GREB1LQ9C091 1923 aaPredicted RBP1.89□□□□□ -2.11
PTPN12-212ENST00000494248 AGRNO00468 2067 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 PDS5AQ29RF7 1337 aaKnown RBP1.89□□□□□ -2.11
PTPN12-212ENST00000494248 CCDC171Q6TFL3 1326 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 UBN2Q6ZU65 1347 aa1.89□□□□□ -2.11
PTPN12-212ENST00000494248 ZNF318Q5VUA4 2279 aa1.88□□□□□ -2.11
PTPN12-212ENST00000494248 CEMIPQ8WUJ3 1361 aa1.88□□□□□ -2.11
PTPN12-212ENST00000494248 KIAA0232Q92628 1395 aa1.88□□□□□ -2.11
PTPN12-212ENST00000494248 A0A1B0GUS0 222 aa1.88□□□□□ -2.11
PTPN12-212ENST00000494248 A0A1W2PR80 420 aa1.88□□□□□ -2.11
PTPN12-212ENST00000494248 A6NIZ1 184 aa1.88□□□□□ -2.11
PTPN12-212ENST00000494248 NKX6-3A6NJ46 265 aa1.88□□□□□ -2.11
PTPN12-212ENST00000494248 FAM74A7A6NL05 159 aa1.88□□□□□ -2.11
PTPN12-212ENST00000494248 VSTM2BA6NLU5 285 aa1.88□□□□□ -2.11
PTPN12-212ENST00000494248 ZNF729A6NN14 1252 aaPredicted RBP1.88□□□□□ -2.11
PTPN12-212ENST00000494248 SRRM4A7MD48 611 aaKnown RBP1.88□□□□□ -2.11
PTPN12-212ENST00000494248 PP2D1A8MPX8 630 aa1.88□□□□□ -2.11
PTPN12-212ENST00000494248 H0Y980 276 aa1.88□□□□□ -2.11
PTPN12-212ENST00000494248 H3BMH7 237 aa1.88□□□□□ -2.11
PTPN12-212ENST00000494248 hCG_2039718K7EN88 272 aa1.88□□□□□ -2.11
PTPN12-212ENST00000494248 M0QZ92 97 aa1.88□□□□□ -2.11
PTPN12-212ENST00000494248 CCL24O00175 119 aa1.88□□□□□ -2.11
PTPN12-212ENST00000494248 LAD1O00515 517 aa1.88□□□□□ -2.11
PTPN12-212ENST00000494248 GAPDHSO14556 408 aaPredicted RBP1.88□□□□□ -2.11
PTPN12-212ENST00000494248 ZNF195O14628 629 aa1.88□□□□□ -2.11
PTPN12-212ENST00000494248 BIRC5O15392 142 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms