RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 IGFBP7Q16270 282 aa2.11□□□□□ -2.07
ITGB1-216ENST00000493758 CCDC92Q53HC0 331 aaPredicted RBP2.11□□□□□ -2.07
ITGB1-216ENST00000493758 HES5Q5TA89 166 aa2.11□□□□□ -2.07
ITGB1-216ENST00000493758 CNIH2Q6PI25 160 aa2.11□□□□□ -2.07
ITGB1-216ENST00000493758 SLC25A48Q6ZT89 311 aaKnown RBP2.11□□□□□ -2.07
ITGB1-216ENST00000493758 ECHDC2Q86YB7 292 aa2.11□□□□□ -2.07
ITGB1-216ENST00000493758 SDR42E1Q8WUS8 393 aa2.11□□□□□ -2.07
ITGB1-216ENST00000493758 COPS8Q99627 209 aa2.11□□□□□ -2.07
ITGB1-216ENST00000493758 SH3GL1Q99961 368 aa2.11□□□□□ -2.07
ITGB1-216ENST00000493758 SPNS1Q9H2V7 528 aa2.11□□□□□ -2.07
ITGB1-216ENST00000493758 AZI2Q9H6S1 392 aa2.11□□□□□ -2.07
ITGB1-216ENST00000493758 HMG20AQ9NP66 347 aa2.11□□□□□ -2.07
ITGB1-216ENST00000493758 ADAM28Q9UKQ2 775 aa2.11□□□□□ -2.07
ITGB1-216ENST00000493758 CENPJQ9HC77 1338 aaPredicted RBP2.11□□□□□ -2.07
ITGB1-216ENST00000493758 ATP10AO60312 1499 aa2.1□□□□□ -2.07
ITGB1-216ENST00000493758 IGLV1-50A0A075B6I6 118 aa2.1□□□□□ -2.07
ITGB1-216ENST00000493758 BICDL2A1A5D9 508 aa2.1□□□□□ -2.07
ITGB1-216ENST00000493758 TOM1O60784 492 aa2.1□□□□□ -2.07
ITGB1-216ENST00000493758 OR7A10O76100 309 aa2.1□□□□□ -2.07
ITGB1-216ENST00000493758 LINC00869P0C866 280 aa2.1□□□□□ -2.07
ITGB1-216ENST00000493758 CD1CP29017 333 aa2.1□□□□□ -2.07
ITGB1-216ENST00000493758 HSD17B2P37059 387 aa2.1□□□□□ -2.07
ITGB1-216ENST00000493758 OGDHQ02218 1023 aa2.1□□□□□ -2.07
ITGB1-216ENST00000493758 ZNF92Q03936 586 aa2.1□□□□□ -2.07
ITGB1-216ENST00000493758 LOXL1Q08397 574 aaPredicted RBP2.1□□□□□ -2.07
ITGB1-216ENST00000493758 ZNF493Q6ZR52 646 aa2.1□□□□□ -2.07
ITGB1-216ENST00000493758 TMEM179Q6ZVK1 233 aa2.1□□□□□ -2.07
ITGB1-216ENST00000493758 DHDDSQ86SQ9 333 aa2.1□□□□□ -2.07
ITGB1-216ENST00000493758 LRRC75A-AS1Q8N1F1 130 aa2.1□□□□□ -2.07
ITGB1-216ENST00000493758 RPRD1AQ96P16 312 aaPredicted RBP2.1□□□□□ -2.07
ITGB1-216ENST00000493758 MS4A4EQ96PG1 132 aa2.1□□□□□ -2.07
ITGB1-216ENST00000493758 MCCC2Q9HCC0 563 aa2.1□□□□□ -2.07
ITGB1-216ENST00000493758 A0A1W2PPE3 182 aa2.09□□□□□ -2.07
ITGB1-216ENST00000493758 TMEM223A0PJW6 202 aa2.09□□□□□ -2.07
ITGB1-216ENST00000493758 RRP8O43159 456 aaKnown RBP2.09□□□□□ -2.07
ITGB1-216ENST00000493758 RBFOX2O43251 390 aaKnown RBP eCLIP2.09□□□□□ -2.07
ITGB1-216ENST00000493758 C2P06681 752 aa2.09□□□□□ -2.07
ITGB1-216ENST00000493758 RNASE2P10153 161 aaKnown RBP2.09□□□□□ -2.07
ITGB1-216ENST00000493758 RORAP35398 523 aa2.09□□□□□ -2.07
ITGB1-216ENST00000493758 RAP1AP62834 184 aa2.09□□□□□ -2.07
ITGB1-216ENST00000493758 CACNG7P62955 275 aa2.09□□□□□ -2.07
ITGB1-216ENST00000493758 MRPL28Q13084 256 aaKnown RBP2.09□□□□□ -2.07
ITGB1-216ENST00000493758 ZNF77Q15935 545 aa2.09□□□□□ -2.07
ITGB1-216ENST00000493758 ABHD13Q7L211 337 aa2.09□□□□□ -2.07
ITGB1-216ENST00000493758 ZSCAN30Q86W11 494 aa2.09□□□□□ -2.07
ITGB1-216ENST00000493758 PUSL1Q8N0Z8 303 aaKnown RBP2.09□□□□□ -2.07
ITGB1-216ENST00000493758 GATSQ8NAP1 163 aa2.09□□□□□ -2.07
ITGB1-216ENST00000493758 SYNPRQ8TBG9 265 aa2.09□□□□□ -2.07
ITGB1-216ENST00000493758 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.09□□□□□ -2.07
ITGB1-216ENST00000493758 RMI2Q96E14 147 aa2.09□□□□□ -2.07
ITGB1-216ENST00000493758 PSKH2Q96QS6 385 aa2.09□□□□□ -2.07
ITGB1-216ENST00000493758 UBE2ZQ9H832 354 aaPredicted RBP2.09□□□□□ -2.07
ITGB1-216ENST00000493758 NMRAL1Q9HBL8 299 aa2.09□□□□□ -2.07
ITGB1-216ENST00000493758 PALMDQ9NP74 551 aa2.09□□□□□ -2.07
ITGB1-216ENST00000493758 EPS15L1Q9UBC2 864 aa2.09□□□□□ -2.07
ITGB1-216ENST00000493758 PSG8Q9UQ74 426 aa2.09□□□□□ -2.07
ITGB1-216ENST00000493758 IGLV3-12A0A075B6K2 115 aa2.08□□□□□ -2.08
ITGB1-216ENST00000493758 CLRN2A0PK11 232 aa2.08□□□□□ -2.08
ITGB1-216ENST00000493758 RPL36A-HNRNPH2H7BZ11 118 aa2.08□□□□□ -2.08
ITGB1-216ENST00000493758 SNNO75324 88 aaPredicted RBP2.08□□□□□ -2.08
ITGB1-216ENST00000493758 SLC25A14O95258 325 aaPredicted RBP2.08□□□□□ -2.08
ITGB1-216ENST00000493758 SSR1P43307 286 aaKnown RBP2.08□□□□□ -2.08
ITGB1-216ENST00000493758 FBXW4P57775 412 aa2.08□□□□□ -2.08
ITGB1-216ENST00000493758 POLR2FP61218 127 aaKnown RBP2.08□□□□□ -2.08
ITGB1-216ENST00000493758 ARG2P78540 354 aa2.08□□□□□ -2.08
ITGB1-216ENST00000493758 FGL1Q08830 312 aa2.08□□□□□ -2.08
ITGB1-216ENST00000493758 KLHL30Q0D2K2 578 aa2.08□□□□□ -2.08
ITGB1-216ENST00000493758 POU2AF1Q16633 256 aa2.08□□□□□ -2.08
ITGB1-216ENST00000493758 ATAD3BQ5T9A4 648 aa2.08□□□□□ -2.08
ITGB1-216ENST00000493758 KDM7AQ6ZMT4 941 aa2.08□□□□□ -2.08
ITGB1-216ENST00000493758 OR5D13Q8NGL4 314 aa2.08□□□□□ -2.08
ITGB1-216ENST00000493758 ABHD3Q8WU67 409 aa2.08□□□□□ -2.08
ITGB1-216ENST00000493758 TMEM54Q969K7 222 aa2.08□□□□□ -2.08
ITGB1-216ENST00000493758 C10orf35Q96D05 121 aa2.08□□□□□ -2.08
ITGB1-216ENST00000493758 TMEM43Q9BTV4 400 aa2.08□□□□□ -2.08
ITGB1-216ENST00000493758 PPA2Q9H2U2 334 aa2.08□□□□□ -2.08
ITGB1-216ENST00000493758 C12orf10Q9HB07 376 aa2.08□□□□□ -2.08
ITGB1-216ENST00000493758 CDH9Q9ULB4 789 aa2.08□□□□□ -2.08
ITGB1-216ENST00000493758 ATP6V0A2Q9Y487 856 aa2.08□□□□□ -2.08
ITGB1-216ENST00000493758 PEX16Q9Y5Y5 336 aa2.08□□□□□ -2.08
ITGB1-216ENST00000493758 S4R3C0 116 aa2.08□□□□□ -2.08
ITGB1-216ENST00000493758 MSH6P52701 1360 aa2.08□□□□□ -2.08
ITGB1-216ENST00000493758 A0A1W2PPV9 198 aa2.07□□□□□ -2.08
ITGB1-216ENST00000493758 GOLGA8SH3BPF8 625 aa2.07□□□□□ -2.08
ITGB1-216ENST00000493758 CCL21O00585 134 aa2.07□□□□□ -2.08
ITGB1-216ENST00000493758 KRTAP5-8O75690 187 aa2.07□□□□□ -2.08
ITGB1-216ENST00000493758 C1orf105O95561 183 aa2.07□□□□□ -2.08
ITGB1-216ENST00000493758 TSPAN12O95859 305 aa2.07□□□□□ -2.08
ITGB1-216ENST00000493758 ADRA2AP08913 450 aa2.07□□□□□ -2.08
ITGB1-216ENST00000493758 PRPS2P11908 318 aa2.07□□□□□ -2.08
ITGB1-216ENST00000493758 AK4P27144 223 aaPredicted RBP2.07□□□□□ -2.08
ITGB1-216ENST00000493758 SERPINB5P36952 375 aa2.07□□□□□ -2.08
ITGB1-216ENST00000493758 ZNF816Q0VGE8 651 aaPredicted RBP2.07□□□□□ -2.08
ITGB1-216ENST00000493758 PRPSAP1Q14558 356 aa2.07□□□□□ -2.08
ITGB1-216ENST00000493758 H2BFWTQ7Z2G1 175 aa2.07□□□□□ -2.08
ITGB1-216ENST00000493758 EFL1Q7Z2Z2 1120 aaKnown RBP2.07□□□□□ -2.08
ITGB1-216ENST00000493758 HDDC2Q7Z4H3 204 aa2.07□□□□□ -2.08
ITGB1-216ENST00000493758 LHFPL3Q86UP9 236 aa2.07□□□□□ -2.08
ITGB1-216ENST00000493758 CEP112Q8N8E3 955 aa2.07□□□□□ -2.08
ITGB1-216ENST00000493758 OR52P1PQ8NH57 321 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms